RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W SNU23Q12368 194 aaPredicted RBP1.53□□□□□ -2.16
SPE1YKL184W CHC1P22137 1653 aaKnown RBP1.53□□□□□ -2.17
SPE1YKL184W RAD10P06838 210 aa1.52□□□□□ -2.17
SPE1YKL184W DPB2P24482 689 aaPredicted RBP1.52□□□□□ -2.17
SPE1YKL184W SFC1P33303 322 aa1.52□□□□□ -2.17
SPE1YKL184W MRPL39P36533 70 aa1.52□□□□□ -2.17
SPE1YKL184W VMR1P38735 1592 aa1.52□□□□□ -2.17
SPE1YKL184W YER084WP40057 128 aa1.52□□□□□ -2.17
SPE1YKL184W FMC1P40491 155 aa1.52□□□□□ -2.17
SPE1YKL184W SNZ3P43545 298 aa1.52□□□□□ -2.17
SPE1YKL184W GLG2P47011 380 aa1.52□□□□□ -2.17
SPE1YKL184W AAH1P53909 347 aa1.52□□□□□ -2.17
SPE1YKL184W FEX1Q08913 375 aa1.52□□□□□ -2.17
SPE1YKL184W FEX2Q08991 375 aa1.52□□□□□ -2.17
SPE1YKL184W ATG31Q12421 196 aa1.52□□□□□ -2.17
SPE1YKL184W DNF3Q12674 1656 aa1.52□□□□□ -2.17
SPE1YKL184W PDR5P33302 1511 aaKnown RBP1.52□□□□□ -2.17
SPE1YKL184W SWI1P09547 1314 aa1.52□□□□□ -2.17
SPE1YKL184W HOM6P31116 359 aaKnown RBP1.51□□□□□ -2.17
SPE1YKL184W RNP1P32385 249 aa1.51□□□□□ -2.17
SPE1YKL184W CAB3P36076 571 aa1.51□□□□□ -2.17
SPE1YKL184W MRX3P38172 270 aa1.51□□□□□ -2.17
SPE1YKL184W LDB7P38210 180 aa1.51□□□□□ -2.17
SPE1YKL184W FZO1P38297 855 aa1.51□□□□□ -2.17
SPE1YKL184W SPT8P38915 602 aa1.51□□□□□ -2.17
SPE1YKL184W PIR5P46999 287 aa1.51□□□□□ -2.17
SPE1YKL184W SYF2P53277 215 aaPredicted RBP1.51□□□□□ -2.17
SPE1YKL184W SNZ2P53824 298 aa1.51□□□□□ -2.17
SPE1YKL184W EMI1Q04406 187 aa1.51□□□□□ -2.17
SPE1YKL184W RRP40Q08285 240 aaKnown RBP1.51□□□□□ -2.17
SPE1YKL184W SNF8Q12483 233 aa1.51□□□□□ -2.17
SPE1YKL184W TRM3Q07527 1436 aa1.51□□□□□ -2.17
SPE1YKL184W HIS3P06633 220 aa1.5□□□□□ -2.17
SPE1YKL184W YKR104WP0CE69 306 aa1.5□□□□□ -2.17
SPE1YKL184W COS2P0CX12 379 aa1.5□□□□□ -2.17
SPE1YKL184W COS3P0CX13 379 aa1.5□□□□□ -2.17
SPE1YKL184W MATALPHA1P0CY06 175 aa1.5□□□□□ -2.17
SPE1YKL184W HMLALPHA1P0CY07 175 aa1.5□□□□□ -2.17
SPE1YKL184W YAP3P38749 330 aa1.5□□□□□ -2.17
SPE1YKL184W BFR1P38934 470 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SPE1YKL184W MNN5P46982 586 aa1.5□□□□□ -2.17
SPE1YKL184W JHD2P47156 728 aaPredicted RBP1.5□□□□□ -2.17
SPE1YKL184W OST3P48439 350 aa1.5□□□□□ -2.17
SPE1YKL184W SSU72P53538 206 aaPredicted RBP1.5□□□□□ -2.17
SPE1YKL184W SRL4Q03085 281 aa1.5□□□□□ -2.17
SPE1YKL184W GOT1Q03554 138 aa1.5□□□□□ -2.17
SPE1YKL184W YCT1Q12235 531 aa1.5□□□□□ -2.17
SPE1YKL184W GCN2P15442 1659 aa1.5□□□□□ -2.17
SPE1YKL184W RAD9P14737 1309 aa1.5□□□□□ -2.17
SPE1YKL184W ZWF1P11412 505 aaKnown RBP1.49□□□□□ -2.17
SPE1YKL184W YBR096WP38256 230 aa1.49□□□□□ -2.17
SPE1YKL184W GOS1P38736 223 aa1.49□□□□□ -2.17
