RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MTMR12Q9C0I1 747 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 SNTG2Q9NY99 539 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 ZC3H11AO75152 810 aaKnown RBP eCLIP16.84■□□□□ 0.29
CTSA-202ENST00000354880 PHACTR2O75167 634 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 VNN1O95497 513 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 GHRP10912 638 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 JAM2P57087 298 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 UBXN11Q5T124 520 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 ARHGEF19Q8IW93 802 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 CD302Q8IX05 232 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 NXF3Q9H4D5 531 aaKnown RBP16.84■□□□□ 0.29
CTSA-202ENST00000354880 AGO3Q9H9G7 860 aaKnown RBP16.84■□□□□ 0.29
CTSA-202ENST00000354880 UBE2TQ9NPD8 197 aaPredicted RBP16.84■□□□□ 0.29
CTSA-202ENST00000354880 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 AIPL1Q9NZN9 384 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 SQORQ9Y6N5 450 aa16.84■□□□□ 0.29
CTSA-202ENST00000354880 TNNC2P02585 160 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 YARSP54577 528 aaKnown RBP16.83■□□□□ 0.28
CTSA-202ENST00000354880 PAK2Q13177 524 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 NCOA4Q13772 614 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 JADE1Q6IE81 842 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 RAD9BQ6WBX8 426 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 PPM1KQ8N3J5 372 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 PLEKHA5Q9HAU0 1116 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.83■□□□□ 0.28
CTSA-202ENST00000354880 PADI3Q9ULW8 664 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 HES2Q9Y543 173 aa16.83■□□□□ 0.28
CTSA-202ENST00000354880 MKI67P46013 3256 aaKnown RBP16.83■□□□□ 0.28
CTSA-202ENST00000354880 RBAK-RBAKDNI3L0D1 243 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 NFICP08651 508 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 CD52P31358 61 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
CTSA-202ENST00000354880 LPIN1Q14693 890 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 MTF1Q14872 753 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 DRAP1Q14919 205 aaPredicted RBP16.82■□□□□ 0.28
CTSA-202ENST00000354880 WDR44Q5JSH3 913 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 C17orf53Q8N3J3 647 aaPredicted RBP16.82■□□□□ 0.28
CTSA-202ENST00000354880 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 OSBPL7Q9BZF2 842 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 ERVK-5Q9HDB9 667 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 C2CD2Q9Y426 696 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 F8VZ95 297 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 CD4P01730 458 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 ZSCAN20P17040 1043 aaPredicted RBP16.82■□□□□ 0.28
CTSA-202ENST00000354880 STAT1P42224 750 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 TMEM132DQ14C87 1099 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 ASIC2Q16515 512 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 ARHGAP44Q17R89 818 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 TRAF7Q6Q0C0 670 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 NT5DC4Q86YG4 428 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 FMNL3Q8IVF7 1028 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 HELQQ8TDG4 1101 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 NHEJ1Q9H9Q4 299 aaPredicted RBP16.82■□□□□ 0.28
CTSA-202ENST00000354880 C1orf112Q9NSG2 853 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 ARHGAP20Q9P2F6 1191 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 IPPQ9Y573 584 aa16.82■□□□□ 0.28
CTSA-202ENST00000354880 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 ZNF500O60304 480 aaPredicted RBP16.81■□□□□ 0.28
CTSA-202ENST00000354880 RECQL4O94761 1208 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 CST3P01034 146 aaPredicted RBP16.81■□□□□ 0.28
CTSA-202ENST00000354880 SERPING1P05155 500 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 MFAP3P55082 362 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 GCNT1Q02742 428 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 ARID5AQ03989 594 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 BFSP2Q13515 415 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 HGSNATQ68CP4 663 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 GPIHBP1Q8IV16 184 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 CCDC170Q8IYT3 715 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
CTSA-202ENST00000354880 TATDN2Q93075 761 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 SNX27Q96L92 541 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 FAM81BQ96LP2 452 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 APOL6Q9BWW8 343 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 GPR88Q9GZN0 384 aa16.81■□□□□ 0.28
CTSA-202ENST00000354880 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 AKAP5P24588 427 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 SOX5P35711 763 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 GJA8P48165 433 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 ATN1P54259 1190 aaPredicted RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 TRPC3Q13507 836 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 TDRD12Q587J7 1177 aaKnown RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 IRF2BP2Q7Z5L9 587 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 KAT5Q92993 513 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 ELMO3Q96BJ8 720 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 KIF12Q96FN5 646 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 CCDC42Q96M95 316 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 KCND1Q9NSA2 647 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 FAM105AQ9NUU6 356 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 PARP2Q9UGN5 583 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 DERAQ9Y315 318 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 EPN1Q9Y6I3 576 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms