RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C MPP6P53725 186 aaPredicted RBP2.4□□□□□ -2.03
ATG16YMR159C YDR124WQ04608 324 aa2.4□□□□□ -2.03
ATG16YMR159C RRP36Q12481 300 aaPredicted RBP2.4□□□□□ -2.03
ATG16YMR159C MSF1P08425 469 aa2.39□□□□□ -2.03
ATG16YMR159C PRS4P38063 326 aaPredicted RBP2.39□□□□□ -2.03
ATG16YMR159C SMB1P40018 196 aaKnown RBP2.39□□□□□ -2.03
ATG16YMR159C THO1P40040 218 aaKnown RBP2.39□□□□□ -2.03
ATG16YMR159C YER189WP40104 122 aa2.39□□□□□ -2.03
ATG16YMR159C MRH4P53166 561 aa2.39□□□□□ -2.03
ATG16YMR159C COQ10Q08058 207 aa2.39□□□□□ -2.03
ATG16YMR159C YPR011CQ12251 326 aa2.39□□□□□ -2.03
ATG16YMR159C EHD3P28817 500 aa2.38□□□□□ -2.03
ATG16YMR159C HOM6P31116 359 aaKnown RBP2.38□□□□□ -2.03
ATG16YMR159C RIB7P33312 244 aa2.38□□□□□ -2.03
ATG16YMR159C JEN1P36035 616 aa2.38□□□□□ -2.03
ATG16YMR159C RCN1P36054 211 aa2.38□□□□□ -2.03
ATG16YMR159C COS8P38723 381 aa2.38□□□□□ -2.03
ATG16YMR159C MEP1P40260 492 aa2.38□□□□□ -2.03
ATG16YMR159C YGL034CP53186 121 aa2.38□□□□□ -2.03
ATG16YMR159C KAP95Q06142 861 aaKnown RBP2.38□□□□□ -2.03
ATG16YMR159C YPR147CQ06522 304 aaKnown RBP2.38□□□□□ -2.03
ATG16YMR159C SEC22P22214 214 aa2.37□□□□□ -2.03
ATG16YMR159C YCR102CP25608 368 aa2.37□□□□□ -2.03
ATG16YMR159C FCY21P40039 528 aa2.37□□□□□ -2.03
ATG16YMR159C SNX4P47057 423 aa2.37□□□□□ -2.03
ATG16YMR159C SYC1Q08553 188 aaPredicted RBP2.37□□□□□ -2.03
ATG16YMR159C YLR462WO13556 202 aa2.36□□□□□ -2.03
ATG16YMR159C PUT1P09368 476 aa2.36□□□□□ -2.03
ATG16YMR159C YKR104WP0CE69 306 aa2.36□□□□□ -2.03
ATG16YMR159C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
ATG16YMR159C YHB1P39676 399 aaKnown RBP2.36□□□□□ -2.03
ATG16YMR159C YEL075CP39972 122 aa2.36□□□□□ -2.03
ATG16YMR159C YJL027CP47063 138 aaPredicted RBP2.36□□□□□ -2.03
ATG16YMR159C GOT1Q03554 138 aa2.36□□□□□ -2.03
ATG16YMR159C SDO1Q07953 250 aaKnown RBP2.36□□□□□ -2.03
ATG16YMR159C CSM4Q08955 156 aa2.36□□□□□ -2.03
ATG16YMR159C RNA15P25299 296 aaPredicted RBP2.35□□□□□ -2.03
ATG16YMR159C ARC15P40518 154 aaRIP-Chip data2.35□□□□□ -2.03not detected
ATG16YMR159C SNZ3P43545 298 aa2.35□□□□□ -2.03
ATG16YMR159C GLG2P47011 380 aa2.35□□□□□ -2.03
ATG16YMR159C DAD3P69850 94 aa2.35□□□□□ -2.03
ATG16YMR159C CTF19Q02732 369 aa2.35□□□□□ -2.03
ATG16YMR159C YDR209CQ03480 137 aa2.35□□□□□ -2.03
ATG16YMR159C FAR8Q05040 523 aa2.35□□□□□ -2.03
ATG16YMR159C YPR098CQ06089 161 aa2.35□□□□□ -2.03
ATG16YMR159C BTS1Q12051 335 aa2.35□□□□□ -2.03
ATG16YMR159C Q0255P03881 472 aa2.34□□□□□ -2.03
ATG16YMR159C FZO1P38297 855 aa2.34□□□□□ -2.03
ATG16YMR159C GOS1P38736 223 aa2.34□□□□□ -2.03
ATG16YMR159C BAT2P47176 376 aaKnown RBP2.34□□□□□ -2.03
ATG16YMR159C YMR279CQ03263 540 aa2.34□□□□□ -2.03
ATG16YMR159C SPG4Q04438 115 aa2.34□□□□□ -2.03
ATG16YMR159C YHR086W-AQ3E746 53 aa2.34□□□□□ -2.03
ATG16YMR159C DOA4P32571 926 aa2.33□□□□□ -2.04
ATG16YMR159C YBR096WP38256 230 aa2.33□□□□□ -2.04
ATG16YMR159C BIG1P38813 335 aa2.33□□□□□ -2.04
ATG16YMR159C USE1P53146 245 aa2.33□□□□□ -2.04
ATG16YMR159C RRP40Q08285 240 aaKnown RBP2.33□□□□□ -2.04
ATG16YMR159C YOR186WQ08560 144 aa2.33□□□□□ -2.04
ATG16YMR159C BBP1Q12365 385 aa2.33□□□□□ -2.04
ATG16YMR159C MHT1Q12525 324 aa2.33□□□□□ -2.04
ATG16YMR159C RSR1P13856 272 aa2.32□□□□□ -2.04
ATG16YMR159C MRPL39P36533 70 aa2.32□□□□□ -2.04
ATG16YMR159C DOG1P38774 246 aa2.32□□□□□ -2.04
ATG16YMR159C YGR026WP53217 278 aa2.32□□□□□ -2.04
ATG16YMR159C PRM15Q03262 622 aa2.32□□□□□ -2.04
ATG16YMR159C YLR179CQ06252 201 aaKnown RBP2.32□□□□□ -2.04
ATG16YMR159C ADH3P07246 375 aaKnown RBP2.31□□□□□ -2.04
ATG16YMR159C SGE1P33335 543 aa2.31□□□□□ -2.04
ATG16YMR159C YHR125WP38831 101 aa2.31□□□□□ -2.04
ATG16YMR159C SMD3P43321 101 aaKnown RBP2.31□□□□□ -2.04
ATG16YMR159C SNZ2P53824 298 aa2.31□□□□□ -2.04
ATG16YMR159C YCT1Q12235 531 aa2.31□□□□□ -2.04
ATG16YMR159C SWI1P09547 1314 aa2.31□□□□□ -2.04
ATG16YMR159C COX5AP00424 153 aa2.3□□□□□ -2.04
ATG16YMR159C YPR172WQ06608 200 aa2.3□□□□□ -2.04
ATG16YMR159C YLR030WQ07967 263 aa2.3□□□□□ -2.04
ATG16YMR159C AKR2Q12013 749 aa2.3□□□□□ -2.04
ATG16YMR159C SNU23Q12368 194 aaPredicted RBP2.3□□□□□ -2.04
ATG16YMR159C BOL1Q3E793 110 aa2.3□□□□□ -2.04
ATG16YMR159C RPT5P33297 434 aaKnown RBP2.29□□□□□ -2.04
ATG16YMR159C BFR1P38934 470 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
ATG16YMR159C RMR1P53060 241 aa2.29□□□□□ -2.04
ATG16YMR159C YGL159WP53110 370 aa2.29□□□□□ -2.04
ATG16YMR159C GTR2P53290 341 aa2.29□□□□□ -2.04
ATG16YMR159C RRS1Q08746 203 aaKnown RBP2.29□□□□□ -2.04
ATG16YMR159C MSH5Q12175 901 aa2.29□□□□□ -2.04
ATG16YMR159C YHR032W-AP0C5N6 59 aa2.28□□□□□ -2.04
ATG16YMR159C ERG24P32462 438 aaKnown RBP2.28□□□□□ -2.04
ATG16YMR159C YUH1P35127 236 aa2.28□□□□□ -2.04
ATG16YMR159C MSA2P36157 363 aa2.28□□□□□ -2.04
ATG16YMR159C AYR1P40471 297 aa2.28□□□□□ -2.04
ATG16YMR159C YNL046WP53956 172 aa2.28□□□□□ -2.04
ATG16YMR159C INM2Q05533 292 aa2.28□□□□□ -2.04
ATG16YMR159C RRT8Q08219 342 aa2.28□□□□□ -2.04
ATG16YMR159C YOL107WQ12239 342 aa2.28□□□□□ -2.04
ATG16YMR159C YKL075CP36083 450 aa2.27□□□□□ -2.05
ATG16YMR159C CTR2P38865 189 aa2.27□□□□□ -2.05
ATG16YMR159C YHR127WP38833 243 aaKnown RBP2.26□□□□□ -2.05
ATG16YMR159C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms