RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	RPS5	P26783	225 aa	Known RBP	3.2	□□□□□ -1.9
CDA2	YLR308W	RNP1	P32385	249 aa		3.2	□□□□□ -1.9
CDA2	YLR308W	CUE1	P38428	203 aa		3.2	□□□□□ -1.9
CDA2	YLR308W	SIP3	P38717	1229 aa		3.2	□□□□□ -1.9
CDA2	YLR308W	NBP1	P52919	319 aa	Predicted RBP	3.2	□□□□□ -1.9
CDA2	YLR308W	RHO3	Q00245	231 aa	Known RBP	3.2	□□□□□ -1.9
CDA2	YLR308W	YBL008W-A	Q3E821	79 aa		3.2	□□□□□ -1.9
CDA2	YLR308W	RPS23A	P0CX29	145 aa	Known RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	RPS23B	P0CX30	145 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	RPL24B	P24000	155 aa	Known RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	MAL32	P38158	584 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	YER034W	P40022	185 aa	Known RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	SPO73	P40031	143 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	COX15	P40086	486 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	GLG2	P47011	380 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	YJR141W	P47172	347 aa	Predicted RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	MRH4	P53166	561 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	CGR1	P53188	120 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	MAL12	P53341	584 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	GIM3	P53900	129 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	YPL039W	Q03080	316 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	SPG4	Q04438	115 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	MYO5	Q04439	1219 aa	Known RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	SSQ1	Q05931	657 aa	Predicted RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	PLB3	Q08108	686 aa		3.19	□□□□□ -1.9
CDA2	YLR308W	CLP1	Q08685	445 aa	Predicted RBP	3.19	□□□□□ -1.9
CDA2	YLR308W	MATALPHA1	P0CY06	175 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	HMLALPHA1	P0CY07	175 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	MGM101	P32787	269 aa	Known RBP	3.18	□□□□□ -1.9
CDA2	YLR308W	YJL028W	P47062	111 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	HOC1	P47124	396 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	YGL088W	P53151	121 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	YML108W	Q03759	105 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	SMD2	Q06217	110 aa	Known RBP	3.18	□□□□□ -1.9
CDA2	YLR308W	COQ10	Q08058	207 aa		3.18	□□□□□ -1.9
CDA2	YLR308W	HIS3	P06633	220 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	MET2	P08465	486 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	COS2	P0CX12	379 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	COS3	P0CX13	379 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	YHR127W	P38833	243 aa	Known RBP	3.17	□□□□□ -1.9
CDA2	YLR308W	YJR079W	P47126	109 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
CDA2	YLR308W	SNZ1	Q03148	297 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	YOL019W	Q08157	551 aa		3.17	□□□□□ -1.9
CDA2	YLR308W	RPO26	P20435	155 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	SSO1	P32867	290 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	LDB7	P38210	180 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	GOS1	P38736	223 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	PRE6	P40303	254 aa	Known RBP	3.16	□□□□□ -1.9
CDA2	YLR308W	YJL144W	P47009	104 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	ILM1	P47155	203 aa		3.16	□□□□□ -1.9
CDA2	YLR308W	PPH21	P23594	369 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	PPA2	P28239	310 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	ARC19	P33204	171 aa	Known RBP	3.15	□□□□□ -1.91
CDA2	YLR308W	YKR032W	P36127	104 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	ECM13	P38195	257 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	YER189W	P40104	122 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	YMR144W	P40214	342 aa	Known RBP	3.15	□□□□□ -1.91
CDA2	YLR308W	SNZ3	P43545	298 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	SYF2	P53277	215 aa	Predicted RBP	3.15	□□□□□ -1.91
CDA2	YLR308W	FEX1	Q08913	375 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	FEX2	Q08991	375 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	YBL112C	Q3E7Y4	105 aa		3.15	□□□□□ -1.91
CDA2	YLR308W	RHO1	P06780	209 aa	Known RBP	3.14	□□□□□ -1.91
CDA2	YLR308W	PBN1	P25580	416 aa		3.14	□□□□□ -1.91
CDA2	YLR308W	YRB1	P41920	201 aa	Known RBP	3.14	□□□□□ -1.91
CDA2	YLR308W	HAM1	P47119	197 aa	Known RBP	3.14	□□□□□ -1.91
CDA2	YLR308W	FCF1	Q05498	189 aa	Predicted RBP	3.14	□□□□□ -1.91
CDA2	YLR308W	SPO77	Q06134	477 aa		3.14	□□□□□ -1.91
CDA2	YLR308W	YPL247C	Q12523	523 aa		3.14	□□□□□ -1.91
CDA2	YLR308W	VMA6	P32366	345 aa	Known RBP	3.13	□□□□□ -1.91
CDA2	YLR308W	VPS21	P36017	210 aa	Known RBP	3.13	□□□□□ -1.91
CDA2	YLR308W	YKL075C	P36083	450 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	COS8	P38723	381 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	RTC3	P38804	111 aa	Predicted RBP	3.13	□□□□□ -1.91
CDA2	YLR308W	RPC17	P47076	161 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	JHD2	P47156	728 aa	Predicted RBP	3.13	□□□□□ -1.91
CDA2	YLR308W	RMR1	P53060	241 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	SNZ2	P53824	298 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	YMR166C	Q03829	368 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	FAR8	Q05040	523 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	NCB2	Q92317	146 aa		3.13	□□□□□ -1.91
CDA2	YLR308W	CDC33	P07260	213 aa	Known RBP	3.12	□□□□□ -1.91
CDA2	YLR308W	NHP6B	P11633	99 aa	Known RBP	3.12	□□□□□ -1.91
CDA2	YLR308W	COQ1	P18900	473 aa		3.12	□□□□□ -1.91
CDA2	YLR308W	YPK2	P18961	677 aa		3.12	□□□□□ -1.91
CDA2	YLR308W	TOM40	P23644	387 aa	Known RBP	3.12	□□□□□ -1.91
CDA2	YLR308W	MIG1	P27705	504 aa		3.12	□□□□□ -1.91
CDA2	YLR308W	GDH2	P33327	1092 aa	Known RBP	3.12	□□□□□ -1.91
CDA2	YLR308W	BNA7	Q04066	261 aa		3.12	□□□□□ -1.91
CDA2	YLR308W	EMP46	Q12396	444 aa		3.12	□□□□□ -1.91
CDA2	YLR308W	YLR462W	O13556	202 aa		3.11	□□□□□ -1.91
CDA2	YLR308W	ADH3	P07246	375 aa	Known RBP	3.11	□□□□□ -1.91
CDA2	YLR308W	APA2	P22108	325 aa		3.11	□□□□□ -1.91
CDA2	YLR308W	RME1	P32338	300 aa	Known RBP	3.11	□□□□□ -1.91
CDA2	YLR308W	YGP1	P38616	354 aa	Known RBP	3.11	□□□□□ -1.91
CDA2	YLR308W	YEL075C	P39972	122 aa		3.11	□□□□□ -1.91
CDA2	YLR308W	TIF34	P40217	347 aa	Known RBP	3.11	□□□□□ -1.91
CDA2	YLR308W	YRB2	P40517	327 aa		3.11	□□□□□ -1.91
CDA2	YLR308W	MCM22	P47167	239 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms