RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W TFC7Q12415 435 aa4.41□□□□□ -1.7
MSH1YHR120W SPS100P13130 326 aa4.41□□□□□ -1.7
MSH1YHR120W CDC34P14682 295 aa4.41□□□□□ -1.7
MSH1YHR120W MRP20P32387 263 aa4.41□□□□□ -1.7
MSH1YHR120W MDH3P32419 343 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
MSH1YHR120W PAD1P33751 242 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
MSH1YHR120W AGX1P43567 385 aa4.41□□□□□ -1.7
MSH1YHR120W MRX5P47007 382 aa4.41□□□□□ -1.7
MSH1YHR120W ADO1P47143 340 aaKnown RBP4.41□□□□□ -1.7
MSH1YHR120W YLR152CP54072 576 aa4.41□□□□□ -1.7
MSH1YHR120W APM1Q00776 475 aaPredicted RBP4.41□□□□□ -1.7
MSH1YHR120W TGS1Q12052 315 aa4.41□□□□□ -1.7
MSH1YHR120W FUR4P05316 633 aaKnown RBP4.4□□□□□ -1.7
MSH1YHR120W YGP1P38616 354 aaKnown RBP4.4□□□□□ -1.7
MSH1YHR120W YHL037CP38733 133 aa4.4□□□□□ -1.7
MSH1YHR120W SOL3P38858 249 aa4.4□□□□□ -1.7
MSH1YHR120W BFR1P38934 470 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
MSH1YHR120W GPP1P41277 250 aaKnown RBP4.4□□□□□ -1.7
MSH1YHR120W YFL051CP43552 160 aa4.4□□□□□ -1.7
MSH1YHR120W MRPL19P53875 158 aa4.4□□□□□ -1.7
MSH1YHR120W YOR378WQ08902 515 aa4.4□□□□□ -1.7
MSH1YHR120W HMS1Q12398 434 aa4.4□□□□□ -1.7
MSH1YHR120W EAF3Q12432 401 aa4.4□□□□□ -1.7
MSH1YHR120W TY1A-DR3Q12441 440 aa4.4□□□□□ -1.7
MSH1YHR120W MKS1P34072 584 aa4.4□□□□□ -1.71
MSH1YHR120W MTR2P34232 184 aaKnown RBP4.4□□□□□ -1.71
MSH1YHR120W SDH8P38345 138 aa4.4□□□□□ -1.71
MSH1YHR120W IDP2P41939 412 aa4.4□□□□□ -1.71
MSH1YHR120W SNN1P48232 102 aa4.4□□□□□ -1.71
MSH1YHR120W BUL1P48524 976 aa4.4□□□□□ -1.71
MSH1YHR120W YGR042WP53227 271 aa4.4□□□□□ -1.71
MSH1YHR120W PCP1P53259 346 aa4.4□□□□□ -1.71
MSH1YHR120W FMP41P53889 259 aaKnown RBP4.4□□□□□ -1.71
MSH1YHR120W CTF19Q02732 369 aa4.4□□□□□ -1.71
MSH1YHR120W MRP51Q02950 344 aa4.4□□□□□ -1.71
MSH1YHR120W EST3Q03096 181 aa4.4□□□□□ -1.71
MSH1YHR120W RBS1Q05672 457 aaKnown RBP4.4□□□□□ -1.71
MSH1YHR120W MRL1Q06815 381 aa4.4□□□□□ -1.71
MSH1YHR120W YHR214C-EQ8TGK0 99 aa4.4□□□□□ -1.71
MSH1YHR120W ZRC1P20107 442 aa4.39□□□□□ -1.71
MSH1YHR120W GAS1P22146 559 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W DBF20P32328 564 aa4.39□□□□□ -1.71
MSH1YHR120W PPZ2P33329 710 aa4.39□□□□□ -1.71
MSH1YHR120W PGD1P40356 397 aa4.39□□□□□ -1.71
MSH1YHR120W CAF16P43569 289 aa4.39□□□□□ -1.71
MSH1YHR120W Q0142Q9ZZW4 58 aa4.39□□□□□ -1.71
MSH1YHR120W URA6P15700 204 aa4.39□□□□□ -1.71
MSH1YHR120W HNM1P19807 563 aa4.39□□□□□ -1.71
MSH1YHR120W PET18P25362 215 aa4.39□□□□□ -1.71
MSH1YHR120W PPA2P28239 310 aa4.39□□□□□ -1.71
MSH1YHR120W PUG1P40100 303 aa4.39□□□□□ -1.71
MSH1YHR120W BUD8P41698 603 aa4.39□□□□□ -1.71
MSH1YHR120W CIN2P46670 268 aa4.39□□□□□ -1.71
MSH1YHR120W ACS2P52910 683 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W ARG5,6Q01217 863 aa4.39□□□□□ -1.71
MSH1YHR120W AGE1Q04412 482 aa4.39□□□□□ -1.71
MSH1YHR120W HEM25Q07534 307 aa4.39□□□□□ -1.71
MSH1YHR120W LSO2Q3E772 92 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W PCC1Q3E833 88 aa4.39□□□□□ -1.71
MSH1YHR120W PET20Q99373 253 aa4.39□□□□□ -1.71
MSH1YHR120W ARO3P14843 370 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W YCL042WP25572 119 aa4.39□□□□□ -1.71
MSH1YHR120W SPT10P35208 640 aa4.39□□□□□ -1.71
MSH1YHR120W GTT1P40582 234 aa4.39□□□□□ -1.71
MSH1YHR120W YJR111CP47148 283 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W PNC1P53184 216 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W OKP1P53298 406 aa4.39□□□□□ -1.71
MSH1YHR120W ELA1P53861 379 aaPredicted RBP4.39□□□□□ -1.71
MSH1YHR120W YDR102CQ03864 110 aa4.39□□□□□ -1.71
MSH1YHR120W MRX8Q05473 314 aa4.39□□□□□ -1.71
MSH1YHR120W ZEO1Q08245 113 aa4.39□□□□□ -1.71
MSH1YHR120W TFB5Q3E7C1 72 aaPredicted RBP4.39□□□□□ -1.71
MSH1YHR120W ODC2Q99297 307 aa4.39□□□□□ -1.71
MSH1YHR120W SEC16P48415 2195 aaKnown RBP4.39□□□□□ -1.71
MSH1YHR120W BLM10P43583 2143 aa4.39□□□□□ -1.71
MSH1YHR120W RPS31P05759 152 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W UBI4P0CG63 381 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W APA2P22108 325 aa4.38□□□□□ -1.71
MSH1YHR120W SHG1P38337 142 aa4.38□□□□□ -1.71
MSH1YHR120W APJ1P53940 528 aa4.38□□□□□ -1.71
MSH1YHR120W ACT1P60010 375 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W CTS2Q06350 511 aa4.38□□□□□ -1.71
MSH1YHR120W NCE102Q12207 173 aaRIP-Chip data4.38□□□□□ -1.71not detected
MSH1YHR120W OPI3P05375 206 aa4.38□□□□□ -1.71
MSH1YHR120W IFM1P25038 676 aa4.38□□□□□ -1.71
MSH1YHR120W SNC2P33328 115 aa4.38□□□□□ -1.71
MSH1YHR120W RPL13BP40212 199 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W MCM22P47167 239 aa4.38□□□□□ -1.71
MSH1YHR120W BUD25P85052 153 aa4.38□□□□□ -1.71
MSH1YHR120W HAS1Q03532 505 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W YAP6Q03935 383 aa4.38□□□□□ -1.71
MSH1YHR120W BER1Q06688 274 aaKnown RBP4.38□□□□□ -1.71
MSH1YHR120W MIM1Q08176 113 aa4.38□□□□□ -1.71
MSH1YHR120W RPL13AQ12690 199 aaPredicted RBP4.38□□□□□ -1.71
MSH1YHR120W SPO7P18410 259 aa4.37□□□□□ -1.71
MSH1YHR120W SRP102P36057 244 aaPredicted RBP4.37□□□□□ -1.71
MSH1YHR120W PRS3P38689 320 aaKnown RBP4.37□□□□□ -1.71
MSH1YHR120W YIP4P53093 235 aa4.37□□□□□ -1.71
MSH1YHR120W RMD9P53140 646 aaKnown RBP4.37□□□□□ -1.71
MSH1YHR120W YCL001W-AP87012 153 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms