RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W FET4P40988 552 aa2.96□□□□□ -1.94
USE1YGL098W SPG5P42933 373 aa2.96□□□□□ -1.94
USE1YGL098W YGR149WP48236 432 aa2.96□□□□□ -1.94
USE1YGL098W BOR1P53838 576 aa2.96□□□□□ -1.94
USE1YGL098W YNL018CP53976 612 aa2.96□□□□□ -1.94
USE1YGL098W DIA1P54005 336 aa2.96□□□□□ -1.94
USE1YGL098W HHT1P61830 136 aa2.96□□□□□ -1.94
USE1YGL098W CDC14Q00684 551 aa2.96□□□□□ -1.94
USE1YGL098W YPL080CQ02826 108 aa2.96□□□□□ -1.94
USE1YGL098W MRX8Q05473 314 aa2.96□□□□□ -1.94
USE1YGL098W BNA5Q05979 453 aa2.96□□□□□ -1.94
USE1YGL098W AAD4Q07747 329 aa2.96□□□□□ -1.94
USE1YGL098W YLR030WQ07967 263 aa2.96□□□□□ -1.94
USE1YGL098W PLB3Q08108 686 aa2.96□□□□□ -1.94
USE1YGL098W IES4Q08561 116 aa2.96□□□□□ -1.94
USE1YGL098W YOR385WQ08909 290 aa2.96□□□□□ -1.94
USE1YGL098W ERV2Q12284 196 aa2.96□□□□□ -1.94
USE1YGL098W SWM1Q12379 170 aa2.96□□□□□ -1.94
USE1YGL098W PAR32Q12515 295 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W YLR146W-AQ2V2P1 62 aa2.96□□□□□ -1.94
USE1YGL098W YKL033W-AQ86ZR7 236 aa2.96□□□□□ -1.94
USE1YGL098W RIM15P43565 1770 aa2.95□□□□□ -1.94
USE1YGL098W TDH2P00358 332 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W TIR1P10863 254 aa2.95□□□□□ -1.94
USE1YGL098W NPR1P22211 790 aa2.95□□□□□ -1.94
USE1YGL098W ELO2P25358 347 aa2.95□□□□□ -1.94
USE1YGL098W PUT3P25502 979 aaPredicted RBP2.95□□□□□ -1.94
USE1YGL098W ERG3P32353 365 aa2.95□□□□□ -1.94
USE1YGL098W MF(ALPHA)2P32435 120 aa2.95□□□□□ -1.94
USE1YGL098W YKU70P32807 602 aa2.95□□□□□ -1.94
USE1YGL098W YOX1P34161 385 aa2.95□□□□□ -1.94
USE1YGL098W THI80P35202 319 aa2.95□□□□□ -1.94
USE1YGL098W PAN3P36102 679 aaPredicted RBP2.95□□□□□ -1.94
USE1YGL098W YBR292CP38357 123 aa2.95□□□□□ -1.94
USE1YGL098W WSS1P38838 269 aa2.95□□□□□ -1.94
USE1YGL098W FMO1P38866 432 aa2.95□□□□□ -1.94
USE1YGL098W FAA3P39002 694 aa2.95□□□□□ -1.94
USE1YGL098W MET30P39014 640 aa2.95□□□□□ -1.94
USE1YGL098W PEX7P39108 375 aa2.95□□□□□ -1.94
USE1YGL098W SNU13P39990 126 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W HEM14P40012 539 aa2.95□□□□□ -1.94
USE1YGL098W COX15P40086 486 aa2.95□□□□□ -1.94
USE1YGL098W YER188WP40103 239 aa2.95□□□□□ -1.94
USE1YGL098W RPL13BP40212 199 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W PHS1P40857 217 aa2.95□□□□□ -1.94
USE1YGL098W GTS1P40956 396 aa2.95□□□□□ -1.94
USE1YGL098W TES1P41903 349 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W MAF1P41910 395 aa2.95□□□□□ -1.94
USE1YGL098W PFD1P46988 109 aa2.95□□□□□ -1.94
USE1YGL098W BNS1P50084 137 aa2.95□□□□□ -1.94
USE1YGL098W MUP1P50276 574 aa2.95□□□□□ -1.94
USE1YGL098W TYW3P53177 273 aa2.95□□□□□ -1.94
USE1YGL098W MZM1Q03429 123 aaPredicted RBP2.95□□□□□ -1.94
USE1YGL098W YMR166CQ03829 368 aa2.95□□□□□ -1.94
USE1YGL098W THI74Q04083 370 aa2.95□□□□□ -1.94
USE1YGL098W HNT1Q04344 158 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W GTO3Q04806 366 aa2.95□□□□□ -1.94
USE1YGL098W DAL4Q04895 635 aa2.95□□□□□ -1.94
USE1YGL098W LOA1Q06508 300 aa2.95□□□□□ -1.94
USE1YGL098W BSP1Q06604 576 aa2.95□□□□□ -1.94
USE1YGL098W CRT10Q08226 957 aa2.95□□□□□ -1.94
USE1YGL098W TGL5Q12043 749 aa2.95□□□□□ -1.94
USE1YGL098W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
USE1YGL098W RPL7BQ12213 244 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W FRE7Q12333 620 aa2.95□□□□□ -1.94
USE1YGL098W PDH1Q12428 516 aaKnown RBP2.95□□□□□ -1.94
USE1YGL098W IZH2Q12442 317 aa2.95□□□□□ -1.94
USE1YGL098W YIR021W-AQ3E739 70 aa2.95□□□□□ -1.94
USE1YGL098W TPI1P00942 248 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W ATP10P18496 279 aa2.94□□□□□ -1.94
USE1YGL098W NUP1P20676 1076 aa2.94□□□□□ -1.94
USE1YGL098W PPA2P28239 310 aa2.94□□□□□ -1.94
USE1YGL098W OCH1P31755 480 aa2.94□□□□□ -1.94
USE1YGL098W GLC7P32598 312 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W EMP70P32802 667 aa2.94□□□□□ -1.94
USE1YGL098W YKL187CP34231 750 aa2.94□□□□□ -1.94
USE1YGL098W GEX2P36173 615 aa2.94□□□□□ -1.94
USE1YGL098W REG2P38232 338 aa2.94□□□□□ -1.94
USE1YGL098W SEC72P39742 193 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W YER158CP40095 573 aa2.94□□□□□ -1.94
USE1YGL098W YIL161WP40449 235 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W SDP1P40479 209 aa2.94□□□□□ -1.94
USE1YGL098W RPS10BP46784 105 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W IKS1P47042 667 aa2.94□□□□□ -1.94
USE1YGL098W PET130P47065 347 aa2.94□□□□□ -1.94
USE1YGL098W GPI14P47088 403 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W NIF3P53081 288 aa2.94□□□□□ -1.94
USE1YGL098W VHT1P53241 593 aa2.94□□□□□ -1.94
USE1YGL098W YGR079WP53249 370 aa2.94□□□□□ -1.94
USE1YGL098W NCE103P53615 221 aa2.94□□□□□ -1.94
USE1YGL098W PDR17P53844 350 aa2.94□□□□□ -1.94
USE1YGL098W YNL260CP53846 198 aa2.94□□□□□ -1.94
USE1YGL098W PDR16P53860 351 aaKnown RBP2.94□□□□□ -1.94
USE1YGL098W SMX3P54999 86 aaPredicted RBP2.94□□□□□ -1.94
USE1YGL098W MET31Q03081 177 aa2.94□□□□□ -1.94
USE1YGL098W EST3Q03096 181 aa2.94□□□□□ -1.94
USE1YGL098W ADD37Q03233 198 aa2.94□□□□□ -1.94
USE1YGL098W MSC2Q03455 724 aa2.94□□□□□ -1.94
USE1YGL098W SDH7Q04401 133 aa2.94□□□□□ -1.94
USE1YGL098W ROY1Q04847 553 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 140 ms