RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 GPI8P49018 411 aa-0.72□□□□□ -2.52
snR50snR50 MLC1P53141 149 aa-0.72□□□□□ -2.52
snR50snR50 SLX9P53251 210 aaPredicted RBP-0.72□□□□□ -2.52
snR50snR50 NOP13P53883 403 aaKnown RBP RIP-Chip data-0.72□□□□□ -2.52not detected
snR50snR50 YMR252CQ04814 134 aa-0.72□□□□□ -2.52
snR50snR50 TSR2Q06672 205 aaKnown RBP-0.72□□□□□ -2.52
snR50snR50 YPR203WQ08994 102 aa-0.72□□□□□ -2.52
snR50snR50 MSH5Q12175 901 aa-0.72□□□□□ -2.52
snR50snR50 ACC1Q00955 2233 aaKnown RBP-0.72□□□□□ -2.53
snR50snR50 MET5P47169 1442 aa-0.72□□□□□ -2.53
snR50snR50 YAL064W-BO13512 126 aa-0.73□□□□□ -2.53
snR50snR50 YLR462WO13556 202 aa-0.73□□□□□ -2.53
snR50snR50 RPL31AP0C2H8 113 aaKnown RBP-0.73□□□□□ -2.53
snR50snR50 YLL053CP0CD98 152 aa-0.73□□□□□ -2.53
snR50snR50 SEC22P22214 214 aa-0.73□□□□□ -2.53
snR50snR50 KRR1P25586 316 aaPredicted RBP-0.73□□□□□ -2.53
snR50snR50 RDS1P25611 832 aa-0.73□□□□□ -2.53
snR50snR50 UBC8P28263 218 aa-0.73□□□□□ -2.53
snR50snR50 RPS0AP32905 252 aaKnown RBP-0.73□□□□□ -2.53
snR50snR50 OPY1P38271 328 aa-0.73□□□□□ -2.53
snR50snR50 GDT1P38301 280 aaPredicted RBP-0.73□□□□□ -2.53
snR50snR50 YEL075CP39972 122 aa-0.73□□□□□ -2.53
snR50snR50 HYR1P40581 163 aaKnown RBP-0.73□□□□□ -2.53
snR50snR50 YFH7P43591 353 aa-0.73□□□□□ -2.53
snR50snR50 YGL185CP53100 379 aa-0.73□□□□□ -2.53
snR50snR50 RMT2Q03305 412 aa-0.73□□□□□ -2.53
snR50snR50 YMR209CQ03648 457 aa-0.73□□□□□ -2.53
snR50snR50 COQ10Q08058 207 aa-0.73□□□□□ -2.53
snR50snR50 YOR029WQ12243 111 aa-0.73□□□□□ -2.53
snR50snR50 GPM3Q12326 303 aa-0.73□□□□□ -2.53
snR50snR50 BBP1Q12365 385 aa-0.73□□□□□ -2.53
snR50snR50 YLR307C-AQ3E825 87 aa-0.73□□□□□ -2.53
snR50snR50 JEN1P36035 616 aa-0.74□□□□□ -2.53
snR50snR50 YSW1P38280 609 aa-0.74□□□□□ -2.53
snR50snR50 YBR209WP38311 105 aa-0.74□□□□□ -2.53
snR50snR50 YER189WP40104 122 aa-0.74□□□□□ -2.53
snR50snR50 RPS29BP41058 56 aaKnown RBP-0.74□□□□□ -2.53
snR50snR50 IBA57P47158 497 aa-0.74□□□□□ -2.53
snR50snR50 KNH1P50112 268 aa-0.74□□□□□ -2.53
snR50snR50 YLR460CP54007 376 aa-0.74□□□□□ -2.53
snR50snR50 YDR391CQ04170 232 aa-0.74□□□□□ -2.53
snR50snR50 FAR8Q05040 523 aa-0.74□□□□□ -2.53
snR50snR50 YHR007C-AQ07074 71 aa-0.74□□□□□ -2.53
snR50snR50 SAM4Q08985 325 aaKnown RBP-0.74□□□□□ -2.53
snR50snR50 COA3Q3E7B2 85 aa-0.74□□□□□ -2.53
snR50snR50 YHR213W-BQ8TGK1 99 aa-0.74□□□□□ -2.53
snR50snR50 YDR157WA0A023PZE8 133 aa-0.75□□□□□ -2.53
snR50snR50 RPL4AP10664 362 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 SNA3P14359 133 aa-0.75□□□□□ -2.53
snR50snR50 UBA1P22515 1024 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 EHD3P28817 500 aa-0.75□□□□□ -2.53
snR50snR50 VPS21P36017 210 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 LAS1P36146 502 aaPredicted RBP-0.75□□□□□ -2.53
snR50snR50 YAR064WP39563 99 aa-0.75□□□□□ -2.53
snR50snR50 HHY1P39982 102 aa-0.75□□□□□ -2.53
snR50snR50 RSM25P40496 264 aa-0.75□□□□□ -2.53
snR50snR50 YRB2P40517 327 aa-0.75□□□□□ -2.53
snR50snR50 RPL4BP49626 362 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 KAP114P53067 1004 aa-0.75□□□□□ -2.53
snR50snR50 DOC1P53068 250 aa-0.75□□□□□ -2.53
snR50snR50 EOS1P53938 366 aa-0.75□□□□□ -2.53
snR50snR50 UTP6Q02354 440 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 YCT1Q12235 531 aa-0.75□□□□□ -2.53
snR50snR50 YDR262WQ12331 272 aa-0.75□□□□□ -2.53
snR50snR50 FKS1P38631 1876 aaKnown RBP-0.75□□□□□ -2.53
snR50snR50 STE3P06783 470 aa-0.76□□□□□ -2.53
snR50snR50 YLR157W-EP0CF00 54 aa-0.76□□□□□ -2.53
snR50snR50 RPL43AP0CX25 92 aaKnown RBP-0.76□□□□□ -2.53
snR50snR50 RPL43BP0CX26 92 aa-0.76□□□□□ -2.53
snR50snR50 YCL042WP25572 119 aa-0.76□□□□□ -2.53
snR50snR50 SPT4P32914 102 aaPredicted RBP-0.76□□□□□ -2.53
snR50snR50 RPC37P36121 282 aa-0.76□□□□□ -2.53
snR50snR50 FZO1P38297 855 aa-0.76□□□□□ -2.53
snR50snR50 YHL037CP38733 133 aa-0.76□□□□□ -2.53
snR50snR50 APE4P38821 490 aa-0.76□□□□□ -2.53
snR50snR50 ALP1P38971 573 aa-0.76□□□□□ -2.53
snR50snR50 RPA34P47006 233 aaPredicted RBP-0.76□□□□□ -2.53
snR50snR50 RMR1P53060 241 aa-0.76□□□□□ -2.53
snR50snR50 GTR2P53290 341 aa-0.76□□□□□ -2.53
snR50snR50 GAS3Q03655 524 aa-0.76□□□□□ -2.53
snR50snR50 DBP9Q06218 594 aaKnown RBP-0.76□□□□□ -2.53
snR50snR50 YPR147CQ06522 304 aaKnown RBP-0.76□□□□□ -2.53
snR50snR50 YOS9Q99220 542 aa-0.76□□□□□ -2.53
snR50snR50 ILV1P00927 576 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 RPL6BP05739 176 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 CDC31P06704 161 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 FUR1P18562 216 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 RPT5P33297 434 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 YET1P35723 206 aa-0.77□□□□□ -2.53
snR50snR50 YKL063CP35725 167 aa-0.77□□□□□ -2.53
snR50snR50 YBR242WP38331 238 aa-0.77□□□□□ -2.53
snR50snR50 HIS2P38635 335 aa-0.77□□□□□ -2.53
snR50snR50 DOG2P38773 246 aa-0.77□□□□□ -2.53
snR50snR50 HPA3P39979 161 aa-0.77□□□□□ -2.53
snR50snR50 YEL008WP40001 126 aa-0.77□□□□□ -2.53
snR50snR50 FIS1P40515 155 aa-0.77□□□□□ -2.53
snR50snR50 DCV1P43595 202 aa-0.77□□□□□ -2.53
snR50snR50 YJR056CP47115 236 aa-0.77□□□□□ -2.53
snR50snR50 YGR168CP53293 376 aa-0.77□□□□□ -2.53
snR50snR50 RPL6AQ02326 176 aaKnown RBP-0.77□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms