RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PMLP29590 882 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
SMAD4-215ENST00000592911 EVCP57679 992 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 MTAPQ13126 283 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 EPHA7Q15375 998 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 NTRK3Q16288 839 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 FAM187BQ17R55 369 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 RTP2Q5QGT7 225 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 AXDND1Q5T1B0 1012 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SPATA31D4Q6ZUB0 917 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 ANKS3Q6ZW76 656 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SYNPOQ8N3V7 929 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SPEM1Q8N4L4 309 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 UROC1Q96N76 676 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 GPR88Q9GZN0 384 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 PARD6AQ9NPB6 346 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 SEMA4GQ9NTN9 838 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 MTRRQ9UBK8 725 aa9.65□□□□□ -0.86
SMAD4-215ENST00000592911 DDX25Q9UHL0 483 aaKnown RBP9.65□□□□□ -0.86
SMAD4-215ENST00000592911 MTF2Q9Y483 593 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-215ENST00000592911 CITO14578 2027 aa9.65□□□□□ -0.87
SMAD4-215ENST00000592911 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 THP07101 528 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 XRCC6P12956 609 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 ARF4P18085 180 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 CXCL12P48061 93 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 NLRP5P59047 1200 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 MBTD1Q05BQ5 628 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 LRRC32Q14392 662 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 AMHR2Q16671 573 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 KRT25Q7Z3Z0 450 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 LONP2Q86WA8 852 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 SLFN12Q8IYM2 578 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 SLC7A14Q8TBB6 771 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 KCNB2Q92953 911 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 LXNQ9BS40 222 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 TRPV4Q9HBA0 871 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 ZFP14Q9HCL3 533 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 PRMT7Q9NVM4 692 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 MIOSQ9NXC5 875 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 VAV3Q9UKW4 847 aa9.64□□□□□ -0.87
SMAD4-215ENST00000592911 MRPS23Q9Y3D9 190 aaKnown RBP9.64□□□□□ -0.87
SMAD4-215ENST00000592911 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 TMEM8BA6NDV4 472 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 INO80B-WBP1J3KQ70 363 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 AKAP3O75969 853 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 RHOP08100 348 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 PTPN2P17706 415 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 PSMC3P17980 439 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 FGFR3P22607 806 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 NPEPPSP55786 919 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 SIM2Q14190 667 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 DGKKQ5KSL6 1271 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 FAM171A1Q5VUB5 890 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 PLA2G4FQ68DD2 849 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 MAP4K3Q8IVH8 894 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 BLIDQ8IZY5 108 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 ITFG1Q8TB96 612 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 TMEM143Q96AN5 459 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 KXD1Q9BQD3 176 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 TRMT61BQ9BVS5 477 aaKnown RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 NXF3Q9H4D5 531 aaKnown RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 C8orf33Q9H7E9 229 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 BRD9Q9H8M2 597 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 HEBP1Q9NRV9 189 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 PCDHGA5Q9Y5G8 931 aa9.63□□□□□ -0.87
SMAD4-215ENST00000592911 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-215ENST00000592911 ANKRD11Q6UB99 2663 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 SHISA7A6NL88 538 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 EML1O00423 815 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 N4BP3O15049 544 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 CCL16O15467 120 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 KIF4AO95239 1232 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 DEXIO95424 95 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 TDP2O95551 362 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 PROS1P07225 676 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 RPL17P18621 184 aaKnown RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 ARL2P36404 184 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 PTGDRQ13258 359 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 BMP2KLQ5H9B9 411 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 SLC8B1Q6J4K2 584 aa9.62□□□□□ -0.87
SMAD4-215ENST00000592911 PRSS55Q6UWB4 352 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-215ENST00000592911 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms