RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W PRP24P49960 444 aaKnown RBP3.27□□□□□ -1.89
NUP85YJR042W PHO23P50947 330 aa3.27□□□□□ -1.89
NUP85YJR042W MMS2P53152 137 aa3.27□□□□□ -1.89
NUP85YJR042W NUP49Q02199 472 aa3.27□□□□□ -1.89
NUP85YJR042W ELP3Q02908 557 aaKnown RBP3.27□□□□□ -1.89
NUP85YJR042W TRM82Q03774 444 aa3.27□□□□□ -1.89
NUP85YJR042W MRX9Q07349 420 aaKnown RBP3.27□□□□□ -1.89
NUP85YJR042W DDC1Q08949 612 aa3.27□□□□□ -1.89
NUP85YJR042W RPL4AP10664 362 aaKnown RBP3.26□□□□□ -1.89
NUP85YJR042W FRE2P36033 711 aa3.26□□□□□ -1.89
NUP85YJR042W SDS24P38314 527 aa3.26□□□□□ -1.89
NUP85YJR042W SSH1P38353 490 aaKnown RBP3.26□□□□□ -1.89
NUP85YJR042W CYC2P38909 366 aa3.26□□□□□ -1.89
NUP85YJR042W GIM4P40005 111 aaKnown RBP3.26□□□□□ -1.89
NUP85YJR042W YER076CP40049 302 aa3.26□□□□□ -1.89
NUP85YJR042W SOK1P40317 901 aa3.26□□□□□ -1.89
NUP85YJR042W SNX4P47057 423 aa3.26□□□□□ -1.89
NUP85YJR042W RPL4BP49626 362 aaKnown RBP3.26□□□□□ -1.89
NUP85YJR042W YGR042WP53227 271 aa3.26□□□□□ -1.89
NUP85YJR042W PET191Q02772 108 aa3.26□□□□□ -1.89
NUP85YJR042W YPL034WQ03083 165 aa3.26□□□□□ -1.89
NUP85YJR042W YDR209CQ03480 137 aa3.26□□□□□ -1.89
NUP85YJR042W SCS7Q03529 384 aa3.26□□□□□ -1.89
NUP85YJR042W UTP15Q04305 513 aaKnown RBP3.26□□□□□ -1.89
NUP85YJR042W SSK1Q07084 712 aa3.26□□□□□ -1.89
NUP85YJR042W SFM1Q12314 213 aa3.26□□□□□ -1.89
NUP85YJR042W YDL199CQ12407 687 aa3.26□□□□□ -1.89
NUP85YJR042W COX4P04037 155 aa3.25□□□□□ -1.89
NUP85YJR042W BCY1P07278 416 aaKnown RBP3.25□□□□□ -1.89
NUP85YJR042W ARO7P32178 256 aa3.25□□□□□ -1.89
NUP85YJR042W YMC1P32331 307 aa3.25□□□□□ -1.89
NUP85YJR042W AEP1P32493 518 aa3.25□□□□□ -1.89
NUP85YJR042W CBP4P37267 147 aa3.25□□□□□ -1.89
NUP85YJR042W GEP4P38812 185 aa3.25□□□□□ -1.89
NUP85YJR042W VPS52P39904 641 aa3.25□□□□□ -1.89
NUP85YJR042W YFL012WP43580 148 aa3.25□□□□□ -1.89
NUP85YJR042W IRC18P47056 224 aa3.25□□□□□ -1.89
NUP85YJR042W YJR012CP47087 207 aa3.25□□□□□ -1.89
NUP85YJR042W YPS5P53057 165 aa3.25□□□□□ -1.89
NUP85YJR042W AAT1Q01802 451 aa3.25□□□□□ -1.89
NUP85YJR042W YET2Q04210 160 aa3.25□□□□□ -1.89
NUP85YJR042W GRX8Q05926 109 aa3.25□□□□□ -1.89
NUP85YJR042W NOC4Q06512 552 aaPredicted RBP3.25□□□□□ -1.89
NUP85YJR042W CTR3Q06686 241 aa3.25□□□□□ -1.89
NUP85YJR042W YOL019WQ08157 551 aa3.25□□□□□ -1.89
NUP85YJR042W RDL2Q08742 149 aaKnown RBP3.25□□□□□ -1.89
NUP85YJR042W IES3Q12345 250 aa3.25□□□□□ -1.89
NUP85YJR042W AGC1Q12482 902 aa3.25□□□□□ -1.89
NUP85YJR042W YHR139C-AO13536 103 aa3.25□□□□□ -1.89
NUP85YJR042W GLN3P18494 730 aa3.25□□□□□ -1.89
NUP85YJR042W TIP1P27654 210 aaPredicted RBP3.25□□□□□ -1.89
NUP85YJR042W PCL5P38794 229 aa3.25□□□□□ -1.89
NUP85YJR042W BDH1P39714 382 aa3.25□□□□□ -1.89
NUP85YJR042W YPR127WQ06494 345 aa3.25□□□□□ -1.89
NUP85YJR042W YOR283WQ12040 230 aaKnown RBP3.25□□□□□ -1.89
NUP85YJR042W FCY22Q12119 530 aa3.25□□□□□ -1.89
NUP85YJR042W ICT1Q12385 394 aa3.25□□□□□ -1.89
NUP85YJR042W YMR030W-AQ3E760 96 aa3.25□□□□□ -1.89
NUP85YJR042W RPL28P02406 149 aaKnown RBP3.24□□□□□ -1.89
NUP85YJR042W IFM1P25038 676 aa3.24□□□□□ -1.89
NUP85YJR042W YCR100CP25606 316 aa3.24□□□□□ -1.89
NUP85YJR042W PDC2P32896 925 aa3.24□□□□□ -1.89
NUP85YJR042W TIP20P33891 701 aa3.24□□□□□ -1.89
NUP85YJR042W PDX3P38075 228 aaKnown RBP3.24□□□□□ -1.89
NUP85YJR042W AVT2P39981 480 aa3.24□□□□□ -1.89
NUP85YJR042W HEM14P40012 539 aa3.24□□□□□ -1.89
NUP85YJR042W YER186CP40101 306 aa3.24□□□□□ -1.89
NUP85YJR042W YIL029CP40538 142 aa3.24□□□□□ -1.89
NUP85YJR042W AIM23P47015 356 aa3.24□□□□□ -1.89
NUP85YJR042W YJR030CP47101 745 aa3.24□□□□□ -1.89
NUP85YJR042W MOG1P47123 218 aa3.24□□□□□ -1.89
NUP85YJR042W SLM2P53955 656 aa3.24□□□□□ -1.89
NUP85YJR042W ASI3P53983 676 aa3.24□□□□□ -1.89
NUP85YJR042W SUR7P54003 302 aa3.24□□□□□ -1.89
NUP85YJR042W BET5Q03630 159 aa3.24□□□□□ -1.89
NUP85YJR042W DYN3Q04949 312 aa3.24□□□□□ -1.89
NUP85YJR042W GAS2Q06135 555 aa3.24□□□□□ -1.89
NUP85YJR042W ORM2Q06144 216 aa3.24□□□□□ -1.89
NUP85YJR042W RFU1Q08003 200 aa3.24□□□□□ -1.89
NUP85YJR042W THI72Q08579 599 aa3.24□□□□□ -1.89
NUP85YJR042W RSA1Q08932 381 aa3.24□□□□□ -1.89
NUP85YJR042W FRE8Q12209 686 aa3.24□□□□□ -1.89
NUP85YJR042W TPO4Q12256 659 aa3.24□□□□□ -1.89
NUP85YJR042W YLR126CQ12288 251 aa3.24□□□□□ -1.89
NUP85YJR042W FOL3Q12676 427 aaPredicted RBP3.24□□□□□ -1.89
NUP85YJR042W PPH21P23594 369 aa3.24□□□□□ -1.89
NUP85YJR042W YCR023CP25351 611 aa3.24□□□□□ -1.89
NUP85YJR042W RPL16BP26785 198 aaKnown RBP3.24□□□□□ -1.89
NUP85YJR042W COQ2P32378 372 aa3.24□□□□□ -1.89
NUP85YJR042W UTP11P34247 250 aaPredicted RBP3.24□□□□□ -1.89
NUP85YJR042W SHG1P38337 142 aa3.24□□□□□ -1.89
NUP85YJR042W YHI9P38765 294 aa3.24□□□□□ -1.89
NUP85YJR042W OXA1P39952 402 aa3.24□□□□□ -1.89
NUP85YJR042W IRC24P40580 263 aa3.24□□□□□ -1.89
NUP85YJR042W SBH2P52871 88 aa3.24□□□□□ -1.89
NUP85YJR042W NSA1P53136 463 aaPredicted RBP3.24□□□□□ -1.89
NUP85YJR042W POP6P53218 158 aa3.24□□□□□ -1.89
NUP85YJR042W NRD1P53617 575 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
NUP85YJR042W FMP42Q04991 504 aa3.24□□□□□ -1.89
NUP85YJR042W GLO2Q05584 274 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms