RNA–Protein interactions for RNA: YER013W

PRP22, Transcript of DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase, yeast

Gene PRP22, Length 3,438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP22	YER013W	CAT5	P41735	233 aa		3.12	□□□□□ -1.91
PRP22	YER013W	BUL1	P48524	976 aa		3.12	□□□□□ -1.91
PRP22	YER013W	BOR1	P53838	576 aa		3.12	□□□□□ -1.91
PRP22	YER013W	VPS9	P54787	451 aa		3.12	□□□□□ -1.91
PRP22	YER013W	BLS1	Q06071	122 aa		3.12	□□□□□ -1.91
PRP22	YER013W	YLR446W	Q06204	433 aa		3.12	□□□□□ -1.91
PRP22	YER013W	YDL157C	Q12082	118 aa		3.12	□□□□□ -1.91
PRP22	YER013W	NBP2	Q12163	236 aa		3.12	□□□□□ -1.91
PRP22	YER013W	SNF8	Q12483	233 aa		3.12	□□□□□ -1.91
PRP22	YER013W	RPL35A	P0CX84	120 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	RPL35B	P0CX85	120 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	TIR1	P10863	254 aa		3.11	□□□□□ -1.91
PRP22	YER013W	NOP1	P15646	327 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	ERG3	P32353	365 aa		3.11	□□□□□ -1.91
PRP22	YER013W	UGX2	P32772	223 aa		3.11	□□□□□ -1.91
PRP22	YER013W	GEX2	P36173	615 aa		3.11	□□□□□ -1.91
PRP22	YER013W	AGP2	P38090	596 aa		3.11	□□□□□ -1.91
PRP22	YER013W	LRP1	P38801	184 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	SUR2	P38992	349 aa		3.11	□□□□□ -1.91
PRP22	YER013W	PRM5	P40476	318 aa		3.11	□□□□□ -1.91
PRP22	YER013W	TRM9	P49957	279 aa		3.11	□□□□□ -1.91
PRP22	YER013W	ECM18	Q04623	453 aa		3.11	□□□□□ -1.91
PRP22	YER013W	DIC1	Q06143	298 aa		3.11	□□□□□ -1.91
PRP22	YER013W	BER1	Q06688	274 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	POS5	Q06892	414 aa		3.11	□□□□□ -1.91
PRP22	YER013W	GPI12	P23797	304 aa		3.11	□□□□□ -1.91
PRP22	YER013W	RER1	P25560	188 aa		3.11	□□□□□ -1.91
PRP22	YER013W	YHL044W	P38727	235 aa		3.11	□□□□□ -1.91
PRP22	YER013W	LYS12	P40495	371 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	BUD8	P41698	603 aa		3.11	□□□□□ -1.91
PRP22	YER013W	NIF3	P53081	288 aa		3.11	□□□□□ -1.91
PRP22	YER013W	YIF1	P53845	314 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	TEX1	P53851	422 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	TPS1	Q00764	495 aa	Known RBP	3.11	□□□□□ -1.91
PRP22	YER013W	APM1	Q00776	475 aa	Predicted RBP	3.11	□□□□□ -1.91
PRP22	YER013W	PAU23	Q07987	124 aa		3.11	□□□□□ -1.91
PRP22	YER013W	IRC10	Q08118	586 aa		3.11	□□□□□ -1.91
PRP22	YER013W	DCI1	Q08558	271 aa		3.11	□□□□□ -1.91
PRP22	YER013W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
PRP22	YER013W	YDL177C	Q12257	170 aa		3.11	□□□□□ -1.91
PRP22	YER013W	PAU17	Q12370	124 aa		3.11	□□□□□ -1.91
PRP22	YER013W	LAS17	Q12446	633 aa		3.11	□□□□□ -1.91
PRP22	YER013W	SAL1	D6W196	494 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YER190C-B	P0CX94	160 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YEL077W-A	P0CX95	160 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YGR296C-B	P0CX96	160 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YPL283W-B	P0CX97	160 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YPR204C-A	P0CX98	160 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YCL068C	P25593	260 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YCR090C	P25654	182 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	RIM1	P32445	135 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	POP8	P38208	133 aa		3.1	□□□□□ -1.91
PRP22	YER013W	SAF1	P38352	637 aa		3.1	□□□□□ -1.91
PRP22	YER013W	SDP1	P40479	209 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YJR015W	P47090	510 aa		3.1	□□□□□ -1.91
PRP22	YER013W	TAM41	P53230	385 aa		3.1	□□□□□ -1.91
PRP22	YER013W	TPT1	Q12272	230 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	POP5	P28005	173 aa		3.1	□□□□□ -1.91
PRP22	YER013W	CDC5	P32562	705 aa		3.1	□□□□□ -1.91
PRP22	YER013W	YKL075C	P36083	450 aa		3.1	□□□□□ -1.91
PRP22	YER013W	GPI16	P38875	610 aa		3.1	□□□□□ -1.91
PRP22	YER013W	RMD9	P53140	646 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	SAY1	P53324	424 aa		3.1	□□□□□ -1.91
PRP22	YER013W	TGL5	Q12043	749 aa		3.1	□□□□□ -1.91
PRP22	YER013W	UBX3	Q12229	455 aa		3.1	□□□□□ -1.91
PRP22	YER013W	PRS5	Q12265	496 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	RPL13A	Q12690	199 aa	Predicted RBP	3.1	□□□□□ -1.91
PRP22	YER013W	COX3	P00420	269 aa		3.1	□□□□□ -1.91
PRP22	YER013W	SAG1	P20840	650 aa		3.1	□□□□□ -1.91
PRP22	YER013W	MRS4	P23500	304 aa		3.1	□□□□□ -1.91
PRP22	YER013W	ADH7	P25377	361 aa		3.1	□□□□□ -1.91
PRP22	YER013W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
PRP22	YER013W	WSC4	P38739	605 aa		3.1	□□□□□ -1.91
PRP22	YER013W	PSD1	P39006	500 aa		3.1	□□□□□ -1.91
PRP22	YER013W	LSM5	P40089	93 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	YNL198C	P40166	100 aa		3.1	□□□□□ -1.91
PRP22	YER013W	FIS1	P40515	155 aa		3.1	□□□□□ -1.91
PRP22	YER013W	TIM10	P87108	93 aa		3.1	□□□□□ -1.91
PRP22	YER013W	GOT1	Q03554	138 aa		3.1	□□□□□ -1.91
PRP22	YER013W	GIS1	Q03833	894 aa		3.1	□□□□□ -1.91
PRP22	YER013W	CAB5	Q03941	241 aa		3.1	□□□□□ -1.91
PRP22	YER013W	HRI1	Q05905	244 aa	Known RBP	3.1	□□□□□ -1.91
PRP22	YER013W	ILV1	P00927	576 aa	Known RBP	3.09	□□□□□ -1.91
PRP22	YER013W	TIP1	P27654	210 aa	Predicted RBP	3.09	□□□□□ -1.91
PRP22	YER013W	ATS1	P31386	333 aa		3.09	□□□□□ -1.91
PRP22	YER013W	YKL102C	P34249	101 aa		3.09	□□□□□ -1.91
PRP22	YER013W	MRPL11	P36521	249 aa	Predicted RBP	3.09	□□□□□ -1.91
PRP22	YER013W	PFS2	P42841	465 aa	Known RBP	3.09	□□□□□ -1.91
PRP22	YER013W	SMD3	P43321	101 aa	Known RBP	3.09	□□□□□ -1.91
PRP22	YER013W	ERJ5	P43613	295 aa	Predicted RBP	3.09	□□□□□ -1.91
PRP22	YER013W	STE24	P47154	453 aa		3.09	□□□□□ -1.91
PRP22	YER013W	APJ1	P53940	528 aa		3.09	□□□□□ -1.91
PRP22	YER013W	NRG1	Q03125	231 aa		3.09	□□□□□ -1.91
PRP22	YER013W	RSM10	Q03201	203 aa		3.09	□□□□□ -1.91
PRP22	YER013W	TRI1	Q05024	226 aa		3.09	□□□□□ -1.91
PRP22	YER013W	RRP45	Q05636	305 aa	Known RBP	3.09	□□□□□ -1.91
PRP22	YER013W	NDJ1	Q12366	352 aa		3.09	□□□□□ -1.91
PRP22	YER013W	ISA2	Q12425	185 aa		3.09	□□□□□ -1.91
PRP22	YER013W	RDI1	Q12434	202 aa		3.09	□□□□□ -1.91
PRP22	YER013W	YOR304C-A	O14468	76 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms