RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	LAC1	P28496	418 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	EDS1	P38073	919 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	WSS1	P38838	269 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	BAT1	P38891	393 aa	Known RBP	4.23	□□□□□ -1.73
PAN1	YIR006C	LRO1	P40345	661 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	HHO1	P53551	258 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	ARL3	Q02804	198 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	YML079W	Q03629	201 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	YOL107W	Q12239	342 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	RPS14A	P06367	137 aa	Known RBP	4.23	□□□□□ -1.73
PAN1	YIR006C	RIP1	P08067	215 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	DPM1	P14020	267 aa	Known RBP	4.23	□□□□□ -1.73
PAN1	YIR006C	RPL3	P14126	387 aa	Known RBP	4.23	□□□□□ -1.73
PAN1	YIR006C	AME1	P38313	324 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	RPS14B	P39516	138 aa	Known RBP	4.23	□□□□□ -1.73
PAN1	YIR006C	MIC26	P50087	233 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	SCW11	P53189	542 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	YDR102C	Q03864	110 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	GIM5	Q04493	163 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	MDM30	Q05930	598 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	BSC6	Q08280	497 aa		4.23	□□□□□ -1.73
PAN1	YIR006C	RPD3	P32561	433 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	TCM62	P38228	572 aa	Known RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	YPC1	P38298	316 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	TRS20	P38334	175 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	STS1	P38637	319 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	SNO3	P43544	222 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MSY1	P48527	492 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MRPL22	P53881	309 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	FMP41	P53889	259 aa	Known RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	SNP1	Q00916	300 aa	Predicted RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	YDR286C	Q05530	114 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	LIP2	Q06005	328 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	YPL257W	Q08974	193 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	YPR096C	O13587	100 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	BAR1	P12630	587 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	RAD23	P32628	398 aa	Known RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	GGC1	P38988	300 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	OST1	P41543	476 aa	Known RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	TAF4	P50105	388 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PAN1	YIR006C	PET191	Q02772	108 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	YLR456W	Q06199	204 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	COA6	Q3E846	104 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	HAP3	P13434	144 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	SEC62	P21825	274 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	CNB1	P25296	175 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	IMG1	P25626	169 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	VRP1	P37370	817 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	YHR138C	P38841	114 aa	Predicted RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	CUP9	P41817	306 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MRX5	P47007	382 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	TTI2	P47168	421 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MTL1	P53214	551 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	COQ10	Q08058	207 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	SWT1	Q12104	458 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MRPL44	P19956	98 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	MTC7	P32633	139 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	QDR3	P38227	689 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	PMT6	P42934	759 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	HHT1	P61830	136 aa		4.22	□□□□□ -1.73
PAN1	YIR006C	PKR1	Q03880	122 aa	Known RBP	4.22	□□□□□ -1.73
PAN1	YIR006C	CDC28	P00546	298 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	AI1	P03875	834 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	SED4	P25365	1065 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	SDS24	P38314	527 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YHR210C	P38893	341 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YPR015C	Q12531	247 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YPL119C-A	Q3E751	87 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	RPS16A	P0CX51	143 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	RPS16B	P0CX52	143 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	PPH21	P23594	369 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	LSB5	P25369	354 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YCL002C	P25565	263 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YCR102C	P25608	368 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	TIM17	P39515	158 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	MGA1	P53050	456 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	KEI1	Q06346	221 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YOR186W	Q08560	144 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	RDL2	Q08742	149 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	PRS5	Q12265	496 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	ATP14	Q12349	124 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	ORT1	Q12375	292 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	YKL018C-A	Q3E7A7	99 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	SCEI	P03882	235 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	COX9	P07255	59 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	FAA1	P30624	700 aa	Known RBP	4.21	□□□□□ -1.74
PAN1	YIR006C	SRX1	P36077	127 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	MRPL15	P36523	253 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	PAC2	P39937	518 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	TPC1	P53257	314 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	PDR17	P53844	350 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	GTO3	Q04806	366 aa		4.21	□□□□□ -1.74
PAN1	YIR006C	RNA15	P25299	296 aa	Predicted RBP	4.2	□□□□□ -1.74
PAN1	YIR006C	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
PAN1	YIR006C	ISR1	Q06098	443 aa	Known RBP	4.2	□□□□□ -1.74
PAN1	YIR006C	POL2	P21951	2222 aa	Known RBP	4.2	□□□□□ -1.74
PAN1	YIR006C	HSP12	P22943	109 aa	Known RBP	4.2	□□□□□ -1.74
PAN1	YIR006C	MNS1	P32906	549 aa		4.2	□□□□□ -1.74
PAN1	YIR006C	ECM15	P35195	104 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms