RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 COS8P38723 381 aa5.54□□□□□ -1.52
NME1NME1 YER188WP40103 239 aa5.54□□□□□ -1.52
NME1NME1 FAR8Q05040 523 aa5.54□□□□□ -1.52
NME1NME1 CDC123Q05791 360 aa5.54□□□□□ -1.52
NME1NME1 RIB1P38066 345 aa5.53□□□□□ -1.52
NME1NME1 RTC3P38804 111 aaPredicted RBP5.53□□□□□ -1.52
NME1NME1 OST2P46964 130 aa5.53□□□□□ -1.52
NME1NME1 ILM1P47155 203 aa5.53□□□□□ -1.52
NME1NME1 YJR149WP47177 404 aa5.53□□□□□ -1.52
NME1NME1 MIC26P50087 233 aa5.53□□□□□ -1.52
NME1NME1 SSU72P53538 206 aaPredicted RBP5.53□□□□□ -1.52
NME1NME1 YPR172WQ06608 200 aa5.53□□□□□ -1.52
NME1NME1 CLP1Q08685 445 aaPredicted RBP5.53□□□□□ -1.52
NME1NME1 GIS3Q12418 502 aa5.53□□□□□ -1.52
NME1NME1 YBR121C-AP0C5L4 52 aa5.52□□□□□ -1.53
NME1NME1 YKT6P36015 200 aaKnown RBP5.52□□□□□ -1.53
NME1NME1 URA8P38627 578 aaPredicted RBP5.52□□□□□ -1.53
NME1NME1 YGL159WP53110 370 aa5.52□□□□□ -1.53
NME1NME1 GRH1Q04410 372 aaKnown RBP5.52□□□□□ -1.53
NME1NME1 HRT1Q08273 121 aa5.52□□□□□ -1.53
NME1NME1 NCB2Q92317 146 aa5.52□□□□□ -1.53
NME1NME1 SPT3P06844 337 aa5.51□□□□□ -1.53
NME1NME1 DPM1P14020 267 aaKnown RBP5.51□□□□□ -1.53
NME1NME1 ERG24P32462 438 aaKnown RBP5.51□□□□□ -1.53
NME1NME1 MSA2P36157 363 aa5.51□□□□□ -1.53
NME1NME1 BNA7Q04066 261 aa5.51□□□□□ -1.53
NME1NME1 INM2Q05533 292 aa5.51□□□□□ -1.53
NME1NME1 YLR030WQ07967 263 aa5.51□□□□□ -1.53
NME1NME1 STE18P18852 110 aa5.5□□□□□ -1.53
NME1NME1 RMR1P53060 241 aa5.5□□□□□ -1.53
NME1NME1 RSM10Q03201 203 aa5.5□□□□□ -1.53
NME1NME1 SIR4P11978 1358 aa5.5□□□□□ -1.53
NME1NME1 ERG28P40030 148 aa5.49□□□□□ -1.53
NME1NME1 YJL016WP47072 561 aa5.49□□□□□ -1.53
NME1NME1 HAM1P47119 197 aaKnown RBP5.49□□□□□ -1.53
NME1NME1 GRX3Q03835 250 aa5.49□□□□□ -1.53
NME1NME1 PEX12Q04370 399 aa5.49□□□□□ -1.53
NME1NME1 HEM25Q07534 307 aa5.49□□□□□ -1.53
NME1NME1 MSA1Q08471 629 aa5.49□□□□□ -1.53
NME1NME1 YKL183C-AQ3E765 70 aa5.49□□□□□ -1.53
NME1NME1 SAS5Q99314 248 aa5.49□□□□□ -1.53
NME1NME1 TIF34P40217 347 aaKnown RBP5.48□□□□□ -1.53
NME1NME1 YPL257WQ08974 193 aa5.48□□□□□ -1.53
NME1NME1 YPL229WQ99395 206 aa5.48□□□□□ -1.53
NME1NME1 HTL1Q9URQ5 78 aa5.48□□□□□ -1.53
NME1NME1 PRP18P33411 251 aaPredicted RBP5.47□□□□□ -1.53
NME1NME1 CBT1P36038 271 aaPredicted RBP5.47□□□□□ -1.53
NME1NME1 COG3P40094 801 aa5.47□□□□□ -1.53
NME1NME1 CAT5P41735 233 aa5.47□□□□□ -1.53
NME1NME1 FYV6P53913 173 aa5.47□□□□□ -1.53
NME1NME1 TPO4Q12256 659 aa5.47□□□□□ -1.53
NME1NME1 RPL28P02406 149 aaKnown RBP5.46□□□□□ -1.54
NME1NME1 CDC33P07260 213 aaKnown RBP5.46□□□□□ -1.54
NME1NME1 RAD17P48581 401 aa5.46□□□□□ -1.54
NME1NME1 GTR2P53290 341 aa5.46□□□□□ -1.54
NME1NME1 DCN1Q12395 269 aa5.46□□□□□ -1.54
NME1NME1 URA6P15700 204 aa5.45□□□□□ -1.54
NME1NME1 YNL194CP40169 301 aa5.45□□□□□ -1.54
NME1NME1 ARC15P40518 154 aaRIP-Chip data5.45□□□□□ -1.54not detected
NME1NME1 TOS8P53147 276 aa5.45□□□□□ -1.54
NME1NME1 RPL26AP05743 127 aaKnown RBP5.44□□□□□ -1.54
NME1NME1 DSF1P0CX08 502 aa5.44□□□□□ -1.54
NME1NME1 YNR073CP0CX09 502 aa5.44□□□□□ -1.54
NME1NME1 ALG13P53178 202 aa5.44□□□□□ -1.54
NME1NME1 RPL26BP53221 127 aaKnown RBP5.44□□□□□ -1.54
NME1NME1 PEX17P40155 199 aa5.43□□□□□ -1.54
NME1NME1 CGR1P53188 120 aa5.43□□□□□ -1.54
NME1NME1 DIA1P54005 336 aa5.43□□□□□ -1.54
NME1NME1 CDC36P06100 191 aaPredicted RBP5.42□□□□□ -1.54
NME1NME1 ADH3P07246 375 aaKnown RBP5.42□□□□□ -1.54
NME1NME1 FIS1P40515 155 aa5.42□□□□□ -1.54
NME1NME1 NUP57P48837 541 aa5.42□□□□□ -1.54
NME1NME1 CAB4P53332 305 aa5.42□□□□□ -1.54
NME1NME1 MIX17Q03667 156 aa5.42□□□□□ -1.54
NME1NME1 YML108WQ03759 105 aa5.42□□□□□ -1.54
NME1NME1 YML096WQ04489 525 aa5.42□□□□□ -1.54
NME1NME1 RDS3Q06835 107 aaPredicted RBP5.42□□□□□ -1.54
NME1NME1 JLP1Q12358 412 aa5.42□□□□□ -1.54
NME1NME1 ADF1Q2V2Q1 113 aa5.42□□□□□ -1.54
NME1NME1 YOR020W-AQ3E824 90 aa5.42□□□□□ -1.54
NME1NME1 DRS2P39524 1355 aa5.42□□□□□ -1.54
NME1NME1 UTR5P32630 166 aa5.41□□□□□ -1.54
NME1NME1 YPT52P36018 234 aaKnown RBP5.41□□□□□ -1.54
NME1NME1 BRR6P53062 197 aa5.41□□□□□ -1.54
NME1NME1 COX5AP00424 153 aa5.4□□□□□ -1.54
NME1NME1 YHR125WP38831 101 aa5.4□□□□□ -1.54
NME1NME1 YMR279CQ03263 540 aa5.4□□□□□ -1.54
NME1NME1 SSQ1Q05931 657 aaPredicted RBP5.4□□□□□ -1.54
NME1NME1 Q0255P03881 472 aa5.39□□□□□ -1.55
NME1NME1 CCA1P21269 546 aa5.39□□□□□ -1.55
NME1NME1 ADO1P47143 340 aaKnown RBP5.39□□□□□ -1.55
NME1NME1 CWC23P52868 283 aaPredicted RBP5.39□□□□□ -1.55
NME1NME1 ERV29P53337 310 aa5.39□□□□□ -1.55
NME1NME1 SIP3P38717 1229 aa5.38□□□□□ -1.55
NME1NME1 YHL026CP38740 315 aa5.38□□□□□ -1.55
NME1NME1 MGA1P53050 456 aa5.38□□□□□ -1.55
NME1NME1 NIP7Q08962 181 aaKnown RBP5.38□□□□□ -1.55
NME1NME1 RPF1P38805 295 aaKnown RBP5.37□□□□□ -1.55
NME1NME1 YAR068WP39564 161 aa5.37□□□□□ -1.55
NME1NME1 YJR056CP47115 236 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms