RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	PEX10	Q05568	337 aa		1.01	□□□□□ -2.25
URM1	YIL008W	YBT1	P32386	1661 aa		1	□□□□□ -2.25
URM1	YIL008W	IML1	P47170	1584 aa		1	□□□□□ -2.25
URM1	YIL008W	RCN1	P36054	211 aa		1	□□□□□ -2.25
URM1	YIL008W	FMP33	P46998	180 aa		1	□□□□□ -2.25
URM1	YIL008W	ARP5	P53946	755 aa		1	□□□□□ -2.25
URM1	YIL008W	CTR3	Q06686	241 aa		1	□□□□□ -2.25
URM1	YIL008W	SME1	Q12330	94 aa	Predicted RBP	1	□□□□□ -2.25
URM1	YIL008W	NUP188	P52593	1655 aa	Known RBP	1	□□□□□ -2.25
URM1	YIL008W	PDR5	P33302	1511 aa	Known RBP	0.99	□□□□□ -2.25
URM1	YIL008W	CFT1	Q06632	1357 aa	Known RBP	0.99	□□□□□ -2.25
URM1	YIL008W	MRPL40	P36534	297 aa		0.99	□□□□□ -2.25
URM1	YIL008W	COS8	P38723	381 aa		0.99	□□□□□ -2.25
URM1	YIL008W	RCY1	P39531	840 aa		0.99	□□□□□ -2.25
URM1	YIL008W	PEP8	P40335	379 aa		0.99	□□□□□ -2.25
URM1	YIL008W	YPR011C	Q12251	326 aa		0.99	□□□□□ -2.25
URM1	YIL008W	EMP46	Q12396	444 aa		0.99	□□□□□ -2.25
URM1	YIL008W	FMP16	Q12497	93 aa		0.99	□□□□□ -2.25
URM1	YIL008W	YIL002W-A	Q3E7Z5	69 aa		0.99	□□□□□ -2.25
URM1	YIL008W	YBL008W-A	Q3E821	79 aa		0.99	□□□□□ -2.25
URM1	YIL008W	SRB8	P25648	1427 aa		0.98	□□□□□ -2.25
URM1	YIL008W	YPR117W	Q06116	2489 aa		0.98	□□□□□ -2.25
URM1	YIL008W	VPS13	Q07878	3144 aa		0.98	□□□□□ -2.25
URM1	YIL008W	RAS2	P01120	322 aa	Known RBP	0.98	□□□□□ -2.25
URM1	YIL008W	CDC7	P06243	507 aa		0.98	□□□□□ -2.25
URM1	YIL008W	FBA1	P14540	359 aa	Known RBP	0.98	□□□□□ -2.25
URM1	YIL008W	YKL070W	P36087	169 aa		0.98	□□□□□ -2.25
URM1	YIL008W	PRS4	P38063	326 aa	Predicted RBP	0.98	□□□□□ -2.25
URM1	YIL008W	EAF6	P47128	113 aa		0.98	□□□□□ -2.25
URM1	YIL008W	SPP2	Q02521	185 aa		0.98	□□□□□ -2.25
URM1	YIL008W	YLR413W	Q06689	675 aa		0.98	□□□□□ -2.25
URM1	YIL008W	TAO3	P40468	2376 aa		0.98	□□□□□ -2.25
URM1	YIL008W	RAD9	P14737	1309 aa		0.97	□□□□□ -2.25
URM1	YIL008W	Q0255	P03881	472 aa		0.97	□□□□□ -2.25
URM1	YIL008W	MET16	P18408	261 aa	Predicted RBP	0.97	□□□□□ -2.25
URM1	YIL008W	DBP3	P20447	523 aa	Known RBP	0.97	□□□□□ -2.25
URM1	YIL008W	SCL1	P21243	252 aa	Known RBP	0.97	□□□□□ -2.25
URM1	YIL008W	PEX4	P29340	183 aa		0.97	□□□□□ -2.25
URM1	YIL008W	SSH1	P38353	490 aa	Known RBP	0.97	□□□□□ -2.25
URM1	YIL008W	DOG1	P38774	246 aa		0.97	□□□□□ -2.25
URM1	YIL008W	ARC15	P40518	154 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
URM1	YIL008W	SMD3	P43321	101 aa	Known RBP	0.97	□□□□□ -2.25
URM1	YIL008W	MAL13	P53338	473 aa		0.97	□□□□□ -2.25
URM1	YIL008W	MRPL23	Q12487	163 aa	Predicted RBP	0.97	□□□□□ -2.25
URM1	YIL008W	TOR1	P35169	2470 aa		0.97	□□□□□ -2.25
URM1	YIL008W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.97	□□□□□ -2.25
URM1	YIL008W	RSF2	P46974	1380 aa		0.96	□□□□□ -2.26
URM1	YIL008W	ROM2	P51862	1356 aa	Known RBP	0.96	□□□□□ -2.26
URM1	YIL008W	YHR032W-A	P0C5N6	59 aa		0.96	□□□□□ -2.26
URM1	YIL008W	SEC22	P22214	214 aa		0.96	□□□□□ -2.26
URM1	YIL008W	YER135C	P40082	130 aa		0.96	□□□□□ -2.26
URM1	YIL008W	DSN1	P40568	576 aa		0.96	□□□□□ -2.26
URM1	YIL008W	YJR012C	P47087	207 aa		0.96	□□□□□ -2.26
URM1	YIL008W	YGR026W	P53217	278 aa		0.96	□□□□□ -2.26
URM1	YIL008W	CTF19	Q02732	369 aa		0.96	□□□□□ -2.26
URM1	YIL008W	GMC2	Q06201	188 aa		0.96	□□□□□ -2.26
URM1	YIL008W	BBP1	Q12365	385 aa		0.96	□□□□□ -2.26
URM1	YIL008W	NUM1	Q00402	2748 aa		0.95	□□□□□ -2.26
URM1	YIL008W	HIS1	P00498	297 aa	Known RBP	0.95	□□□□□ -2.26
URM1	YIL008W	YOL162W	P0CF19	215 aa		0.95	□□□□□ -2.26
URM1	YIL008W	YHR125W	P38831	101 aa		0.95	□□□□□ -2.26
URM1	YIL008W	PEX18	P38855	283 aa		0.95	□□□□□ -2.26
URM1	YIL008W	DDI1	P40087	428 aa		0.95	□□□□□ -2.26
URM1	YIL008W	YER189W	P40104	122 aa		0.95	□□□□□ -2.26
URM1	YIL008W	COA1	P40452	197 aa		0.95	□□□□□ -2.26
URM1	YIL008W	YGL034C	P53186	121 aa		0.95	□□□□□ -2.26
URM1	YIL008W	EGD1	Q02642	157 aa	Known RBP	0.95	□□□□□ -2.26
URM1	YIL008W	YMR279C	Q03263	540 aa		0.95	□□□□□ -2.26
URM1	YIL008W	MRPS8	Q03799	155 aa		0.95	□□□□□ -2.26
URM1	YIL008W	ATO3	Q12359	275 aa		0.95	□□□□□ -2.26
URM1	YIL008W	YPL119C-A	Q3E751	87 aa		0.95	□□□□□ -2.26
URM1	YIL008W	TOR2	P32600	2474 aa	Known RBP	0.95	□□□□□ -2.26
URM1	YIL008W	RRP5	Q05022	1729 aa	Known RBP	0.95	□□□□□ -2.26
URM1	YIL008W	GCN2	P15442	1659 aa		0.94	□□□□□ -2.26
URM1	YIL008W	YRF1-2	P40105	1681 aa		0.94	□□□□□ -2.26
URM1	YIL008W	YLR462W	O13556	202 aa		0.94	□□□□□ -2.26
URM1	YIL008W	SSA3	P09435	649 aa	Known RBP	0.94	□□□□□ -2.26
URM1	YIL008W	DSF1	P0CX08	502 aa		0.94	□□□□□ -2.26
URM1	YIL008W	YNR073C	P0CX09	502 aa		0.94	□□□□□ -2.26
URM1	YIL008W	DAL80	P26343	269 aa		0.94	□□□□□ -2.26
URM1	YIL008W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
URM1	YIL008W	YEL075C	P39972	122 aa		0.94	□□□□□ -2.26
URM1	YIL008W	BMT5	P40493	336 aa		0.94	□□□□□ -2.26
URM1	YIL008W	CIS3	P47001	227 aa		0.94	□□□□□ -2.26
URM1	YIL008W	ERG25	P53045	309 aa		0.94	□□□□□ -2.26
URM1	YIL008W	KAP114	P53067	1004 aa		0.94	□□□□□ -2.26
URM1	YIL008W	YDR124W	Q04608	324 aa		0.94	□□□□□ -2.26
URM1	YIL008W	YLR179C	Q06252	201 aa	Known RBP	0.94	□□□□□ -2.26
URM1	YIL008W	AKR2	Q12013	749 aa		0.94	□□□□□ -2.26
URM1	YIL008W	DCN1	Q12395	269 aa		0.94	□□□□□ -2.26
URM1	YIL008W	SNF8	Q12483	233 aa		0.94	□□□□□ -2.26
URM1	YIL008W	URB1	P34241	1764 aa	Known RBP	0.93	□□□□□ -2.26
URM1	YIL008W	COX5A	P00424	153 aa		0.93	□□□□□ -2.26
URM1	YIL008W	RPS24A	P0CX31	135 aa	Known RBP	0.93	□□□□□ -2.26
URM1	YIL008W	RPS24B	P0CX32	135 aa	Known RBP	0.93	□□□□□ -2.26
URM1	YIL008W	MDH2	P22133	377 aa		0.93	□□□□□ -2.26
URM1	YIL008W	VPS3	P23643	1011 aa		0.93	□□□□□ -2.26
URM1	YIL008W	QRI5	P32344	111 aa		0.93	□□□□□ -2.26
URM1	YIL008W	YHR022C	P38763	256 aa		0.93	□□□□□ -2.26
URM1	YIL008W	CTR2	P38865	189 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 134.3 ms