RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C HOP2P53187 214 aa1.7□□□□□ -2.14
PGD1YGL025C TIM21P53220 239 aa1.7□□□□□ -2.14
PGD1YGL025C ORM1P53224 222 aa1.7□□□□□ -2.14
PGD1YGL025C SLX9P53251 210 aaPredicted RBP1.7□□□□□ -2.14
PGD1YGL025C MAL12P53341 584 aa1.7□□□□□ -2.14
PGD1YGL025C SPP2Q02521 185 aa1.7□□□□□ -2.14
PGD1YGL025C RAD3P06839 778 aa1.69□□□□□ -2.14
PGD1YGL025C ASF2P32448 525 aaPredicted RBP1.69□□□□□ -2.14
PGD1YGL025C SCM4P32564 187 aa1.69□□□□□ -2.14
PGD1YGL025C NUF2P33895 451 aa1.69□□□□□ -2.14
PGD1YGL025C BFR1P38934 470 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
PGD1YGL025C SNX4P47057 423 aa1.69□□□□□ -2.14
PGD1YGL025C RIO1Q12196 484 aaKnown RBP1.69□□□□□ -2.14
PGD1YGL025C PST1Q12355 444 aa1.69□□□□□ -2.14
PGD1YGL025C TY1B-DR4Q07793 1604 aa1.69□□□□□ -2.14
PGD1YGL025C FKS1P38631 1876 aaKnown RBP1.69□□□□□ -2.14
PGD1YGL025C RPO31P04051 1460 aa1.69□□□□□ -2.14
PGD1YGL025C SWI1P09547 1314 aa1.68□□□□□ -2.14
PGD1YGL025C RAD50P12753 1312 aa1.68□□□□□ -2.14
PGD1YGL025C TUS1Q06412 1307 aa1.68□□□□□ -2.14
PGD1YGL025C ARG80P07249 177 aa1.68□□□□□ -2.14
PGD1YGL025C SSA3P09435 649 aaKnown RBP1.68□□□□□ -2.14
PGD1YGL025C SEN2P16658 377 aa1.68□□□□□ -2.14
PGD1YGL025C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
PGD1YGL025C ECM4P36156 370 aa1.68□□□□□ -2.14
PGD1YGL025C MAK5P38112 773 aaPredicted RBP1.68□□□□□ -2.14
PGD1YGL025C YRB1P41920 201 aaKnown RBP1.68□□□□□ -2.14
PGD1YGL025C MRX5P47007 382 aa1.68□□□□□ -2.14
PGD1YGL025C YJL118WP47022 219 aa1.68□□□□□ -2.14
PGD1YGL025C MPP6P53725 186 aaPredicted RBP1.68□□□□□ -2.14
PGD1YGL025C ARO80Q04052 950 aa1.68□□□□□ -2.14
PGD1YGL025C SME1Q12330 94 aaPredicted RBP1.68□□□□□ -2.14
PGD1YGL025C SAS5Q99314 248 aa1.68□□□□□ -2.14
PGD1YGL025C RPL24AP04449 155 aaKnown RBP1.67□□□□□ -2.14
PGD1YGL025C DOA4P32571 926 aa1.67□□□□□ -2.14
PGD1YGL025C MRPL37P36532 105 aa1.67□□□□□ -2.14
PGD1YGL025C PET100P38958 111 aa1.67□□□□□ -2.14
PGD1YGL025C AGE2P40529 298 aa1.67□□□□□ -2.14
PGD1YGL025C SNZ3P43545 298 aa1.67□□□□□ -2.14
PGD1YGL025C EFM5P53200 248 aaKnown RBP1.67□□□□□ -2.14
PGD1YGL025C SNZ2P53824 298 aa1.67□□□□□ -2.14
PGD1YGL025C CWC21Q03375 135 aaKnown RBP1.67□□□□□ -2.14
PGD1YGL025C CTR3Q06686 241 aa1.67□□□□□ -2.14
PGD1YGL025C YOR289WQ12012 251 aaPredicted RBP1.67□□□□□ -2.14
PGD1YGL025C GIS3Q12418 502 aa1.67□□□□□ -2.14
PGD1YGL025C TSC11P40061 1430 aa1.66□□□□□ -2.14
PGD1YGL025C MON2P48563 1636 aaPredicted RBP1.66□□□□□ -2.14
PGD1YGL025C MET16P18408 261 aaPredicted RBP1.66□□□□□ -2.14
PGD1YGL025C APA2P22108 325 aa1.66□□□□□ -2.14