SPE1YKL184W TEM1P38987 245 aa1.49□□□□□ -2.17
SPE1YKL184W GON7P46984 123 aa1.49□□□□□ -2.17
SPE1YKL184W MDM34P53083 459 aa1.49□□□□□ -2.17
SPE1YKL184W SPG4Q04438 115 aa1.49□□□□□ -2.17
SPE1YKL184W YDR124WQ04608 324 aa1.49□□□□□ -2.17
SPE1YKL184W RDS3Q06835 107 aaPredicted RBP1.49□□□□□ -2.17
SPE1YKL184W COQ10Q08058 207 aa1.49□□□□□ -2.17
SPE1YKL184W BBP1Q12365 385 aa1.49□□□□□ -2.17
SPE1YKL184W GEP5Q12393 293 aa1.49□□□□□ -2.17
SPE1YKL184W YPL247CQ12523 523 aa1.49□□□□□ -2.17
SPE1YKL184W TY3B-IQ7LHG5 1498 aaKnown RBP1.49□□□□□ -2.17
SPE1YKL184W IML1P47170 1584 aa1.49□□□□□ -2.17
SPE1YKL184W TOM40P23644 387 aaKnown RBP1.49□□□□□ -2.17
SPE1YKL184W TCD1P38756 429 aa1.49□□□□□ -2.17
SPE1YKL184W MED6P38782 295 aa1.49□□□□□ -2.17
SPE1YKL184W YHR127WP38833 243 aaKnown RBP1.49□□□□□ -2.17
SPE1YKL184W HOC1P47124 396 aa1.49□□□□□ -2.17
SPE1YKL184W YJR079WP47126 109 aa1.49□□□□□ -2.17
SPE1YKL184W YGL034CP53186 121 aa1.49□□□□□ -2.17
SPE1YKL184W GRH1Q04410 372 aaKnown RBP1.49□□□□□ -2.17
SPE1YKL184W FCF1Q05498 189 aaPredicted RBP1.49□□□□□ -2.17
SPE1YKL184W CSM4Q08955 156 aa1.49□□□□□ -2.17
SPE1YKL184W YLR126CQ12288 251 aa1.49□□□□□ -2.17
SPE1YKL184W AGC1Q12482 902 aa1.49□□□□□ -2.17
SPE1YKL184W NUP192P47054 1683 aa1.48□□□□□ -2.17
SPE1YKL184W YLR419WQ06698 1435 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W NUP188P52593 1655 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W SEC22P22214 214 aa1.48□□□□□ -2.17
SPE1YKL184W EHD3P28817 500 aa1.48□□□□□ -2.17
SPE1YKL184W BMH2P34730 273 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W DRE2P36152 348 aa1.48□□□□□ -2.17
SPE1YKL184W YHB1P39676 399 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W THO1P40040 218 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W YMR144WP40214 342 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W YJR141WP47172 347 aaPredicted RBP1.48□□□□□ -2.17
SPE1YKL184W KRE28Q04431 385 aa1.48□□□□□ -2.17
SPE1YKL184W YMR114CQ04471 368 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W SMT3Q12306 101 aaKnown RBP1.48□□□□□ -2.17
SPE1YKL184W BCK1Q01389 1478 aa1.47□□□□□ -2.17
SPE1YKL184W KRE5P22023 1365 aa1.47□□□□□ -2.17
SPE1YKL184W IPP1P00817 287 aaKnown RBP1.47□□□□□ -2.17
SPE1YKL184W RHO1P06780 209 aaKnown RBP1.47□□□□□ -2.17
SPE1YKL184W MRPL25P23369 157 aa1.47□□□□□ -2.17
SPE1YKL184W GDH2P33327 1092 aaKnown RBP1.47□□□□□ -2.17
SPE1YKL184W ECM13P38195 257 aa1.47□□□□□ -2.17
SPE1YKL184W CUE1P38428 203 aa1.47□□□□□ -2.17
SPE1YKL184W YER085CP40058 173 aa1.47□□□□□ -2.17
SPE1YKL184W RTR1P40084 226 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms