RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YJR079WP47126 109 aa1.49□□□□□ -2.17
PEP8YJL053W ILM1P47155 203 aa1.49□□□□□ -2.17
PEP8YJL053W YGL034CP53186 121 aa1.49□□□□□ -2.17
PEP8YJL053W PET117Q02771 107 aa1.49□□□□□ -2.17
PEP8YJL053W RSM10Q03201 203 aa1.49□□□□□ -2.17
PEP8YJL053W PRM15Q03262 622 aa1.49□□□□□ -2.17
PEP8YJL053W YOR186WQ08560 144 aa1.49□□□□□ -2.17
PEP8YJL053W YPL257WQ08974 193 aa1.49□□□□□ -2.17
PEP8YJL053W ATG31Q12421 196 aa1.49□□□□□ -2.17
PEP8YJL053W MYO2P19524 1574 aaKnown RBP1.49□□□□□ -2.17
PEP8YJL053W YOR093CQ12275 1648 aa1.48□□□□□ -2.17
PEP8YJL053W IPP1P00817 287 aaKnown RBP1.48□□□□□ -2.17
PEP8YJL053W MRPL25P23369 157 aa1.48□□□□□ -2.17
PEP8YJL053W MSN4P33749 630 aa1.48□□□□□ -2.17
PEP8YJL053W YOR062CP36025 268 aa1.48□□□□□ -2.17
PEP8YJL053W YBR096WP38256 230 aa1.48□□□□□ -2.17
PEP8YJL053W CUE1P38428 203 aa1.48□□□□□ -2.17
PEP8YJL053W GRE3P38715 327 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
PEP8YJL053W YHR125WP38831 101 aa1.48□□□□□ -2.17
PEP8YJL053W HOC1P47124 396 aa1.48□□□□□ -2.17
PEP8YJL053W JHD2P47156 728 aaPredicted RBP1.48□□□□□ -2.17
PEP8YJL053W YGL159WP53110 370 aa1.48□□□□□ -2.17
PEP8YJL053W INM2Q05533 292 aa1.48□□□□□ -2.17
PEP8YJL053W AKR2Q12013 749 aa1.48□□□□□ -2.17
PEP8YJL053W SPT6P23615 1451 aaKnown RBP1.48□□□□□ -2.17
PEP8YJL053W LTE1P07866 1435 aa1.48□□□□□ -2.17
PEP8YJL053W FKS1P38631 1876 aaKnown RBP1.48□□□□□ -2.17
PEP8YJL053W TY1B-DR4Q07793 1604 aa1.48□□□□□ -2.17
PEP8YJL053W Q0255P03881 472 aa1.47□□□□□ -2.17
PEP8YJL053W TCP1P12612 559 aaKnown RBP1.47□□□□□ -2.17
PEP8YJL053W YCR016WP25617 290 aaKnown RBP1.47□□□□□ -2.17
PEP8YJL053W EHD3P28817 500 aa1.47□□□□□ -2.17
PEP8YJL053W MSA2P36157 363 aa1.47□□□□□ -2.17
PEP8YJL053W NRG2P38082 220 aa1.47□□□□□ -2.17
PEP8YJL053W FIS1P40515 155 aa1.47□□□□□ -2.17
PEP8YJL053W NUP84P52891 726 aa1.47□□□□□ -2.17
PEP8YJL053W GTR2P53290 341 aa1.47□□□□□ -2.17
PEP8YJL053W DAD3P69850 94 aa1.47□□□□□ -2.17
PEP8YJL053W SEI1Q06058 285 aa1.47□□□□□ -2.17
PEP8YJL053W YPR172WQ06608 200 aa1.47□□□□□ -2.17
PEP8YJL053W YLR030WQ07967 263 aa1.47□□□□□ -2.17
PEP8YJL053W HTL1Q9URQ5 78 aa1.47□□□□□ -2.17
PEP8YJL053W RPL9AP05738 191 aaKnown RBP1.46□□□□□ -2.18
PEP8YJL053W YHR032W-AP0C5N6 59 aa1.46□□□□□ -2.18
PEP8YJL053W DSF1P0CX08 502 aa1.46□□□□□ -2.18
PEP8YJL053W YNR073CP0CX09 502 aa1.46□□□□□ -2.18
PEP8YJL053W YCR102CP25608 368 aa1.46□□□□□ -2.18
PEP8YJL053W VMA11P32842 164 aa1.46□□□□□ -2.18
PEP8YJL053W YAR068WP39564 161 aa1.46□□□□□ -2.18
PEP8YJL053W YJR056CP47115 236 aa1.46□□□□□ -2.18