PGD1YGL025C MGM101P32787 269 aaKnown RBP1.66□□□□□ -2.14
PGD1YGL025C YUH1P35127 236 aa1.66□□□□□ -2.14
PGD1YGL025C YKT6P36015 200 aaKnown RBP1.66□□□□□ -2.14
PGD1YGL025C SRL3P36167 246 aa1.66□□□□□ -2.14
PGD1YGL025C EDC3P39998 551 aaKnown RBP1.66□□□□□ -2.14
PGD1YGL025C BNA6P43619 295 aa1.66□□□□□ -2.14
PGD1YGL025C NUP84P52891 726 aa1.66□□□□□ -2.14
PGD1YGL025C YGL034CP53186 121 aa1.66□□□□□ -2.14
PGD1YGL025C MAL13P53338 473 aa1.66□□□□□ -2.14
PGD1YGL025C FUS2Q05670 677 aa1.66□□□□□ -2.14
PGD1YGL025C KAP95Q06142 861 aaKnown RBP1.66□□□□□ -2.14
PGD1YGL025C GMC2Q06201 188 aa1.66□□□□□ -2.14
PGD1YGL025C SLD7Q08457 257 aa1.66□□□□□ -2.14
PGD1YGL025C ABP140Q08641 628 aaKnown RBP1.66□□□□□ -2.14
PGD1YGL025C EMP46Q12396 444 aa1.66□□□□□ -2.14
PGD1YGL025C MMS1Q06211 1407 aa1.66□□□□□ -2.14
PGD1YGL025C MYO4P32492 1471 aa1.65□□□□□ -2.15
PGD1YGL025C CCA1P21269 546 aa1.65□□□□□ -2.15
PGD1YGL025C CWP1P28319 239 aa1.65□□□□□ -2.15
PGD1YGL025C VMA6P32366 345 aaKnown RBP1.65□□□□□ -2.15
PGD1YGL025C RCY1P39531 840 aa1.65□□□□□ -2.15
PGD1YGL025C COA1P40452 197 aa1.65□□□□□ -2.15
PGD1YGL025C YFR054CP43622 192 aa1.65□□□□□ -2.15
PGD1YGL025C OST2P46964 130 aa1.65□□□□□ -2.15
PGD1YGL025C GIM3P53900 129 aa1.65□□□□□ -2.15
PGD1YGL025C RRN5Q02983 363 aa1.65□□□□□ -2.15
PGD1YGL025C PEX10Q05568 337 aa1.65□□□□□ -2.15
PGD1YGL025C YPR011CQ12251 326 aa1.65□□□□□ -2.15
PGD1YGL025C TOP2P06786 1428 aaKnown RBP1.65□□□□□ -2.15
PGD1YGL025C ECM5Q03214 1411 aa1.65□□□□□ -2.15
PGD1YGL025C PEP1P32319 1579 aa1.64□□□□□ -2.15
PGD1YGL025C SPA2P23201 1466 aaKnown RBP1.64□□□□□ -2.15
PGD1YGL025C MSN4P33749 630 aa1.64□□□□□ -2.15
PGD1YGL025C YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
PGD1YGL025C RTC3P38804 111 aaPredicted RBP1.64□□□□□ -2.15
PGD1YGL025C SMD3P43321 101 aaKnown RBP1.64□□□□□ -2.15
PGD1YGL025C APS3P47064 194 aa1.64□□□□□ -2.15
PGD1YGL025C DML1Q03652 475 aa1.64□□□□□ -2.15
PGD1YGL025C RRP17Q04031 235 aaPredicted RBP1.64□□□□□ -2.15
PGD1YGL025C KRE28Q04431 385 aa1.64□□□□□ -2.15
PGD1YGL025C SML1Q04964 104 aa1.64□□□□□ -2.15
PGD1YGL025C RRT8Q08219 342 aa1.64□□□□□ -2.15
PGD1YGL025C ADF1Q2V2Q1 113 aa1.64□□□□□ -2.15
PGD1YGL025C YKL068W-AQ3E826 78 aa1.64□□□□□ -2.15
PGD1YGL025C YPK9Q12697 1472 aa1.63□□□□□ -2.15
PGD1YGL025C CDC36P06100 191 aaPredicted RBP1.63□□□□□ -2.15
PGD1YGL025C PUT1P09368 476 aa1.63□□□□□ -2.15
PGD1YGL025C RPS24AP0CX31 135 aaKnown RBP1.63□□□□□ -2.15
PGD1YGL025C RPS24BP0CX32 135 aaKnown RBP1.63□□□□□ -2.15
PGD1YGL025C SEC14P24280 304 aaKnown RBP1.63□□□□□ -2.15
PGD1YGL025C CDC10P25342 322 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms