RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 KCTD10Q9H3F6 313 aa5.69□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TOPORSQ9NS56 1045 aaPredicted RBP5.69□□□□□ -1.5
SOX9-AS1-214ENST00000540802 C11orf21Q9P2W6 132 aa5.69□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SORCS3Q9UPU3 1222 aa5.69□□□□□ -1.5
SOX9-AS1-214ENST00000540802 NKTRP30414 1462 aaKnown RBP5.69□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PIK3R4Q99570 1358 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CCDC144AA2RUR9 1427 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 FOXN1O15353 648 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 RECQL4O94761 1208 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LPLP06858 475 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ZFP36P26651 326 aaKnown RBP5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LGALS4P56470 323 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SESN3P58005 492 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SMN1Q16637 294 aaKnown RBP5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 FSCN1Q16658 493 aaKnown RBP5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 IQSEC1Q6DN90 963 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CLRN3Q8NCR9 226 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TTC1Q99614 292 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 NDC1Q9BTX1 674 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 KCNH6Q9H252 994 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 EPC1Q9H2F5 836 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CLCA2Q9UQC9 943 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 HS3ST4Q9Y661 456 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 MYOM2P54296 1465 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ZNF335Q9H4Z2 1342 aaPredicted RBP5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LRRC7Q96NW7 1537 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 KNDC1Q76NI1 1749 aa5.68□□□□□ -1.5
SOX9-AS1-214ENST00000540802 COL4A3Q01955 1670 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TMEM191CA6NGB0 347 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 AHRRA9YTQ3 701 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ULK1O75385 1050 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 GASTP01350 101 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ITGB1P05556 798 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CTSSP25774 331 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 INHBEP58166 350 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 APBA1Q02410 837 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CSRP2Q16527 193 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 UGT8Q16880 541 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TAF7LQ5H9L4 462 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 DRICH1Q6PGQ1 229 aaPredicted RBP5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 XYLT1Q86Y38 959 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CPT1CQ8TCG5 803 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PAWRQ96IZ0 340 aaKnown RBP5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 AGAP2Q99490 1192 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 HDAC5Q9UQL6 1122 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 RPGRIP1LQ68CZ1 1315 aa5.67□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LAMC1P11047 1609 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PIK3C2GO75747 1445 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ASXL1Q8IXJ9 1541 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PRAMEF4O60810 478 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 RAMP2O60895 175 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PPFIA4O75335 1185 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SCAF4O95104 1147 aaKnown RBP5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LAIR1Q6GTX8 287 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TTPALQ9BTX7 342 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 SLC46A2Q9BY10 475 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ZNF768Q9H5H4 540 aaKnown RBP5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 APOBEC2Q9Y235 224 aaKnown RBP5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 EID1Q9Y6B2 187 aa5.66□□□□□ -1.5
SOX9-AS1-214ENST00000540802 PTPRUQ92729 1446 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 NCOA3Q9Y6Q9 1424 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 KIAA1210Q9ULL0 1709 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TBKBP1A7MCY6 615 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ITGA10O75578 1167 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 HSP90B1P14625 803 aaKnown RBP5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 ENPP1P22413 925 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 HSD3B2P26439 372 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 COL10A1Q03692 680 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 STRN3Q13033 797 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LY6G5CQ5SRR4 150 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 BTNL9Q6UXG8 535 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 UBR7Q8N806 425 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 MYEOVQ96EZ4 313 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 RAX2Q96IS3 184 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 DCLRE1CQ96SD1 692 aaKnown RBP5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CDC5LQ99459 802 aaKnown RBP5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 MLST8Q9BVC4 326 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 GPRC5DQ9NZD1 345 aa5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 EIF2B4Q9UI10 523 aaKnown RBP5.65□□□□□ -1.5
SOX9-AS1-214ENST00000540802 TECPR2O15040 1411 aa5.65□□□□□ -1.51
SOX9-AS1-214ENST00000540802 PTCH1Q13635 1447 aa5.65□□□□□ -1.51
SOX9-AS1-214ENST00000540802 ADGRB1O14514 1584 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 PRR5-ARHGAP8B1AHC4 643 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 B5MCH6 92 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 LEFTY2O00292 366 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 APOBEC3AP31941 199 aaPredicted RBP5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 CRHR1P34998 444 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 FAM189BP81408 668 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 ANKS6Q68DC2 871 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 GIMAP6Q6P9H5 292 aa5.64□□□□□ -1.51
SOX9-AS1-214ENST00000540802 HDGFL2Q7Z4V5 671 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms