RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A MRS1P07266 363 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A DRE2P36152 348 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A PSA1P41940 361 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A MRH4P53166 561 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A HEM25Q07534 307 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A SOL2P37262 315 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A ECM33P38248 429 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A YER186CP40101 306 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A FYV6P53913 173 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A RHO3Q00245 231 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A NUP49Q02199 472 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A YOX1P34161 385 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A MRP21P38175 177 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A PGU1P47180 361 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A HMT1P38074 348 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A POP8P38208 133 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A SEN34P39707 275 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A LSM1P47017 172 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A YJL016WP47072 561 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A NRM1P53718 249 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A HRT3Q12347 344 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A QCR2P07257 368 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A VPH2P32341 215 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A YPT52P36018 234 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A BAT1P38891 393 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A CWC25P53854 179 aaKnown RBP2.37□□□□□ -2.03
YFL002W-AYFL002W-A FMP42Q04991 504 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A FSH2Q05015 223 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A GAS2Q06135 555 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A YLR177WQ06251 628 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A NSL1Q12143 216 aa2.37□□□□□ -2.03
YFL002W-AYFL002W-A URA10P30402 227 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A RMI1Q02685 241 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A YET3Q07451 203 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A YOR283WQ12040 230 aaKnown RBP2.36□□□□□ -2.03
YFL002W-AYFL002W-A PET20Q99373 253 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A TRS65P32893 560 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A ASK1P35734 292 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A MAM33P40513 266 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A AAH1P53909 347 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A DPM1P14020 267 aaKnown RBP2.36□□□□□ -2.03
YFL002W-AYFL002W-A NQM1P53228 333 aaPredicted RBP2.36□□□□□ -2.03
YFL002W-AYFL002W-A SRL1Q08673 210 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A COX5AP00424 153 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A LDS1P31379 325 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A DOG1P38774 246 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A ECM14P38836 430 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A EDC3P39998 551 aaKnown RBP2.36□□□□□ -2.03
YFL002W-AYFL002W-A YER076CP40049 302 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A PEX12Q04370 399 aa2.36□□□□□ -2.03
YFL002W-AYFL002W-A TCA17P32613 152 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A DER1P38307 211 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A PCI8P40512 444 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A REE1P40893 198 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A HAC1P41546 238 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A YJR056CP47115 236 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A BXI1P48558 297 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A SPC2Q04969 178 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A IZH2Q12442 317 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A NAG1Q8TGN9 163 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A HHF1P02309 103 aaKnown RBP2.35□□□□□ -2.03
YFL002W-AYFL002W-A GCN3P14741 305 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A CUP2P15315 225 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A YCR090CP25654 182 aaKnown RBP2.35□□□□□ -2.03
YFL002W-AYFL002W-A RSM25P40496 264 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A CLD1P53264 445 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YFL002W-AYFL002W-A HSK3P69852 69 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A YET2Q04210 160 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A PAL1Q05518 499 aaKnown RBP2.35□□□□□ -2.03
YFL002W-AYFL002W-A YFL064CP43540 174 aa2.35□□□□□ -2.03
YFL002W-AYFL002W-A YGL039WP53183 348 aaKnown RBP2.35□□□□□ -2.03
YFL002W-AYFL002W-A NUF2P33895 451 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A ARN2P38724 620 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A XBP1P40489 647 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A YNL184CP53876 108 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A YMR244WQ04018 355 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A LIP2Q06005 328 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A RRP40Q08285 240 aaKnown RBP2.34□□□□□ -2.03
YFL002W-AYFL002W-A SYC1Q08553 188 aaPredicted RBP2.34□□□□□ -2.03
YFL002W-AYFL002W-A PSK1P31374 1356 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A PEX2P32800 271 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A TIP20P33891 701 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A FMP23P38231 175 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A YGL235WP53071 178 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A YDR248CQ03786 193 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A RDI1Q12434 202 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A YPR147CQ06522 304 aaKnown RBP2.34□□□□□ -2.03
YFL002W-AYFL002W-A EMP46Q12396 444 aa2.34□□□□□ -2.03
YFL002W-AYFL002W-A ELP3Q02908 557 aaKnown RBP2.34□□□□□ -2.04
YFL002W-AYFL002W-A YPL278CQ08990 100 aa2.34□□□□□ -2.04
YFL002W-AYFL002W-A BGL2P15703 313 aaKnown RBP2.33□□□□□ -2.04
YFL002W-AYFL002W-A CSG2P35206 410 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A CAF4P36130 643 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A SEO1P39709 593 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A TIM22Q12328 207 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A TFC7Q12415 435 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A HTZ1Q12692 134 aaKnown RBP2.33□□□□□ -2.04
YFL002W-AYFL002W-A YBL112CQ3E7Y4 105 aa2.33□□□□□ -2.04
YFL002W-AYFL002W-A BMH1P29311 267 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms