RNA–Protein interactions for RNA: YDL011C

YDL011C, Transcript of Dubious open reading frame, yeast

Gene YDL011C, Length 324 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL011C	YDL011C	SGE1	P33335	543 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	MRPL39	P36533	70 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	PRS2	P38620	318 aa	Known RBP	0.71	□□□□□ -2.3
YDL011C	YDL011C	SMB1	P40018	196 aa	Known RBP	0.71	□□□□□ -2.3
YDL011C	YDL011C	AGE2	P40529	298 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	EMC2	P47133	292 aa	Known RBP	0.71	□□□□□ -2.3
YDL011C	YDL011C	SNZ2	P53824	298 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	BUD25	P85052	153 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	YDR209C	Q03480	137 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	SPG4	Q04438	115 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	COX20	Q04935	205 aa		0.71	□□□□□ -2.3
YDL011C	YDL011C	COX2	P00410	251 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	RPL2A	P0CX45	254 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	RPL2B	P0CX46	254 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	GRX2	P17695	143 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	YPT52	P36018	234 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	MRX3	P38172	270 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	GOS1	P38736	223 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	JHD2	P47156	728 aa	Predicted RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	RMR1	P53060	241 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	ALG11	P53954	548 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	ADH6	Q04894	360 aa	Known RBP	0.7	□□□□□ -2.3
YDL011C	YDL011C	SML1	Q04964	104 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	YLR162W	Q06235	118 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	YOR186W	Q08560	144 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	YPL257W	Q08974	193 aa		0.7	□□□□□ -2.3
YDL011C	YDL011C	IPP1	P00817	287 aa	Known RBP	0.69	□□□□□ -2.3
YDL011C	YDL011C	RPL24A	P04449	155 aa	Known RBP	0.69	□□□□□ -2.3
YDL011C	YDL011C	SNA3	P14359	133 aa		0.69	□□□□□ -2.3
YDL011C	YDL011C	EBP2	P36049	427 aa	Known RBP	0.69	□□□□□ -2.3
YDL011C	YDL011C	YHR180W	P38868	163 aa		0.69	□□□□□ -2.3
YDL011C	YDL011C	THO1	P40040	218 aa	Known RBP	0.69	□□□□□ -2.3
YDL011C	YDL011C	ERV25	P54837	211 aa	Known RBP	0.69	□□□□□ -2.3
YDL011C	YDL011C	ARR2	Q06597	130 aa		0.69	□□□□□ -2.3
YDL011C	YDL011C	YPR172W	Q06608	200 aa		0.69	□□□□□ -2.3
YDL011C	YDL011C	PET9	P18239	318 aa	Known RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	HOM6	P31116	359 aa	Known RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	MRPL37	P36532	105 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	YBR096W	P38256	230 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	YAR068W	P39564	161 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	RPL13B	P40212	199 aa	Known RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	YJR079W	P47126	109 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	ERV29	P53337	310 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	RHO3	Q00245	231 aa	Known RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	HEM25	Q07534	307 aa		0.68	□□□□□ -2.3
YDL011C	YDL011C	RRS1	Q08746	203 aa	Known RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	RPL13A	Q12690	199 aa	Predicted RBP	0.68	□□□□□ -2.3
YDL011C	YDL011C	DAL82	P21705	255 aa		0.67	□□□□□ -2.3
YDL011C	YDL011C	GLG2	P47011	380 aa		0.67	□□□□□ -2.3
YDL011C	YDL011C	USE1	P53146	245 aa		0.67	□□□□□ -2.3
YDL011C	YDL011C	TOS8	P53147	276 aa		0.67	□□□□□ -2.3
YDL011C	YDL011C	HTL1	Q9URQ5	78 aa		0.67	□□□□□ -2.3
YDL011C	YDL011C	POL30	P15873	258 aa	Known RBP	0.66	□□□□□ -2.3
YDL011C	YDL011C	SVP26	P38869	228 aa		0.66	□□□□□ -2.3
YDL011C	YDL011C	RPL33B	P41056	107 aa	Known RBP	0.66	□□□□□ -2.3
YDL011C	YDL011C	RPA43	P46669	326 aa		0.66	□□□□□ -2.3
YDL011C	YDL011C	YJR056C	P47115	236 aa		0.66	□□□□□ -2.3
YDL011C	YDL011C	NUP57	P48837	541 aa		0.66	□□□□□ -2.3
YDL011C	YDL011C	YNL046W	P53956	172 aa		0.66	□□□□□ -2.3
YDL011C	YDL011C	NIP7	Q08962	181 aa	Known RBP	0.66	□□□□□ -2.3
YDL011C	YDL011C	RIO1	Q12196	484 aa	Known RBP	0.66	□□□□□ -2.3
YDL011C	YDL011C	FCY2	P17064	533 aa		0.65	□□□□□ -2.31
YDL011C	YDL011C	RNA15	P25299	296 aa	Predicted RBP	0.65	□□□□□ -2.31
YDL011C	YDL011C	RPF1	P38805	295 aa	Known RBP	0.65	□□□□□ -2.31
YDL011C	YDL011C	MEP1	P40260	492 aa		0.65	□□□□□ -2.31
YDL011C	YDL011C	YAR1	P46683	200 aa		0.65	□□□□□ -2.31
YDL011C	YDL011C	MSA1	Q08471	629 aa		0.65	□□□□□ -2.31
YDL011C	YDL011C	YOR020W-A	Q3E824	90 aa		0.65	□□□□□ -2.31
YDL011C	YDL011C	QCR8	P08525	94 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	GPA2	P10823	449 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	UPS2	P35200	230 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	ECM33	P38248	429 aa	Known RBP	0.64	□□□□□ -2.31
YDL011C	YDL011C	RRF1	P38771	230 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	BIG1	P38813	335 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	YHR127W	P38833	243 aa	Known RBP	0.64	□□□□□ -2.31
YDL011C	YDL011C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
YDL011C	YDL011C	PET100	P38958	111 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	TIR3	P40552	269 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	CAT5	P41735	233 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	MPP6	P53725	186 aa	Predicted RBP	0.64	□□□□□ -2.31
YDL011C	YDL011C	YCT1	Q12235	531 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	TPO4	Q12256	659 aa		0.64	□□□□□ -2.31
YDL011C	YDL011C	SNU23	Q12368	194 aa	Predicted RBP	0.64	□□□□□ -2.31
YDL011C	YDL011C	CDC8	P00572	216 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	RSR1	P13856	272 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	TCD1	P38756	429 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	HAM1	P47119	197 aa	Known RBP	0.63	□□□□□ -2.31
YDL011C	YDL011C	BOL2	P53082	120 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	SSQ1	Q05931	657 aa	Predicted RBP	0.63	□□□□□ -2.31
YDL011C	YDL011C	SEI1	Q06058	285 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	SDO1	Q07953	250 aa	Known RBP	0.63	□□□□□ -2.31
YDL011C	YDL011C	BTS1	Q12051	335 aa		0.63	□□□□□ -2.31
YDL011C	YDL011C	ERD2	P18414	219 aa		0.62	□□□□□ -2.31
YDL011C	YDL011C	RPS5	P26783	225 aa	Known RBP	0.62	□□□□□ -2.31
YDL011C	YDL011C	MEI4	P29467	408 aa		0.62	□□□□□ -2.31
YDL011C	YDL011C	FZF1	P32805	299 aa		0.62	□□□□□ -2.31
YDL011C	YDL011C	YBR063C	P38083	404 aa		0.62	□□□□□ -2.31
YDL011C	YDL011C	YMR144W	P40214	342 aa	Known RBP	0.62	□□□□□ -2.31
YDL011C	YDL011C	PGD1	P40356	397 aa		0.62	□□□□□ -2.31
YDL011C	YDL011C	ILM1	P47155	203 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 113.5 ms