PEP8YJL053W DAN1P47178 298 aa1.46□□□□□ -2.18
PEP8YJL053W RPL9BP51401 191 aaKnown RBP1.46□□□□□ -2.18
PEP8YJL053W YNL046WP53956 172 aa1.46□□□□□ -2.18
PEP8YJL053W YML108WQ03759 105 aa1.46□□□□□ -2.18
PEP8YJL053W YLR283WQ05867 314 aa1.46□□□□□ -2.18
PEP8YJL053W SSQ1Q05931 657 aaPredicted RBP1.46□□□□□ -2.18
PEP8YJL053W YLR126CQ12288 251 aa1.46□□□□□ -2.18
PEP8YJL053W YOR020W-AQ3E824 90 aa1.46□□□□□ -2.18
PEP8YJL053W BUD4P47136 1447 aa1.46□□□□□ -2.18
PEP8YJL053W ECM5Q03214 1411 aa1.46□□□□□ -2.18
PEP8YJL053W HIR3P47171 1648 aa1.45□□□□□ -2.18
PEP8YJL053W COX5AP00424 153 aa1.45□□□□□ -2.18
PEP8YJL053W CUP1-1P0CX80 61 aa1.45□□□□□ -2.18
PEP8YJL053W CUP1-2P0CX81 61 aa1.45□□□□□ -2.18
PEP8YJL053W ERD2P18414 219 aa1.45□□□□□ -2.18
PEP8YJL053W YPT52P36018 234 aaKnown RBP1.45□□□□□ -2.18
PEP8YJL053W YKL075CP36083 450 aa1.45□□□□□ -2.18
PEP8YJL053W LDB7P38210 180 aa1.45□□□□□ -2.18
PEP8YJL053W COX15P40086 486 aa1.45□□□□□ -2.18
PEP8YJL053W CFT1Q06632 1357 aaKnown RBP1.45□□□□□ -2.18
PEP8YJL053W CDC25P04821 1589 aa1.44□□□□□ -2.18
PEP8YJL053W SNA3P14359 133 aa1.44□□□□□ -2.18
PEP8YJL053W DOA4P32571 926 aa1.44□□□□□ -2.18
PEP8YJL053W RSM25P40496 264 aa1.44□□□□□ -2.18
PEP8YJL053W YJL027CP47063 138 aaPredicted RBP1.44□□□□□ -2.18
PEP8YJL053W MCM22P47167 239 aa1.44□□□□□ -2.18
PEP8YJL053W NSA1P53136 463 aaPredicted RBP1.44□□□□□ -2.18
PEP8YJL053W ABF2Q02486 183 aa1.44□□□□□ -2.18
PEP8YJL053W ATG39Q06159 398 aa1.44□□□□□ -2.18
PEP8YJL053W RPA190P10964 1664 aaKnown RBP1.44□□□□□ -2.18
PEP8YJL053W SIR4P11978 1358 aa1.44□□□□□ -2.18
PEP8YJL053W RPO31P04051 1460 aa1.43□□□□□ -2.18
PEP8YJL053W THO2P53552 1597 aaKnown RBP1.43□□□□□ -2.18
PEP8YJL053W MSW1P04803 379 aa1.43□□□□□ -2.18
PEP8YJL053W FBA1P14540 359 aaKnown RBP1.43□□□□□ -2.18
PEP8YJL053W PEX4P29340 183 aa1.43□□□□□ -2.18
PEP8YJL053W MDH3P32419 343 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
PEP8YJL053W RIB1P38066 345 aa1.43□□□□□ -2.18
PEP8YJL053W DOG1P38774 246 aa1.43□□□□□ -2.18
PEP8YJL053W PRE6P40303 254 aaKnown RBP1.43□□□□□ -2.18
PEP8YJL053W CAT5P41735 233 aa1.43□□□□□ -2.18
PEP8YJL053W CIS3P47001 227 aa1.43□□□□□ -2.18
PEP8YJL053W YMD8Q03697 442 aa1.43□□□□□ -2.18
PEP8YJL053W YML096WQ04489 525 aa1.43□□□□□ -2.18
PEP8YJL053W ATO3Q12359 275 aa1.43□□□□□ -2.18
PEP8YJL053W YHR086W-AQ3E746 53 aa1.43□□□□□ -2.18
PEP8YJL053W BOL1Q3E793 110 aa1.43□□□□□ -2.18
PEP8YJL053W DRS2P39524 1355 aa1.43□□□□□ -2.18
PEP8YJL053W BCY1P07278 416 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W FCY2P17064 533 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms