RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W COX1P00401 534 aa1.87□□□□□ -2.11
USO1YDL058W YKR104WP0CE69 306 aa1.87□□□□□ -2.11
USO1YDL058W YAR066WP0CX18 203 aa1.87□□□□□ -2.11
USO1YDL058W YHR214WP0CX19 203 aa1.87□□□□□ -2.11
USO1YDL058W DAT1P13483 248 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W PEX34P25584 144 aa1.87□□□□□ -2.11
USO1YDL058W SPR1P32603 445 aa1.87□□□□□ -2.11
USO1YDL058W MRPL6P32904 214 aa1.87□□□□□ -2.11
USO1YDL058W SNC2P33328 115 aa1.87□□□□□ -2.11
USO1YDL058W ASC1P38011 319 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W YHK8P38776 514 aa1.87□□□□□ -2.11
USO1YDL058W YEL075CP39972 122 aa1.87□□□□□ -2.11
USO1YDL058W GET2P40056 285 aa1.87□□□□□ -2.11
USO1YDL058W EMC5P40540 141 aa1.87□□□□□ -2.11
USO1YDL058W CDC1P40986 491 aa1.87□□□□□ -2.11
USO1YDL058W PTR3P43606 678 aa1.87□□□□□ -2.11
USO1YDL058W YGR045CP53229 120 aa1.87□□□□□ -2.11
USO1YDL058W YNL165WP53891 406 aa1.87□□□□□ -2.11
USO1YDL058W SWS2P53937 143 aa1.87□□□□□ -2.11
USO1YDL058W YDR209CQ03480 137 aa1.87□□□□□ -2.11
USO1YDL058W SPG4Q04438 115 aa1.87□□□□□ -2.11
USO1YDL058W LOA1Q06508 300 aa1.87□□□□□ -2.11
USO1YDL058W RRS1Q08746 203 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W POM33Q12164 279 aa1.87□□□□□ -2.11
USO1YDL058W YOL107WQ12239 342 aa1.87□□□□□ -2.11
USO1YDL058W ISD11Q6Q560 94 aa1.87□□□□□ -2.11
USO1YDL058W YER175W-AQ8TGU4 54 aa1.87□□□□□ -2.11
USO1YDL058W YLL053CP0CD98 152 aa1.87□□□□□ -2.11
USO1YDL058W YCR015CP25616 317 aa1.87□□□□□ -2.11
USO1YDL058W YKR041WP36134 250 aa1.87□□□□□ -2.11
USO1YDL058W ETR1P38071 380 aa1.87□□□□□ -2.11
USO1YDL058W GRE3P38715 327 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
USO1YDL058W YEL068CP39977 110 aa1.87□□□□□ -2.11
USO1YDL058W GTT1P40582 234 aa1.87□□□□□ -2.11
USO1YDL058W GEP7P53171 287 aa1.87□□□□□ -2.11
USO1YDL058W YIP3P53633 176 aa1.87□□□□□ -2.11
USO1YDL058W SNA2P56508 79 aa1.87□□□□□ -2.11
USO1YDL058W PFA5Q03289 374 aa1.87□□□□□ -2.11
USO1YDL058W RCE1Q03530 315 aa1.87□□□□□ -2.11
USO1YDL058W DFG5Q05031 458 aa1.87□□□□□ -2.11
USO1YDL058W THP1Q08231 455 aa1.87□□□□□ -2.11
USO1YDL058W YOR289WQ12012 251 aaPredicted RBP1.87□□□□□ -2.11
USO1YDL058W MRH1Q12117 320 aaPredicted RBP1.87□□□□□ -2.11
USO1YDL058W YDL009CQ12210 107 aa1.87□□□□□ -2.11
USO1YDL058W ERG8P24521 451 aa1.87□□□□□ -2.11
USO1YDL058W ATG22P25568 528 aa1.87□□□□□ -2.11
USO1YDL058W LST4P34239 828 aa1.87□□□□□ -2.11
USO1YDL058W AIM3P38266 947 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W PRE3P38624 215 aa1.87□□□□□ -2.11
USO1YDL058W PSD1P39006 500 aa1.87□□□□□ -2.11
USO1YDL058W SNU13P39990 126 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W BMT5P40493 336 aa1.87□□□□□ -2.11
USO1YDL058W YIL067CP40514 678 aa1.87□□□□□ -2.11
USO1YDL058W YIL059CP40520 121 aa1.87□□□□□ -2.11
USO1YDL058W CFD1P40558 293 aa1.87□□□□□ -2.11
USO1YDL058W YPT11P48559 417 aa1.87□□□□□ -2.11
USO1YDL058W THG1P53215 237 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W ALG9P53868 555 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W APP1P53933 587 aa1.87□□□□□ -2.11
USO1YDL058W YLR152CP54072 576 aa1.87□□□□□ -2.11
USO1YDL058W PRP38Q00723 242 aaPredicted RBP1.87□□□□□ -2.11
USO1YDL058W MRPS8Q03799 155 aa1.87□□□□□ -2.11
USO1YDL058W SMP3Q04174 516 aa1.87□□□□□ -2.11
USO1YDL058W YPR022CQ12139 1133 aa1.87□□□□□ -2.11
USO1YDL058W YPL150WQ12152 901 aa1.87□□□□□ -2.11
USO1YDL058W SVS1Q12254 260 aa1.87□□□□□ -2.11
USO1YDL058W DGK1Q12382 290 aa1.87□□□□□ -2.11
USO1YDL058W STU1P38198 1513 aa1.87□□□□□ -2.11
USO1YDL058W KRE5P22023 1365 aa1.87□□□□□ -2.11
USO1YDL058W VAR1P02381 398 aa1.87□□□□□ -2.11
USO1YDL058W URA5P13298 226 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W MDM10P18409 493 aa1.87□□□□□ -2.11
USO1YDL058W ECM15P35195 104 aa1.87□□□□□ -2.11
USO1YDL058W LYS1P38998 373 aaRIP-Chip data1.87□□□□□ -2.11 RIP-Chip
USO1YDL058W GAA1P39012 614 aa1.87□□□□□ -2.11
USO1YDL058W COX14P39103 70 aa1.87□□□□□ -2.11
USO1YDL058W FAA2P39518 744 aa1.87□□□□□ -2.11
USO1YDL058W AIM22P47051 409 aa1.87□□□□□ -2.11
USO1YDL058W TIS11P47977 285 aa1.87□□□□□ -2.11
USO1YDL058W NIF3P53081 288 aa1.87□□□□□ -2.11
USO1YDL058W CAX4P53223 239 aa1.87□□□□□ -2.11
USO1YDL058W LST7P53237 242 aa1.87□□□□□ -2.11
USO1YDL058W NCE103P53615 221 aa1.87□□□□□ -2.11
USO1YDL058W OST6Q03723 332 aa1.87□□□□□ -2.11
USO1YDL058W SCP1Q08873 200 aa1.87□□□□□ -2.11
USO1YDL058W RPO41P13433 1351 aaKnown RBP1.87□□□□□ -2.11
USO1YDL058W HEM4P06174 275 aa1.86□□□□□ -2.11
USO1YDL058W SIR2P06700 562 aa1.86□□□□□ -2.11
USO1YDL058W RPS18AP0CX55 146 aaKnown RBP1.86□□□□□ -2.11
USO1YDL058W RPS18BP0CX56 146 aaPredicted RBP1.86□□□□□ -2.11
USO1YDL058W URA10P30402 227 aa1.86□□□□□ -2.11
USO1YDL058W UGX2P32772 223 aa1.86□□□□□ -2.11
USO1YDL058W KTI12P34253 313 aaKnown RBP1.86□□□□□ -2.11
USO1YDL058W RPL32P38061 130 aaKnown RBP1.86□□□□□ -2.11
USO1YDL058W MIX23P38162 196 aa1.86□□□□□ -2.11
USO1YDL058W GIP2P40036 548 aa1.86□□□□□ -2.11
USO1YDL058W YFH7P43591 353 aa1.86□□□□□ -2.11
USO1YDL058W MUP1P50276 574 aa1.86□□□□□ -2.11
USO1YDL058W SYF2P53277 215 aaPredicted RBP1.86□□□□□ -2.11
USO1YDL058W YDL109CQ12103 647 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 148.1 ms