RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A IFM1P25038 676 aa5.71□□□□□ -1.5
KSH1YNL024C-A LDB16P25587 256 aa5.71□□□□□ -1.5
KSH1YNL024C-A YCR016WP25617 290 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A NAM9P27929 486 aa5.71□□□□□ -1.5
KSH1YNL024C-A TRR1P29509 319 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A MRPL27P36526 146 aaPredicted RBP5.71□□□□□ -1.5
KSH1YNL024C-A CHS7P38843 316 aa5.71□□□□□ -1.5
KSH1YNL024C-A SIT1P39980 628 aa5.71□□□□□ -1.5
KSH1YNL024C-A PHM8P40025 321 aa5.71□□□□□ -1.5
KSH1YNL024C-A SEC24P40482 926 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A YIL060WP40519 144 aa5.71□□□□□ -1.5
KSH1YNL024C-A BUD8P41698 603 aa5.71□□□□□ -1.5
KSH1YNL024C-A ECO1P43605 281 aa5.71□□□□□ -1.5
KSH1YNL024C-A BXI1P48558 297 aa5.71□□□□□ -1.5
KSH1YNL024C-A YIP4P53093 235 aa5.71□□□□□ -1.5
KSH1YNL024C-A PCP1P53259 346 aa5.71□□□□□ -1.5
KSH1YNL024C-A HHT1P61830 136 aa5.71□□□□□ -1.5
KSH1YNL024C-A RPL6AQ02326 176 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A NGL2Q03264 515 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A VBA1Q04301 562 aa5.71□□□□□ -1.5
KSH1YNL024C-A YLR224WQ05947 369 aa5.71□□□□□ -1.5
KSH1YNL024C-A MCT1Q12283 360 aa5.71□□□□□ -1.5
KSH1YNL024C-A YRM1Q12340 786 aa5.71□□□□□ -1.5
KSH1YNL024C-A ODC2Q99297 307 aa5.71□□□□□ -1.5
KSH1YNL024C-A CDC39P25655 2108 aaKnown RBP5.71□□□□□ -1.5
KSH1YNL024C-A PRB1P09232 635 aa5.7□□□□□ -1.5
KSH1YNL024C-A SPS4P09937 338 aa5.7□□□□□ -1.5
KSH1YNL024C-A DSF1P0CX08 502 aa5.7□□□□□ -1.5
KSH1YNL024C-A YNR073CP0CX09 502 aa5.7□□□□□ -1.5
KSH1YNL024C-A ADH7P25377 361 aa5.7□□□□□ -1.5
KSH1YNL024C-A AFG1P32317 509 aa5.7□□□□□ -1.5
KSH1YNL024C-A PPZ2P33329 710 aa5.7□□□□□ -1.5
KSH1YNL024C-A COS9P36034 407 aa5.7□□□□□ -1.5
KSH1YNL024C-A TCM62P38228 572 aaKnown RBP5.7□□□□□ -1.5
KSH1YNL024C-A AIM3P38266 947 aaKnown RBP5.7□□□□□ -1.5
KSH1YNL024C-A UMP1P38293 148 aa5.7□□□□□ -1.5
KSH1YNL024C-A OM14P38325 134 aa5.7□□□□□ -1.5
KSH1YNL024C-A BFR1P38934 470 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
KSH1YNL024C-A TIR3P40552 269 aa5.7□□□□□ -1.5
KSH1YNL024C-A CIN2P46670 268 aa5.7□□□□□ -1.5
KSH1YNL024C-A FMP48P53233 369 aa5.7□□□□□ -1.5
KSH1YNL024C-A SOK2P53438 785 aaPredicted RBP5.7□□□□□ -1.5
KSH1YNL024C-A YDR209CQ03480 137 aa5.7□□□□□ -1.5
KSH1YNL024C-A GIS1Q03833 894 aa5.7□□□□□ -1.5
KSH1YNL024C-A MIX14Q04341 121 aa5.7□□□□□ -1.5
KSH1YNL024C-A COA4Q05809 96 aa5.7□□□□□ -1.5
KSH1YNL024C-A MRX9Q07349 420 aaKnown RBP5.7□□□□□ -1.5
KSH1YNL024C-A YOL024WQ08172 172 aa5.7□□□□□ -1.5
KSH1YNL024C-A USB1Q12208 290 aaKnown RBP5.7□□□□□ -1.5
KSH1YNL024C-A ISA2Q12425 185 aa5.7□□□□□ -1.5
KSH1YNL024C-A TDH3P00359 332 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
KSH1YNL024C-A CBP6P07253 162 aaPredicted RBP5.69□□□□□ -1.5
KSH1YNL024C-A CKS1P20486 150 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A RPB10P22139 70 aa5.69□□□□□ -1.5
KSH1YNL024C-A SOF1P33750 489 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A MGE1P38523 228 aa5.69□□□□□ -1.5
KSH1YNL024C-A VMA7P39111 118 aa5.69□□□□□ -1.5
KSH1YNL024C-A YER137CP40083 148 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A RPL13BP40212 199 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A YMR144WP40214 342 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A OTU1P43558 301 aa5.69□□□□□ -1.5
KSH1YNL024C-A YGR042WP53227 271 aa5.69□□□□□ -1.5
KSH1YNL024C-A PBP1P53297 722 aaKnown RBP5.69□□□□□ -1.5
KSH1YNL024C-A YNR048WP53740 393 aa5.69□□□□□ -1.5
KSH1YNL024C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
KSH1YNL024C-A KAP120Q02932 1032 aa5.69□□□□□ -1.5
KSH1YNL024C-A FEX1Q08913 375 aa5.69□□□□□ -1.5
KSH1YNL024C-A BBP1Q12365 385 aa5.69□□□□□ -1.5
KSH1YNL024C-A RPL13AQ12690 199 aaPredicted RBP5.69□□□□□ -1.5
KSH1YNL024C-A PET20Q99373 253 aa5.69□□□□□ -1.5
KSH1YNL024C-A IPP1P00817 287 aaKnown RBP5.68□□□□□ -1.5
KSH1YNL024C-A PHO2P07269 559 aa5.68□□□□□ -1.5
KSH1YNL024C-A SEN2P16658 377 aa5.68□□□□□ -1.5
KSH1YNL024C-A MDH2P22133 377 aa5.68□□□□□ -1.5
KSH1YNL024C-A DBP2P24783 546 aaKnown RBP5.68□□□□□ -1.5
KSH1YNL024C-A SUA5P32579 426 aa5.68□□□□□ -1.5
KSH1YNL024C-A MRPL39P36533 70 aa5.68□□□□□ -1.5
KSH1YNL024C-A NAT2P37293 288 aa5.68□□□□□ -1.5
KSH1YNL024C-A LAG1P38703 411 aa5.68□□□□□ -1.5
KSH1YNL024C-A ARO9P38840 513 aaPredicted RBP5.68□□□□□ -1.5
KSH1YNL024C-A QDR1P40475 563 aa5.68□□□□□ -1.5
KSH1YNL024C-A YGR210CP42942 411 aa5.68□□□□□ -1.5
KSH1YNL024C-A GNA1P43577 159 aaPredicted RBP5.68□□□□□ -1.5
KSH1YNL024C-A CTK2P46962 323 aa5.68□□□□□ -1.5
KSH1YNL024C-A UBC12P52491 188 aa5.68□□□□□ -1.5
KSH1YNL024C-A YNR040WP53736 256 aa5.68□□□□□ -1.5
KSH1YNL024C-A RNH201P53942 307 aa5.68□□□□□ -1.5
KSH1YNL024C-A ARG5,6Q01217 863 aa5.68□□□□□ -1.5
KSH1YNL024C-A YDR102CQ03864 110 aa5.68□□□□□ -1.5
KSH1YNL024C-A HRI1Q05905 244 aaKnown RBP5.68□□□□□ -1.5
KSH1YNL024C-A HEM25Q07534 307 aa5.68□□□□□ -1.5
KSH1YNL024C-A TMS1Q12116 473 aa5.68□□□□□ -1.5
KSH1YNL024C-A YDR215CQ12240 137 aa5.68□□□□□ -1.5
KSH1YNL024C-A ATG31Q12421 196 aa5.68□□□□□ -1.5
KSH1YNL024C-A ISN1Q99312 450 aa5.68□□□□□ -1.5
KSH1YNL024C-A MES1P00958 751 aaKnown RBP5.67□□□□□ -1.5
KSH1YNL024C-A AAC1P04710 309 aa5.67□□□□□ -1.5
KSH1YNL024C-A RPL30P14120 105 aaKnown RBP5.67□□□□□ -1.5
KSH1YNL024C-A HNM1P19807 563 aa5.67□□□□□ -1.5
KSH1YNL024C-A MAG1P22134 296 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms