RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W OST3P48439 350 aa5.36□□□□□ -1.55
SKN1YGR143W YGR168CP53293 376 aa5.36□□□□□ -1.55
SKN1YGR143W YNL095CP53932 642 aa5.36□□□□□ -1.55
SKN1YGR143W YNL092WP53934 400 aa5.36□□□□□ -1.55
SKN1YGR143W TMA23Q03525 211 aa5.36□□□□□ -1.55
SKN1YGR143W PPN1Q04119 674 aa5.36□□□□□ -1.55
SKN1YGR143W ATG33Q06485 197 aa5.36□□□□□ -1.55
SKN1YGR143W LDS2Q08218 356 aa5.36□□□□□ -1.55
SKN1YGR143W RRG7Q08774 242 aaPredicted RBP5.36□□□□□ -1.55
SKN1YGR143W UBX3Q12229 455 aa5.36□□□□□ -1.55
SKN1YGR143W WTM1Q12363 437 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W SUS1Q6WNK7 96 aa5.36□□□□□ -1.55
SKN1YGR143W HRP1Q99383 534 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W VAR1P02381 398 aa5.35□□□□□ -1.55
SKN1YGR143W TIR1P10863 254 aa5.35□□□□□ -1.55
SKN1YGR143W YCR102CP25608 368 aa5.35□□□□□ -1.55
SKN1YGR143W APL3P38065 1025 aa5.35□□□□□ -1.55
SKN1YGR143W SOL3P38858 249 aa5.35□□□□□ -1.55
SKN1YGR143W SKN7P38889 622 aa5.35□□□□□ -1.55
SKN1YGR143W LYS12P40495 371 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W CHA4P43634 648 aa5.35□□□□□ -1.55
SKN1YGR143W TAH11P47112 604 aa5.35□□□□□ -1.55
SKN1YGR143W YLR460CP54007 376 aa5.35□□□□□ -1.55
SKN1YGR143W ECM9Q02202 377 aa5.35□□□□□ -1.55
SKN1YGR143W GPM3Q12326 303 aa5.35□□□□□ -1.55
SKN1YGR143W RPL13AQ12690 199 aaPredicted RBP5.35□□□□□ -1.55
SKN1YGR143W YPL119C-AQ3E751 87 aa5.35□□□□□ -1.55
SKN1YGR143W MHF1Q3E835 90 aa5.35□□□□□ -1.55
SKN1YGR143W MES1P00958 751 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W GDH1P07262 454 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W AMD1P15274 810 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W NOP1P15646 327 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W YCK2P23292 546 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W MEK1P24719 497 aaPredicted RBP5.35□□□□□ -1.55
SKN1YGR143W FEN2P25621 512 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W OCH1P31755 480 aa5.35□□□□□ -1.55
SKN1YGR143W PRP18P33411 251 aaPredicted RBP5.35□□□□□ -1.55
SKN1YGR143W YBR241CP38142 488 aa5.35□□□□□ -1.55
SKN1YGR143W TSL1P38427 1098 aaKnown RBP5.35□□□□□ -1.55
SKN1YGR143W YLR030WQ07967 263 aa5.35□□□□□ -1.55
SKN1YGR143W SWT1Q12104 458 aa5.35□□□□□ -1.55
SKN1YGR143W PEP4P07267 405 aaKnown RBP5.34□□□□□ -1.55
SKN1YGR143W ERD1P16151 362 aa5.34□□□□□ -1.55
SKN1YGR143W DAL82P21705 255 aa5.34□□□□□ -1.55
SKN1YGR143W MCK1P21965 375 aaKnown RBP5.34□□□□□ -1.55
SKN1YGR143W LSB5P25369 354 aa5.34□□□□□ -1.55
SKN1YGR143W MIG1P27705 504 aa5.34□□□□□ -1.55
SKN1YGR143W PPA2P28239 310 aa5.34□□□□□ -1.55
SKN1YGR143W ARP2P32381 391 aaKnown RBP5.34□□□□□ -1.55
SKN1YGR143W MRPL24P36525 258 aaPredicted RBP5.34□□□□□ -1.55
SKN1YGR143W MRPL16P38064 232 aa5.34□□□□□ -1.55
SKN1YGR143W RIB1P38066 345 aa5.34□□□□□ -1.55
SKN1YGR143W RIM2P38127 377 aa5.34□□□□□ -1.55
SKN1YGR143W FLX1P40464 311 aa5.34□□□□□ -1.55
SKN1YGR143W YFL054CP43549 646 aa5.34□□□□□ -1.55
SKN1YGR143W MGA1P53050 456 aa5.34□□□□□ -1.55
SKN1YGR143W LST7P53237 242 aa5.34□□□□□ -1.55
SKN1YGR143W GPI15P53961 229 aa5.34□□□□□ -1.55
SKN1YGR143W CRZ1P53968 678 aa5.34□□□□□ -1.55
SKN1YGR143W TY1A-DR2Q03964 440 aaKnown RBP5.34□□□□□ -1.55
SKN1YGR143W HSP31Q04432 237 aa5.34□□□□□ -1.55
SKN1YGR143W YPR027CQ12079 277 aa5.34□□□□□ -1.55
SKN1YGR143W TPT1Q12272 230 aaKnown RBP5.34□□□□□ -1.55
SKN1YGR143W BI3Q9ZZW7 517 aa5.34□□□□□ -1.55
SKN1YGR143W VPS63O13549 108 aa5.34□□□□□ -1.56
SKN1YGR143W ADK1P07170 222 aaKnown RBP5.34□□□□□ -1.56
SKN1YGR143W RPS25BP0C0T4 108 aaKnown RBP5.34□□□□□ -1.56
SKN1YGR143W DPM1P14020 267 aaKnown RBP5.34□□□□□ -1.56
SKN1YGR143W RPB5P20434 215 aa5.34□□□□□ -1.56
SKN1YGR143W FMT1P32785 401 aa5.34□□□□□ -1.56
SKN1YGR143W TIR2P33890 251 aa5.34□□□□□ -1.56
SKN1YGR143W SCD5P34758 872 aa5.34□□□□□ -1.56
SKN1YGR143W LDB7P38210 180 aa5.34□□□□□ -1.56
SKN1YGR143W CDC55Q00362 526 aa5.34□□□□□ -1.56
SKN1YGR143W APS2Q00381 147 aa5.34□□□□□ -1.56
SKN1YGR143W YOL159CQ08300 171 aa5.34□□□□□ -1.56
SKN1YGR143W MMT2Q08970 484 aa5.34□□□□□ -1.56
SKN1YGR143W YDL177CQ12257 170 aa5.34□□□□□ -1.56
SKN1YGR143W PST2Q12335 198 aaKnown RBP5.34□□□□□ -1.56
SKN1YGR143W RPS25AQ3E792 108 aaPredicted RBP5.34□□□□□ -1.56
SKN1YGR143W YBR121C-AP0C5L4 52 aa5.33□□□□□ -1.56
SKN1YGR143W PCL1P24867 279 aa5.33□□□□□ -1.56
SKN1YGR143W CUE1P38428 203 aa5.33□□□□□ -1.56
SKN1YGR143W GTS1P40956 396 aa5.33□□□□□ -1.56
SKN1YGR143W ERJ5P43613 295 aaPredicted RBP5.33□□□□□ -1.56
SKN1YGR143W MIC26P50087 233 aa5.33□□□□□ -1.56
SKN1YGR143W ERG25P53045 309 aa5.33□□□□□ -1.56
SKN1YGR143W NIF3P53081 288 aa5.33□□□□□ -1.56
SKN1YGR143W OGG1P53397 376 aaPredicted RBP5.33□□□□□ -1.56
SKN1YGR143W CAB5Q03941 241 aa5.33□□□□□ -1.56
SKN1YGR143W MRX8Q05473 314 aa5.33□□□□□ -1.56
SKN1YGR143W DIC1Q06143 298 aa5.33□□□□□ -1.56
SKN1YGR143W GPI11Q06636 219 aa5.33□□□□□ -1.56
SKN1YGR143W YLL056CQ12177 298 aa5.33□□□□□ -1.56
SKN1YGR143W GEP5Q12393 293 aa5.33□□□□□ -1.56
SKN1YGR143W ALG7P07286 448 aa5.32□□□□□ -1.56
SKN1YGR143W PUT1P09368 476 aa5.32□□□□□ -1.56
SKN1YGR143W RPS28BP0C0X0 67 aaKnown RBP5.32□□□□□ -1.56
SKN1YGR143W GCY1P14065 312 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SKN1YGR143W OLE1P21147 510 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms