RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC3	YER008C	YPT52	P36018	234 aa	Known RBP	1	□□□□□ -2.25
SEC3	YER008C	BAT1	P38891	393 aa	Known RBP	1	□□□□□ -2.25
SEC3	YER008C	SEN34	P39707	275 aa		1	□□□□□ -2.25
SEC3	YER008C	PMT4	P46971	762 aa		1	□□□□□ -2.25
SEC3	YER008C	CPR7	P47103	393 aa		1	□□□□□ -2.25
SEC3	YER008C	SOL1	P50278	321 aa		1	□□□□□ -2.25
SEC3	YER008C	MMS2	P53152	137 aa		1	□□□□□ -2.25
SEC3	YER008C	ZWF1	P11412	505 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	MIR1	P23641	311 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	PRX1	P34227	261 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	RFS1	P38234	210 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	MBA1	P38300	278 aa		0.99	□□□□□ -2.25
SEC3	YER008C	KRE29	P40026	464 aa		0.99	□□□□□ -2.25
SEC3	YER008C	ASG7	P46993	209 aa		0.99	□□□□□ -2.25
SEC3	YER008C	NUP57	P48837	541 aa		0.99	□□□□□ -2.25
SEC3	YER008C	FMP48	P53233	369 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YNR066C	P53752	436 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YLR177W	Q06251	628 aa		0.99	□□□□□ -2.25
SEC3	YER008C	HNT3	Q08702	217 aa		0.99	□□□□□ -2.25
SEC3	YER008C	RRP42	Q12277	265 aa	Predicted RBP	0.99	□□□□□ -2.25
SEC3	YER008C	YAL063C-A	Q3E791	96 aa		0.99	□□□□□ -2.25
SEC3	YER008C	IZH4	Q99393	312 aa		0.99	□□□□□ -2.25
SEC3	YER008C	HEM4	P06174	275 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YKR104W	P0CE69	306 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YCR023C	P25351	611 aa		0.99	□□□□□ -2.25
SEC3	YER008C	TRX3	P25372	127 aa		0.99	□□□□□ -2.25
SEC3	YER008C	ACB1	P31787	87 aa		0.99	□□□□□ -2.25
SEC3	YER008C	COX14	P39103	70 aa		0.99	□□□□□ -2.25
SEC3	YER008C	PTI1	P39927	425 aa	Predicted RBP	0.99	□□□□□ -2.25
SEC3	YER008C	YJL016W	P47072	561 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YJR149W	P47177	404 aa		0.99	□□□□□ -2.25
SEC3	YER008C	GET1	P53192	235 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YDR248C	Q03786	193 aa		0.99	□□□□□ -2.25
SEC3	YER008C	HRI1	Q05905	244 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	GAS2	Q06135	555 aa		0.99	□□□□□ -2.25
SEC3	YER008C	GGA1	Q06336	557 aa		0.99	□□□□□ -2.25
SEC3	YER008C	TFC7	Q12415	435 aa		0.99	□□□□□ -2.25
SEC3	YER008C	MRX4	Q12467	430 aa		0.99	□□□□□ -2.25
SEC3	YER008C	RPS28B	P0C0X0	67 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	RPS18A	P0CX55	146 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	RPS18B	P0CX56	146 aa	Predicted RBP	0.99	□□□□□ -2.25
SEC3	YER008C	CDC13	P32797	924 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	KTI12	P34253	313 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	MIX23	P38162	196 aa		0.99	□□□□□ -2.25
SEC3	YER008C	ARN2	P38724	620 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YFL064C	P43540	174 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YLR446W	Q06204	433 aa		0.99	□□□□□ -2.25
SEC3	YER008C	MRX9	Q07349	420 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	YPR202W	Q08993	238 aa		0.99	□□□□□ -2.25
SEC3	YER008C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.99	□□□□□ -2.25
SEC3	YER008C	RIB3	Q99258	208 aa		0.99	□□□□□ -2.25
SEC3	YER008C	IGO2	Q9P305	131 aa		0.99	□□□□□ -2.25
SEC3	YER008C	UBR1	P19812	1950 aa		0.99	□□□□□ -2.25
SEC3	YER008C	SSO1	P32867	290 aa		0.99	□□□□□ -2.25
SEC3	YER008C	SLM6	P38343	150 aa		0.99	□□□□□ -2.25
SEC3	YER008C	PRM5	P40476	318 aa		0.99	□□□□□ -2.25
SEC3	YER008C	MOB2	P43563	287 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YJR054W	P47114	497 aa		0.99	□□□□□ -2.25
SEC3	YER008C	BIR1	P47134	954 aa		0.99	□□□□□ -2.25
SEC3	YER008C	NSA1	P53136	463 aa	Predicted RBP	0.99	□□□□□ -2.25
SEC3	YER008C	SWC4	P53201	476 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YNL140C	P53910	189 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YPL039W	Q03080	316 aa		0.99	□□□□□ -2.25
SEC3	YER008C	VPS60	Q03390	229 aa		0.99	□□□□□ -2.25
SEC3	YER008C	INP1	Q03694	420 aa		0.99	□□□□□ -2.25
SEC3	YER008C	EMI1	Q04406	187 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YMR226C	Q05016	267 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	ATG17	Q06410	417 aa		0.99	□□□□□ -2.25
SEC3	YER008C	YPR147C	Q06522	304 aa	Known RBP	0.99	□□□□□ -2.25
SEC3	YER008C	YOL019W	Q08157	551 aa		0.99	□□□□□ -2.25
SEC3	YER008C	IES4	Q08561	116 aa		0.99	□□□□□ -2.25
SEC3	YER008C	DCN1	Q12395	269 aa		0.99	□□□□□ -2.25
SEC3	YER008C	BMH1	P29311	267 aa	Known RBP	0.98	□□□□□ -2.25
SEC3	YER008C	FUN26	P31381	517 aa		0.98	□□□□□ -2.25
SEC3	YER008C	MRPL3	P36516	390 aa		0.98	□□□□□ -2.25
SEC3	YER008C	YCR087C-A	P37263	153 aa		0.98	□□□□□ -2.25
SEC3	YER008C	FIG1	P38224	298 aa		0.98	□□□□□ -2.25
SEC3	YER008C	MED8	P38304	223 aa		0.98	□□□□□ -2.25
SEC3	YER008C	TRM5	P38793	499 aa		0.98	□□□□□ -2.25
SEC3	YER008C	PAN6	P40459	309 aa		0.98	□□□□□ -2.25
SEC3	YER008C	STB1	P42845	420 aa		0.98	□□□□□ -2.25
SEC3	YER008C	SBH2	P52871	88 aa		0.98	□□□□□ -2.25
SEC3	YER008C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
SEC3	YER008C	SDC1	Q03323	175 aa		0.98	□□□□□ -2.25
SEC3	YER008C	YDR115W	Q04598	105 aa		0.98	□□□□□ -2.25
SEC3	YER008C	SEI1	Q06058	285 aa		0.98	□□□□□ -2.25
SEC3	YER008C	RSA1	Q08932	381 aa		0.98	□□□□□ -2.25
SEC3	YER008C	SME1	Q12330	94 aa	Predicted RBP	0.98	□□□□□ -2.25
SEC3	YER008C	FOL3	Q12676	427 aa	Predicted RBP	0.98	□□□□□ -2.25
SEC3	YER008C	PIS1	P06197	220 aa	Known RBP	0.98	□□□□□ -2.25
SEC3	YER008C	DSF1	P0CX08	502 aa		0.98	□□□□□ -2.25
SEC3	YER008C	YNR073C	P0CX09	502 aa		0.98	□□□□□ -2.25
SEC3	YER008C	URA6	P15700	204 aa		0.98	□□□□□ -2.25
SEC3	YER008C	DPB2	P24482	689 aa	Predicted RBP	0.98	□□□□□ -2.25
SEC3	YER008C	MSA2	P36157	363 aa		0.98	□□□□□ -2.25
SEC3	YER008C	YHR127W	P38833	243 aa	Known RBP	0.98	□□□□□ -2.25
SEC3	YER008C	NRK1	P53915	240 aa		0.98	□□□□□ -2.25
SEC3	YER008C	TRM44	Q02648	567 aa	Known RBP	0.98	□□□□□ -2.25
SEC3	YER008C	ARO80	Q04052	950 aa		0.98	□□□□□ -2.25
SEC3	YER008C	YOL029C	Q08187	201 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms