RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W YPC1P38298 316 aa2.97□□□□□ -1.93
SIZ1YDR409W CHL4P38907 458 aa2.97□□□□□ -1.93
SIZ1YDR409W LSM4P40070 187 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W GAT2P40209 560 aa2.97□□□□□ -1.93
SIZ1YDR409W YJR111CP47148 283 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W YJR149WP47177 404 aa2.97□□□□□ -1.93
SIZ1YDR409W MNN10P50108 393 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W YIP3P53633 176 aa2.97□□□□□ -1.93
SIZ1YDR409W FRE4P53746 719 aa2.97□□□□□ -1.93
SIZ1YDR409W NRK1P53915 240 aa2.97□□□□□ -1.93
SIZ1YDR409W UTP15Q04305 513 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W YPR011CQ12251 326 aa2.97□□□□□ -1.93
SIZ1YDR409W MRP1P10662 321 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W NAM2P11325 894 aa2.97□□□□□ -1.93
SIZ1YDR409W STE4P18851 423 aa2.97□□□□□ -1.93
SIZ1YDR409W GPI12P23797 304 aa2.97□□□□□ -1.93
SIZ1YDR409W TRX3P25372 127 aa2.97□□□□□ -1.93
SIZ1YDR409W SKN1P33336 771 aa2.97□□□□□ -1.93
SIZ1YDR409W SOR1P35497 357 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W LNP1P38878 278 aa2.97□□□□□ -1.93
SIZ1YDR409W UIP3P39547 235 aa2.97□□□□□ -1.93
SIZ1YDR409W MMF1P40185 145 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W IDP2P41939 412 aa2.97□□□□□ -1.93
SIZ1YDR409W YCH1P42937 148 aa2.97□□□□□ -1.93
SIZ1YDR409W YJL163CP46996 555 aa2.97□□□□□ -1.93
SIZ1YDR409W HST3P53687 447 aa2.97□□□□□ -1.93
SIZ1YDR409W PGA1P53896 198 aa2.97□□□□□ -1.93
SIZ1YDR409W EST3Q03096 181 aa2.97□□□□□ -1.93
SIZ1YDR409W PEX30Q06169 523 aa2.97□□□□□ -1.93
SIZ1YDR409W SOR2Q07786 357 aa2.97□□□□□ -1.93
SIZ1YDR409W LPX1Q12405 387 aaKnown RBP2.97□□□□□ -1.93
SIZ1YDR409W PEX11Q12462 236 aa2.97□□□□□ -1.93
SIZ1YDR409W YLR422WQ06409 1932 aa2.97□□□□□ -1.93
SIZ1YDR409W DPM1P14020 267 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W EPT1P22140 391 aa2.96□□□□□ -1.94
SIZ1YDR409W ADH7P25377 361 aa2.96□□□□□ -1.94
SIZ1YDR409W CDC50P25656 391 aa2.96□□□□□ -1.94
SIZ1YDR409W GAR1P28007 205 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W PRP18P33411 251 aaPredicted RBP2.96□□□□□ -1.94
SIZ1YDR409W SDH4P37298 181 aa2.96□□□□□ -1.94
SIZ1YDR409W HMT1P38074 348 aa2.96□□□□□ -1.94
SIZ1YDR409W FAU1P40099 211 aa2.96□□□□□ -1.94
SIZ1YDR409W ICE2P40499 491 aa2.96□□□□□ -1.94
SIZ1YDR409W YHC3P47040 408 aa2.96□□□□□ -1.94
SIZ1YDR409W VPS25P47142 202 aa2.96□□□□□ -1.94
SIZ1YDR409W BAT2P47176 376 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W DAN1P47178 298 aa2.96□□□□□ -1.94
SIZ1YDR409W NUP57P48837 541 aa2.96□□□□□ -1.94
SIZ1YDR409W SWF1Q04629 336 aa2.96□□□□□ -1.94
SIZ1YDR409W TMA10Q06177 86 aa2.96□□□□□ -1.94
SIZ1YDR409W MMT2Q08970 484 aa2.96□□□□□ -1.94
SIZ1YDR409W TFC7Q12415 435 aa2.96□□□□□ -1.94
SIZ1YDR409W SET6Q12529 373 aa2.96□□□□□ -1.94
SIZ1YDR409W YOR338WQ99326 363 aa2.96□□□□□ -1.94
SIZ1YDR409W RPL25P04456 142 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W CDC7P06243 507 aa2.96□□□□□ -1.94
SIZ1YDR409W PHO2P07269 559 aa2.96□□□□□ -1.94
SIZ1YDR409W YOL162WP0CF19 215 aa2.96□□□□□ -1.94
SIZ1YDR409W POF1P25576 258 aa2.96□□□□□ -1.94
SIZ1YDR409W IMG1P25626 169 aa2.96□□□□□ -1.94
SIZ1YDR409W DEG1P31115 442 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W ERG24P32462 438 aaKnown RBP2.96□□□□□ -1.94
SIZ1YDR409W CBP4P37267 147 aa2.96□□□□□ -1.94
SIZ1YDR409W RTS2P40962 232 aa2.96□□□□□ -1.94
SIZ1YDR409W SAS2P40963 338 aa2.96□□□□□ -1.94
SIZ1YDR409W SOL1P50278 321 aa2.96□□□□□ -1.94
SIZ1YDR409W NIF3P53081 288 aa2.96□□□□□ -1.94
SIZ1YDR409W YGL117WP53133 265 aa2.96□□□□□ -1.94
SIZ1YDR409W PKP2P53170 491 aa2.96□□□□□ -1.94
SIZ1YDR409W OKP1P53298 406 aa2.96□□□□□ -1.94
SIZ1YDR409W YDR387CQ04162 555 aa2.96□□□□□ -1.94
SIZ1YDR409W RXT3Q07458 294 aa2.96□□□□□ -1.94
SIZ1YDR409W RAD28Q12021 506 aa2.96□□□□□ -1.94
SIZ1YDR409W SPC3Q12133 184 aa2.96□□□□□ -1.94
SIZ1YDR409W RPB3P16370 318 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W ATP10P18496 279 aa2.95□□□□□ -1.94
SIZ1YDR409W MRPL44P19956 98 aa2.95□□□□□ -1.94
SIZ1YDR409W RFA3P26755 122 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W MSK1P32048 576 aa2.95□□□□□ -1.94
SIZ1YDR409W AIM3P38266 947 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W RPS20P38701 121 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W DBP8P38719 431 aa2.95□□□□□ -1.94
SIZ1YDR409W GGC1P38988 300 aa2.95□□□□□ -1.94
SIZ1YDR409W LYS12P40495 371 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W MRPL49P40858 161 aaPredicted RBP2.95□□□□□ -1.94
SIZ1YDR409W VMA21P41806 77 aa2.95□□□□□ -1.94
SIZ1YDR409W AAH1P53909 347 aa2.95□□□□□ -1.94
SIZ1YDR409W YMR265CQ03508 461 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W NOC4Q06512 552 aaPredicted RBP2.95□□□□□ -1.94
SIZ1YDR409W TPO4Q12256 659 aa2.95□□□□□ -1.94
SIZ1YDR409W SSS1P35179 80 aa2.95□□□□□ -1.94
SIZ1YDR409W SRP102P36057 244 aaPredicted RBP2.95□□□□□ -1.94
SIZ1YDR409W YBR013CP38215 129 aa2.95□□□□□ -1.94
SIZ1YDR409W VBA2P38358 474 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W RPP1P38786 293 aa2.95□□□□□ -1.94
SIZ1YDR409W PCL5P38794 229 aa2.95□□□□□ -1.94
SIZ1YDR409W YHR127WP38833 243 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W PIG2P40187 538 aa2.95□□□□□ -1.94
SIZ1YDR409W SIM1P40472 476 aa2.95□□□□□ -1.94
SIZ1YDR409W YJR056CP47115 236 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms