RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SPO24Q3E752 67 aa0.72□□□□□ -2.29
YCK3YER123W LAG2Q92325 660 aa0.72□□□□□ -2.29
YCK3YER123W SMI1P32566 505 aa0.71□□□□□ -2.3
YCK3YER123W SWI3P32591 825 aa0.71□□□□□ -2.3
YCK3YER123W ZRT1P32804 376 aa0.71□□□□□ -2.3
YCK3YER123W ADH5P38113 351 aaKnown RBP0.71□□□□□ -2.3
YCK3YER123W APE4P38821 490 aa0.71□□□□□ -2.3
YCK3YER123W POP2P39008 433 aa0.71□□□□□ -2.3
YCK3YER123W SOP4P39543 234 aaPredicted RBP0.71□□□□□ -2.3
YCK3YER123W SYS1P41544 203 aa0.71□□□□□ -2.3
YCK3YER123W YFL064CP43540 174 aa0.71□□□□□ -2.3
YCK3YER123W YGR168CP53293 376 aa0.71□□□□□ -2.3
YCK3YER123W BIO4P53630 237 aa0.71□□□□□ -2.3
YCK3YER123W NOP13P53883 403 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
YCK3YER123W YPL077CQ02831 240 aa0.71□□□□□ -2.3
YCK3YER123W PIR1Q03178 341 aa0.71□□□□□ -2.3
YCK3YER123W NNT1Q05874 261 aa0.71□□□□□ -2.3
YCK3YER123W DBP9Q06218 594 aaKnown RBP0.71□□□□□ -2.3
YCK3YER123W NFI1Q12216 726 aa0.71□□□□□ -2.3
YCK3YER123W YLR046CQ12253 270 aa0.71□□□□□ -2.3
YCK3YER123W YPR064WQ12492 139 aa0.71□□□□□ -2.3
YCK3YER123W RNR2P09938 399 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W YKR104WP0CE69 306 aa0.7□□□□□ -2.3
YCK3YER123W MAK31P23059 88 aa0.7□□□□□ -2.3
YCK3YER123W GCG1P32656 232 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W COT1P32798 439 aa0.7□□□□□ -2.3
YCK3YER123W TRM7P38238 310 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W CUP9P41817 306 aa0.7□□□□□ -2.3
YCK3YER123W PRP24P49960 444 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W YDL144CQ07589 356 aa0.7□□□□□ -2.3
YCK3YER123W RTC5Q12108 567 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W RRP42Q12277 265 aaPredicted RBP0.7□□□□□ -2.3
YCK3YER123W UTP23Q12339 254 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W YHR086W-AQ3E746 53 aa0.7□□□□□ -2.3
YCK3YER123W RPL18AP0CX49 186 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W RPL18BP0CX50 186 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W IFM1P25038 676 aa0.7□□□□□ -2.3
YCK3YER123W YCR025CP25352 136 aa0.7□□□□□ -2.3
YCK3YER123W IMP1P28627 190 aa0.7□□□□□ -2.3
YCK3YER123W MRPL3P36516 390 aa0.7□□□□□ -2.3
YCK3YER123W MBA1P38300 278 aa0.7□□□□□ -2.3
YCK3YER123W GAA1P39012 614 aa0.7□□□□□ -2.3
YCK3YER123W END3P39013 349 aa0.7□□□□□ -2.3
YCK3YER123W AVT6P40074 448 aa0.7□□□□□ -2.3
YCK3YER123W YMR144WP40214 342 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W PRE6P40303 254 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W UTP25P40498 721 aaKnown RBP0.7□□□□□ -2.3
YCK3YER123W YFR054CP43622 192 aa0.7□□□□□ -2.3
YCK3YER123W YJR146WP47174 117 aa0.7□□□□□ -2.3
YCK3YER123W MZM1Q03429 123 aaPredicted RBP0.7□□□□□ -2.3
YCK3YER123W SNX41Q04053 625 aa0.7□□□□□ -2.3
YCK3YER123W YPL150WQ12152 901 aa0.7□□□□□ -2.3
YCK3YER123W YPR1Q12458 312 aa0.7□□□□□ -2.3
YCK3YER123W AGC1Q12482 902 aa0.7□□□□□ -2.3
YCK3YER123W DCP1Q12517 231 aaPredicted RBP0.7□□□□□ -2.3
YCK3YER123W YGR035W-AQ45U48 73 aa0.7□□□□□ -2.3
YCK3YER123W IZH4Q99393 312 aa0.7□□□□□ -2.3
YCK3YER123W FLO9P39712 1322 aa0.69□□□□□ -2.3
YCK3YER123W STF1P01098 86 aa0.69□□□□□ -2.3
YCK3YER123W TCP1P12612 559 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W FRS2P15625 503 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W TRX1P22217 103 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W RPL16BP26785 198 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W YBR062CP38239 180 aa0.69□□□□□ -2.3
YCK3YER123W URA8P38627 578 aaPredicted RBP0.69□□□□□ -2.3
YCK3YER123W ARN2P38724 620 aa0.69□□□□□ -2.3
YCK3YER123W YHR035WP38769 630 aa0.69□□□□□ -2.3
YCK3YER123W RSM25P40496 264 aa0.69□□□□□ -2.3
YCK3YER123W GLG2P47011 380 aa0.69□□□□□ -2.3
YCK3YER123W YJR079WP47126 109 aa0.69□□□□□ -2.3
YCK3YER123W MRS2Q01926 470 aa0.69□□□□□ -2.3
YCK3YER123W TVP15Q03860 143 aa0.69□□□□□ -2.3
YCK3YER123W SPG3Q04398 127 aaPredicted RBP0.69□□□□□ -2.3
YCK3YER123W GRH1Q04410 372 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W YLR297WQ05899 129 aa0.69□□□□□ -2.3
YCK3YER123W SPO77Q06134 477 aa0.69□□□□□ -2.3
YCK3YER123W YLR446WQ06204 433 aa0.69□□□□□ -2.3
YCK3YER123W SMD2Q06217 110 aaKnown RBP0.69□□□□□ -2.3
YCK3YER123W PML1Q07930 204 aaPredicted RBP0.69□□□□□ -2.3
YCK3YER123W RAD7P06779 565 aa0.68□□□□□ -2.3
YCK3YER123W GAL3P13045 520 aa0.68□□□□□ -2.3
YCK3YER123W DPM1P14020 267 aaKnown RBP0.68□□□□□ -2.3
YCK3YER123W TPO5P36029 618 aa0.68□□□□□ -2.3
YCK3YER123W SIP3P38717 1229 aa0.68□□□□□ -2.3
YCK3YER123W YHR045WP38775 560 aa0.68□□□□□ -2.3
YCK3YER123W KRE29P40026 464 aa0.68□□□□□ -2.3
YCK3YER123W SWC4P53201 476 aa0.68□□□□□ -2.3
YCK3YER123W PDR16P53860 351 aaKnown RBP0.68□□□□□ -2.3
YCK3YER123W RHO3Q00245 231 aaKnown RBP0.68□□□□□ -2.3
YCK3YER123W PBP4Q07362 185 aaKnown RBP0.68□□□□□ -2.3
YCK3YER123W GAL7P08431 366 aa0.67□□□□□ -2.3
YCK3YER123W TFS1P14306 219 aa0.67□□□□□ -2.3
YCK3YER123W MSS116P15424 664 aaKnown RBP0.67□□□□□ -2.3
YCK3YER123W OPI1P21957 404 aa0.67□□□□□ -2.3
YCK3YER123W AUA1P32450 94 aa0.67□□□□□ -2.3
YCK3YER123W KDX1P36005 433 aa0.67□□□□□ -2.3
YCK3YER123W MCH2P36032 473 aa0.67□□□□□ -2.3
YCK3YER123W SWD2P36104 329 aaPredicted RBP0.67□□□□□ -2.3
YCK3YER123W GDS1P41913 522 aa0.67□□□□□ -2.3
YCK3YER123W YJL027CP47063 138 aaPredicted RBP0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms