RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RPI1P23250 407 aaKnown RBP3.72□□□□□ -1.81
VHS3YOR054C LSB5P25369 354 aa3.72□□□□□ -1.81
VHS3YOR054C MIG1P27705 504 aa3.72□□□□□ -1.81
VHS3YOR054C PUB1P32588 453 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
VHS3YOR054C LDB7P38210 180 aa3.72□□□□□ -1.81
VHS3YOR054C FIG1P38224 298 aa3.72□□□□□ -1.81
VHS3YOR054C YPC1P38298 316 aa3.72□□□□□ -1.81
VHS3YOR054C AME1P38313 324 aa3.72□□□□□ -1.81
VHS3YOR054C CUE1P38428 203 aa3.72□□□□□ -1.81
VHS3YOR054C YHR210CP38893 341 aa3.72□□□□□ -1.81
VHS3YOR054C PUG1P40100 303 aa3.72□□□□□ -1.81
VHS3YOR054C LYS12P40495 371 aaKnown RBP3.72□□□□□ -1.81
VHS3YOR054C YGR149WP48236 432 aa3.72□□□□□ -1.81
VHS3YOR054C HSV2P50079 448 aaPredicted RBP3.72□□□□□ -1.81
VHS3YOR054C BNS1P50084 137 aa3.72□□□□□ -1.81
VHS3YOR054C SKP1P52286 194 aa3.72□□□□□ -1.81
VHS3YOR054C YGL204CP53089 101 aa3.72□□□□□ -1.81
VHS3YOR054C SPP2Q02521 185 aa3.72□□□□□ -1.81
VHS3YOR054C GIM5Q04493 163 aa3.72□□□□□ -1.81
VHS3YOR054C ERP1Q05359 219 aaKnown RBP3.72□□□□□ -1.81
VHS3YOR054C BNA5Q05979 453 aa3.72□□□□□ -1.81
VHS3YOR054C RDR1Q08904 546 aa3.72□□□□□ -1.81
VHS3YOR054C PER33Q12144 273 aa3.72□□□□□ -1.81
VHS3YOR054C ICT1Q12385 394 aa3.72□□□□□ -1.81
VHS3YOR054C TFB5Q3E7C1 72 aaPredicted RBP3.72□□□□□ -1.81
VHS3YOR054C YKL033W-AQ86ZR7 236 aa3.72□□□□□ -1.81
VHS3YOR054C ILV5P06168 395 aaKnown RBP3.71□□□□□ -1.81
VHS3YOR054C DED1P06634 604 aaKnown RBP3.71□□□□□ -1.81
VHS3YOR054C YPR170W-BP0C5R9 85 aa3.71□□□□□ -1.81
VHS3YOR054C PAU19P0CE85 124 aa3.71□□□□□ -1.81
VHS3YOR054C PAU21P0CE86 164 aa3.71□□□□□ -1.81
VHS3YOR054C PAU22P0CE87 164 aa3.71□□□□□ -1.81
VHS3YOR054C GPI12P23797 304 aa3.71□□□□□ -1.81
VHS3YOR054C PAU3P25610 124 aa3.71□□□□□ -1.81
VHS3YOR054C ARO2P28777 376 aaKnown RBP3.71□□□□□ -1.81
VHS3YOR054C YPT53P36019 220 aa3.71□□□□□ -1.81
VHS3YOR054C GPI16P38875 610 aa3.71□□□□□ -1.81
VHS3YOR054C MET30P39014 640 aa3.71□□□□□ -1.81
VHS3YOR054C NAS2P40555 220 aa3.71□□□□□ -1.81
VHS3YOR054C MET28P40573 187 aa3.71□□□□□ -1.81
VHS3YOR054C TIS11P47977 285 aa3.71□□□□□ -1.81
VHS3YOR054C YNL034WP53963 612 aa3.71□□□□□ -1.81
VHS3YOR054C MET14Q02196 202 aa3.71□□□□□ -1.81
VHS3YOR054C MET31Q03081 177 aa3.71□□□□□ -1.81
VHS3YOR054C CCE1Q03702 353 aa3.71□□□□□ -1.81
VHS3YOR054C HLR1Q04429 423 aa3.71□□□□□ -1.81
VHS3YOR054C ELP6Q04868 273 aa3.71□□□□□ -1.81
VHS3YOR054C IRC10Q08118 586 aa3.71□□□□□ -1.81
VHS3YOR054C SAL1D6W196 494 aa3.71□□□□□ -1.82
VHS3YOR054C COX3P00420 269 aa3.71□□□□□ -1.82
VHS3YOR054C COX5AP00424 153 aa3.71□□□□□ -1.82
VHS3YOR054C SOD2P00447 233 aa3.71□□□□□ -1.82
VHS3YOR054C ERS1P17261 260 aa3.71□□□□□ -1.82
VHS3YOR054C AFT1P22149 690 aa3.71□□□□□ -1.82
VHS3YOR054C NPR1P22211 790 aa3.71□□□□□ -1.82
VHS3YOR054C GLC7P32598 312 aaKnown RBP3.71□□□□□ -1.82
VHS3YOR054C LOT5P34234 306 aa3.71□□□□□ -1.82
VHS3YOR054C PHO11P35842 467 aa3.71□□□□□ -1.82
VHS3YOR054C VID24P38263 362 aa3.71□□□□□ -1.82
VHS3YOR054C SAF1P38352 637 aa3.71□□□□□ -1.82
VHS3YOR054C PHO12P38693 467 aa3.71□□□□□ -1.82
VHS3YOR054C MNL1P38888 796 aa3.71□□□□□ -1.82
VHS3YOR054C YEL057CP39983 233 aa3.71□□□□□ -1.82
VHS3YOR054C SMB1P40018 196 aaKnown RBP3.71□□□□□ -1.82
VHS3YOR054C PCL7P40186 285 aa3.71□□□□□ -1.82
VHS3YOR054C UBX6P47049 396 aa3.71□□□□□ -1.82
VHS3YOR054C YGR126WP53274 230 aa3.71□□□□□ -1.82
VHS3YOR054C PAU12P53343 120 aa3.71□□□□□ -1.82
VHS3YOR054C DIA1P54005 336 aa3.71□□□□□ -1.82
VHS3YOR054C YPL080CQ02826 108 aa3.71□□□□□ -1.82
VHS3YOR054C MZM1Q03429 123 aaPredicted RBP3.71□□□□□ -1.82
VHS3YOR054C RRP45Q05636 305 aaKnown RBP3.71□□□□□ -1.82
VHS3YOR054C CTS2Q06350 511 aa3.71□□□□□ -1.82
VHS3YOR054C GUD1Q07729 489 aa3.71□□□□□ -1.82
VHS3YOR054C RRT7Q07829 113 aa3.71□□□□□ -1.82
VHS3YOR054C PCL9Q12477 304 aa3.71□□□□□ -1.82
VHS3YOR054C AIM45Q12480 344 aaKnown RBP3.71□□□□□ -1.82
VHS3YOR054C TOR1P35169 2470 aa3.71□□□□□ -1.82
VHS3YOR054C QCR7P00128 127 aa3.7□□□□□ -1.82
VHS3YOR054C TY2A-FP0CX61 438 aa3.7□□□□□ -1.82
VHS3YOR054C TY2A-GR2P0CX62 438 aa3.7□□□□□ -1.82
VHS3YOR054C SST2P11972 698 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C NUP1P20676 1076 aa3.7□□□□□ -1.82
VHS3YOR054C AFG1P32317 509 aa3.7□□□□□ -1.82
VHS3YOR054C MRPS9P38120 278 aa3.7□□□□□ -1.82
VHS3YOR054C THI2P38141 450 aa3.7□□□□□ -1.82
VHS3YOR054C URA8P38627 578 aaPredicted RBP3.7□□□□□ -1.82
VHS3YOR054C RPF1P38805 295 aaKnown RBP3.7□□□□□ -1.82
VHS3YOR054C SPC25P40014 221 aa3.7□□□□□ -1.82
VHS3YOR054C PMT3P47190 753 aa3.7□□□□□ -1.82
VHS3YOR054C VHT1P53241 593 aa3.7□□□□□ -1.82
VHS3YOR054C HST3P53687 447 aa3.7□□□□□ -1.82
VHS3YOR054C YNL184CP53876 108 aa3.7□□□□□ -1.82
VHS3YOR054C SLG1P54867 378 aa3.7□□□□□ -1.82
VHS3YOR054C ADD37Q03233 198 aa3.7□□□□□ -1.82
VHS3YOR054C TMA23Q03525 211 aa3.7□□□□□ -1.82
VHS3YOR054C SPC19Q03954 165 aa3.7□□□□□ -1.82
VHS3YOR054C YDR391CQ04170 232 aa3.7□□□□□ -1.82
VHS3YOR054C AAD4Q07747 329 aa3.7□□□□□ -1.82
VHS3YOR054C TGL5Q12043 749 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms