RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YCR099CP25657 155 aa6.05□□□□□ -1.44
HDA1YNL021W RPL16BP26785 198 aaKnown RBP6.05□□□□□ -1.44
HDA1YNL021W NTF2P33331 125 aaKnown RBP6.05□□□□□ -1.44
HDA1YNL021W TDA11P38854 504 aa6.05□□□□□ -1.44
HDA1YNL021W MET30P39014 640 aa6.05□□□□□ -1.44
HDA1YNL021W LSM3P57743 89 aaKnown RBP6.05□□□□□ -1.44
HDA1YNL021W PRP38Q00723 242 aaPredicted RBP6.05□□□□□ -1.44
HDA1YNL021W TIM44Q01852 431 aa6.05□□□□□ -1.44
HDA1YNL021W OSH6Q02201 448 aa6.05□□□□□ -1.44
HDA1YNL021W YPR147CQ06522 304 aaKnown RBP6.05□□□□□ -1.44
HDA1YNL021W MFG1Q07684 458 aa6.05□□□□□ -1.44
HDA1YNL021W SNX3Q08826 162 aaKnown RBP6.05□□□□□ -1.44
HDA1YNL021W YPR202WQ08993 238 aa6.05□□□□□ -1.44
HDA1YNL021W TOM1Q03280 3268 aa6.05□□□□□ -1.44
HDA1YNL021W URE2P23202 354 aaKnown RBP6.04□□□□□ -1.44
HDA1YNL021W NAM9P27929 486 aa6.04□□□□□ -1.44
HDA1YNL021W PTM1P32857 523 aa6.04□□□□□ -1.44
HDA1YNL021W SPT4P32914 102 aaPredicted RBP6.04□□□□□ -1.44
HDA1YNL021W MOH1P38191 138 aa6.04□□□□□ -1.44
HDA1YNL021W TRM5P38793 499 aa6.04□□□□□ -1.44
HDA1YNL021W HEM14P40012 539 aa6.04□□□□□ -1.44
HDA1YNL021W YNL010WP53981 241 aaKnown RBP6.04□□□□□ -1.44
HDA1YNL021W TRM82Q03774 444 aa6.04□□□□□ -1.44
HDA1YNL021W YPR114WQ06107 315 aa6.04□□□□□ -1.44
HDA1YNL021W SME1Q12330 94 aaPredicted RBP6.04□□□□□ -1.44
HDA1YNL021W YPL247CQ12523 523 aa6.04□□□□□ -1.44
HDA1YNL021W SRP102P36057 244 aaPredicted RBP6.04□□□□□ -1.44
HDA1YNL021W AVT5P38176 459 aa6.04□□□□□ -1.44
HDA1YNL021W YER137CP40083 148 aaKnown RBP6.04□□□□□ -1.44
HDA1YNL021W SOK1P40317 901 aa6.04□□□□□ -1.44
HDA1YNL021W RMI1Q02685 241 aa6.04□□□□□ -1.44
HDA1YNL021W YPT32P51996 222 aaKnown RBP6.03□□□□□ -1.44
HDA1YNL021W TPN1P53099 579 aa6.03□□□□□ -1.44
HDA1YNL021W ALG13P53178 202 aa6.03□□□□□ -1.44
HDA1YNL021W YGR042WP53227 271 aa6.03□□□□□ -1.44
HDA1YNL021W GTR2P53290 341 aa6.03□□□□□ -1.44
HDA1YNL021W PIR1Q03178 341 aa6.03□□□□□ -1.44
HDA1YNL021W YDR209CQ03480 137 aa6.03□□□□□ -1.44
HDA1YNL021W YET2Q04210 160 aa6.03□□□□□ -1.44
HDA1YNL021W YPD1Q07688 167 aa6.03□□□□□ -1.44
HDA1YNL021W YGK3Q12222 375 aaPredicted RBP6.03□□□□□ -1.44
HDA1YNL021W UTP23Q12339 254 aaKnown RBP6.03□□□□□ -1.44
HDA1YNL021W ICT1Q12385 394 aa6.03□□□□□ -1.44
HDA1YNL021W RNA14P25298 677 aaKnown RBP6.02□□□□□ -1.45
HDA1YNL021W IDH1P28834 360 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
HDA1YNL021W PAN6P40459 309 aa6.02□□□□□ -1.45
HDA1YNL021W MOB1P40484 314 aa6.02□□□□□ -1.45
HDA1YNL021W CIN5P40917 295 aa6.02□□□□□ -1.45
HDA1YNL021W AIM23P47015 356 aa6.02□□□□□ -1.45
HDA1YNL021W YJR056CP47115 236 aa6.02□□□□□ -1.45
HDA1YNL021W CLD1P53264 445 aa6.02□□□□□ -1.45
HDA1YNL021W COS6P53344 381 aa6.02□□□□□ -1.45
HDA1YNL021W IDP3P53982 420 aaKnown RBP6.02□□□□□ -1.45
HDA1YNL021W RPL15BP54780 204 aaPredicted RBP6.02□□□□□ -1.45
HDA1YNL021W CTR3Q06686 241 aa6.02□□□□□ -1.45
HDA1YNL021W UBR1P19812 1950 aa6.02□□□□□ -1.45
HDA1YNL021W CPR5P35176 225 aa6.02□□□□□ -1.45
HDA1YNL021W RPH1P39956 796 aa6.02□□□□□ -1.45
HDA1YNL021W ADO1P47143 340 aaKnown RBP6.02□□□□□ -1.45
HDA1YNL021W NBP35P52920 328 aa6.02□□□□□ -1.45
HDA1YNL021W SWC4P53201 476 aa6.02□□□□□ -1.45
HDA1YNL021W IBD2P53892 351 aa6.02□□□□□ -1.45
HDA1YNL021W SWS2P53937 143 aa6.02□□□□□ -1.45
HDA1YNL021W SUR7P54003 302 aa6.02□□□□□ -1.45
HDA1YNL021W YDR476CQ03362 224 aa6.02□□□□□ -1.45
HDA1YNL021W YCT1Q12235 531 aa6.02□□□□□ -1.45
HDA1YNL021W YER190C-BP0CX94 160 aa6.01□□□□□ -1.45
HDA1YNL021W YEL077W-AP0CX95 160 aa6.01□□□□□ -1.45
HDA1YNL021W YGR296C-BP0CX96 160 aa6.01□□□□□ -1.45
HDA1YNL021W YPL283W-BP0CX97 160 aa6.01□□□□□ -1.45
HDA1YNL021W YPR204C-AP0CX98 160 aa6.01□□□□□ -1.45
HDA1YNL021W PDC2P32896 925 aa6.01□□□□□ -1.45
HDA1YNL021W YOX1P34161 385 aa6.01□□□□□ -1.45
HDA1YNL021W YKL075CP36083 450 aa6.01□□□□□ -1.45
HDA1YNL021W SDS24P38314 527 aa6.01□□□□□ -1.45
HDA1YNL021W PET8P38921 284 aa6.01□□□□□ -1.45
HDA1YNL021W POG1P40473 351 aa6.01□□□□□ -1.45
HDA1YNL021W YKE4P40544 346 aa6.01□□□□□ -1.45
HDA1YNL021W YJR012CP47087 207 aa6.01□□□□□ -1.45
HDA1YNL021W GOT1Q03554 138 aa6.01□□□□□ -1.45
HDA1YNL021W MUM3Q08750 479 aa6.01□□□□□ -1.45
HDA1YNL021W VPH2P32341 215 aa6.01□□□□□ -1.45
HDA1YNL021W RIB5P38145 238 aa6.01□□□□□ -1.45
HDA1YNL021W EFM1P38732 585 aa6.01□□□□□ -1.45
HDA1YNL021W SER33P40510 469 aa6.01□□□□□ -1.45
HDA1YNL021W DIM1P41819 318 aaKnown RBP6.01□□□□□ -1.45
HDA1YNL021W ALB1P47019 175 aaPredicted RBP6.01□□□□□ -1.45
HDA1YNL021W GAS3Q03655 524 aa6.01□□□□□ -1.45
HDA1YNL021W FAR10Q06001 478 aa6.01□□□□□ -1.45
HDA1YNL021W MHR1Q06630 226 aa6.01□□□□□ -1.45
HDA1YNL021W YOR114WQ12219 294 aa6.01□□□□□ -1.45
HDA1YNL021W GTT2Q12390 233 aa6.01□□□□□ -1.45
HDA1YNL021W YDL199CQ12407 687 aa6.01□□□□□ -1.45
HDA1YNL021W QCR2P07257 368 aa6□□□□□ -1.45
HDA1YNL021W AGA1P32323 725 aa6□□□□□ -1.45
HDA1YNL021W FLO5P38894 1075 aa6□□□□□ -1.45
HDA1YNL021W MAM33P40513 266 aa6□□□□□ -1.45
HDA1YNL021W DFG10P40526 253 aa6□□□□□ -1.45
HDA1YNL021W CFD1P40558 293 aa6□□□□□ -1.45
HDA1YNL021W AZF1P41696 914 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 159.3 ms