RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEF1	YJR040W	YEF1	P32622	495 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	YHR097C	P38809	366 aa	Known RBP	5.74	□□□□□ -1.49
GEF1	YJR040W	MNL1	P38888	796 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	FLX1	P40464	311 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	IRC24	P40580	263 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	SEC13	Q04491	297 aa	Known RBP	5.74	□□□□□ -1.49
GEF1	YJR040W	YMR310C	Q04867	317 aa	Predicted RBP	5.74	□□□□□ -1.49
GEF1	YJR040W	STP3	Q05937	343 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	YPR127W	Q06494	345 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	MRX9	Q07349	420 aa	Known RBP	5.74	□□□□□ -1.49
GEF1	YJR040W	TRM13	Q12383	476 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	TFC7	Q12415	435 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	TMA17	Q12513	150 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	YGR161W-C	Q3E744	92 aa		5.74	□□□□□ -1.49
GEF1	YJR040W	RPS21B	Q3E754	87 aa	Known RBP	5.74	□□□□□ -1.49
GEF1	YJR040W	HTB1	P02293	131 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	HTB2	P02294	131 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	RPS31	P05759	152 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	UBI4	P0CG63	381 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	RPL40A	P0CH08	128 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	RPL40B	P0CH09	128 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	RPL1A	P0CX43	217 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	RPL1B	P0CX44	217 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	CKA1	P15790	372 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	SNF5	P18480	905 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	PRE9	P23638	258 aa	Known RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	GPI12	P23797	304 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	ERG4	P25340	473 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	AGP1	P25376	633 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	ATS1	P31386	333 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	YNL195C	P40168	261 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	YPS6	P40583	537 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	CIN5	P40917	295 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	RPA34	P47006	233 aa	Predicted RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	SAM37	P50110	327 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	YDR415C	Q04033	374 aa	Predicted RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	NOC4	Q06512	552 aa	Predicted RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	FRE6	Q12473	712 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	YNR034W-A	Q3E841	98 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	ADE8	P04161	214 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	NPR1	P22211	790 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	PUT3	P25502	979 aa	Predicted RBP	5.73	□□□□□ -1.49
GEF1	YJR040W	COQ3	P27680	312 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	PAU2	P32612	120 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	GAT2	P40209	560 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	GLC8	P41818	229 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	YGR042W	P53227	271 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	FIT1	Q04433	528 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	FSH3	Q99369	266 aa		5.73	□□□□□ -1.49
GEF1	YJR040W	CAN1	P04817	590 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	URA6	P15700	204 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	SLY41	P22215	453 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	BET3	P36149	193 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	MRPL16	P38064	232 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	SHG1	P38337	142 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	MGE1	P38523	228 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	PHO90	P39535	881 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	SLZ1	P40167	298 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	CFD1	P40558	293 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	UBX6	P47049	396 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	VHT1	P53241	593 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	FHN1	P53279	174 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	ERG13	P54839	491 aa	Known RBP	5.72	□□□□□ -1.49
GEF1	YJR040W	MRP51	Q02950	344 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	EST3	Q03096	181 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	YLR456W	Q06199	204 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	BER1	Q06688	274 aa	Known RBP	5.72	□□□□□ -1.49
GEF1	YJR040W	PIN2	Q12057	282 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	FYV7	Q12247	151 aa		5.72	□□□□□ -1.49
GEF1	YJR040W	HAP4	P14064	554 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	RNA15	P25299	296 aa	Predicted RBP	5.71	□□□□□ -1.49
GEF1	YJR040W	PET18	P25362	215 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	PBN1	P25580	416 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	YEL068C	P39977	110 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	YGL101W	P53144	215 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	ELP4	Q02884	456 aa	Known RBP	5.71	□□□□□ -1.49
GEF1	YJR040W	MMT2	Q08970	484 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	BTS1	Q12051	335 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	YDL177C	Q12257	170 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	PRM4	Q12498	284 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	FMP27	Q06179	2628 aa		5.71	□□□□□ -1.49
GEF1	YJR040W	RIP1	P08067	215 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	RPL31A	P0C2H8	113 aa	Known RBP	5.71	□□□□□ -1.5
GEF1	YJR040W	RPL31B	P0C2H9	113 aa	Known RBP	5.71	□□□□□ -1.5
GEF1	YJR040W	RPB5	P20434	215 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	IMG1	P25626	169 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	EHD3	P28817	500 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	AIM29	P36154	155 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	MRPL4	P36517	319 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	CHS7	P38843	316 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	UFD1	P53044	361 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	YAP1802	P53309	568 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	BSC6	Q08280	497 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	FDH1	Q08911	376 aa		5.71	□□□□□ -1.5
GEF1	YJR040W	DPM1	P14020	267 aa	Known RBP	5.7	□□□□□ -1.5
GEF1	YJR040W	CBS1	P14066	229 aa		5.7	□□□□□ -1.5
GEF1	YJR040W	CNE1	P27825	502 aa		5.7	□□□□□ -1.5
GEF1	YJR040W	ERG24	P32462	438 aa	Known RBP	5.7	□□□□□ -1.5
GEF1	YJR040W	MRPL11	P36521	249 aa	Predicted RBP	5.7	□□□□□ -1.5
GEF1	YJR040W	YPT31	P38555	223 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 167.4 ms