RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeastyeast

Gene LSO1, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSO1YJR005C-A ARO9P38840 513 aaPredicted RBP3.91□□□□□ -1.78
LSO1YJR005C-A BFR1P38934 470 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
LSO1YJR005C-A PUG1P40100 303 aa3.91□□□□□ -1.78
LSO1YJR005C-A GNA1P43577 159 aaPredicted RBP3.91□□□□□ -1.78
LSO1YJR005C-A CTK2P46962 323 aa3.91□□□□□ -1.78
LSO1YJR005C-A AVT4P50944 713 aa3.91□□□□□ -1.78
LSO1YJR005C-A YGL159WP53110 370 aa3.91□□□□□ -1.78
LSO1YJR005C-A HOL1P53389 586 aa3.91□□□□□ -1.78
LSO1YJR005C-A DID2P69771 204 aa3.91□□□□□ -1.78
LSO1YJR005C-A PRM15Q03262 622 aa3.91□□□□□ -1.78
LSO1YJR005C-A YOR385WQ08909 290 aa3.91□□□□□ -1.78
LSO1YJR005C-A FEX2Q08991 375 aa3.91□□□□□ -1.78
LSO1YJR005C-A MCT1Q12283 360 aa3.91□□□□□ -1.78
LSO1YJR005C-A YDL180WQ12301 547 aa3.91□□□□□ -1.78
LSO1YJR005C-A FMP16Q12497 93 aa3.91□□□□□ -1.78
LSO1YJR005C-A YGL194C-AQ2V2P6 80 aa3.91□□□□□ -1.78
LSO1YJR005C-A PET20Q99373 253 aa3.91□□□□□ -1.78
LSO1YJR005C-A RPL40AP0CH08 128 aaKnown RBP3.9□□□□□ -1.79
LSO1YJR005C-A RPL40BP0CH09 128 aaKnown RBP3.9□□□□□ -1.79
LSO1YJR005C-A PCL1P24867 279 aa3.9□□□□□ -1.79
LSO1YJR005C-A PPZ2P33329 710 aa3.9□□□□□ -1.79
LSO1YJR005C-A SER3P40054 469 aa3.9□□□□□ -1.79
LSO1YJR005C-A YMR144WP40214 342 aaKnown RBP3.9□□□□□ -1.79
LSO1YJR005C-A YIL169CP40442 995 aa3.9□□□□□ -1.79
LSO1YJR005C-A YIL060WP40519 144 aa3.9□□□□□ -1.79
LSO1YJR005C-A UBP8P50102 471 aa3.9□□□□□ -1.79
LSO1YJR005C-A OKP1P53298 406 aa3.9□□□□□ -1.79
LSO1YJR005C-A ATG4P53867 494 aa3.9□□□□□ -1.79
LSO1YJR005C-A ALG9P53868 555 aaKnown RBP3.9□□□□□ -1.79
LSO1YJR005C-A YDR387CQ04162 555 aa3.9□□□□□ -1.79
LSO1YJR005C-A COQ11Q05892 277 aa3.9□□□□□ -1.79
LSO1YJR005C-A MRX9Q07349 420 aaKnown RBP3.9□□□□□ -1.79
LSO1YJR005C-A MED4Q12343 284 aa3.9□□□□□ -1.79
LSO1YJR005C-A FLO9P39712 1322 aa3.9□□□□□ -1.79
LSO1YJR005C-A SEC16P48415 2195 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A YLR358CO13565 187 aa3.89□□□□□ -1.79
LSO1YJR005C-A TDH3P00359 332 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
LSO1YJR005C-A REP2P03872 296 aa3.89□□□□□ -1.79
LSO1YJR005C-A RPS16AP0CX51 143 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A RPS16BP0CX52 143 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A HNM1P19807 563 aa3.89□□□□□ -1.79
LSO1YJR005C-A CKS1P20486 150 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A SEC62P21825 274 aa3.89□□□□□ -1.79
LSO1YJR005C-A ARO4P32449 370 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A FMT1P32785 401 aa3.89□□□□□ -1.79
LSO1YJR005C-A MRPL27P36526 146 aaPredicted RBP3.89□□□□□ -1.79
LSO1YJR005C-A MRPL39P36533 70 aa3.89□□□□□ -1.79
LSO1YJR005C-A POP8P38208 133 aa3.89□□□□□ -1.79
LSO1YJR005C-A FIG1P38224 298 aa3.89□□□□□ -1.79
LSO1YJR005C-A RPS26AP39938 119 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A RPS26BP39939 119 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A YIR035CP40579 254 aa3.89□□□□□ -1.79
LSO1YJR005C-A BUD8P41698 603 aa3.89□□□□□ -1.79
LSO1YJR005C-A YJR011CP47086 261 aaPredicted RBP3.89□□□□□ -1.79
LSO1YJR005C-A TYW3P53177 273 aa3.89□□□□□ -1.79
LSO1YJR005C-A PCP1P53259 346 aa3.89□□□□□ -1.79
LSO1YJR005C-A HRI1Q05905 244 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A USB1Q12208 290 aaKnown RBP3.89□□□□□ -1.79
LSO1YJR005C-A ISA2Q12425 185 aa3.89□□□□□ -1.79
LSO1YJR005C-A YJR112W-AQ3E743 109 aa3.89□□□□□ -1.79
LSO1YJR005C-A UBA3Q99344 299 aa3.89□□□□□ -1.79
LSO1YJR005C-A COX5BP00425 151 aa3.88□□□□□ -1.79
LSO1YJR005C-A RIP1P08067 215 aa3.88□□□□□ -1.79
LSO1YJR005C-A YLL053CP0CD98 152 aa3.88□□□□□ -1.79
LSO1YJR005C-A RPL35AP0CX84 120 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A RPL35BP0CX85 120 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A RPL30P14120 105 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A RFA1P22336 621 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A DBP2P24783 546 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A YCR061WP25639 631 aa3.88□□□□□ -1.79
LSO1YJR005C-A TIP1P27654 210 aaPredicted RBP3.88□□□□□ -1.79
LSO1YJR005C-A DEG1P31115 442 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A VAM7P32912 316 aa3.88□□□□□ -1.79
LSO1YJR005C-A NAT2P37293 288 aa3.88□□□□□ -1.79
LSO1YJR005C-A MGE1P38523 228 aa3.88□□□□□ -1.79
LSO1YJR005C-A LAG1P38703 411 aa3.88□□□□□ -1.79
LSO1YJR005C-A GEP4P38812 185 aa3.88□□□□□ -1.79
LSO1YJR005C-A PTI1P39927 425 aaPredicted RBP3.88□□□□□ -1.79
LSO1YJR005C-A YND1P40009 630 aa3.88□□□□□ -1.79
LSO1YJR005C-A YER158CP40095 573 aa3.88□□□□□ -1.79
LSO1YJR005C-A SEC24P40482 926 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A BMT5P40493 336 aa3.88□□□□□ -1.79
LSO1YJR005C-A RPS0BP46654 252 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A PHB2P50085 310 aa3.88□□□□□ -1.79
LSO1YJR005C-A TNA1P53322 534 aa3.88□□□□□ -1.79
LSO1YJR005C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
LSO1YJR005C-A NOC4Q06512 552 aaPredicted RBP3.88□□□□□ -1.79
LSO1YJR005C-A RFU1Q08003 200 aa3.88□□□□□ -1.79
LSO1YJR005C-A YOL024WQ08172 172 aa3.88□□□□□ -1.79
LSO1YJR005C-A SCP1Q08873 200 aa3.88□□□□□ -1.79
LSO1YJR005C-A GRE1Q08969 168 aa3.88□□□□□ -1.79
LSO1YJR005C-A FCF2Q12035 217 aaPredicted RBP3.88□□□□□ -1.79
LSO1YJR005C-A VAM3Q12241 283 aa3.88□□□□□ -1.79
LSO1YJR005C-A IZH2Q12442 317 aa3.88□□□□□ -1.79
LSO1YJR005C-A HUT1Q12520 339 aa3.88□□□□□ -1.79
LSO1YJR005C-A CDC39P25655 2108 aaKnown RBP3.88□□□□□ -1.79
LSO1YJR005C-A YBR085C-AO43137 85 aa3.87□□□□□ -1.79
LSO1YJR005C-A TPI1P00942 248 aaKnown RBP3.87□□□□□ -1.79
LSO1YJR005C-A AAC1P04710 309 aa3.87□□□□□ -1.79
LSO1YJR005C-A RPL7AP05737 244 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms