RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W TY3A-IQ99219 290 aa0.83□□□□□ -2.28
LCD1YDR499W HOM6P31116 359 aaKnown RBP0.83□□□□□ -2.28
LCD1YDR499W JEN1P36035 616 aa0.83□□□□□ -2.28
LCD1YDR499W PRS4P38063 326 aaPredicted RBP0.83□□□□□ -2.28
LCD1YDR499W BIG1P38813 335 aa0.83□□□□□ -2.28
LCD1YDR499W CTF19Q02732 369 aa0.83□□□□□ -2.28
LCD1YDR499W SDO1Q07953 250 aaKnown RBP0.83□□□□□ -2.28
LCD1YDR499W COQ10Q08058 207 aa0.83□□□□□ -2.28
LCD1YDR499W RRT8Q08219 342 aa0.83□□□□□ -2.28
LCD1YDR499W YOR283WQ12040 230 aaKnown RBP0.83□□□□□ -2.28
LCD1YDR499W YKR104WP0CE69 306 aa0.82□□□□□ -2.28
LCD1YDR499W RSR1P13856 272 aa0.82□□□□□ -2.28
LCD1YDR499W SCO1P23833 295 aa0.82□□□□□ -2.28
LCD1YDR499W SCM4P32564 187 aa0.82□□□□□ -2.28
LCD1YDR499W YHL026CP38740 315 aa0.82□□□□□ -2.28
LCD1YDR499W SNZ3P43545 298 aa0.82□□□□□ -2.28
LCD1YDR499W DAN1P47178 298 aa0.82□□□□□ -2.28
LCD1YDR499W MRH4P53166 561 aa0.82□□□□□ -2.28
LCD1YDR499W ASI3P53983 676 aa0.82□□□□□ -2.28
LCD1YDR499W YDR209CQ03480 137 aa0.82□□□□□ -2.28
LCD1YDR499W YDR124WQ04608 324 aa0.82□□□□□ -2.28
LCD1YDR499W YPR098CQ06089 161 aa0.82□□□□□ -2.28
LCD1YDR499W ATG17Q06410 417 aa0.82□□□□□ -2.28
LCD1YDR499W YPR147CQ06522 304 aaKnown RBP0.82□□□□□ -2.28
LCD1YDR499W BTS1Q12051 335 aa0.82□□□□□ -2.28
LCD1YDR499W EMC6Q12431 108 aa0.82□□□□□ -2.28
LCD1YDR499W SAS5Q99314 248 aa0.82□□□□□ -2.28
LCD1YDR499W CCA1P21269 546 aa0.81□□□□□ -2.28
LCD1YDR499W YUH1P35127 236 aa0.81□□□□□ -2.28
LCD1YDR499W YBR096WP38256 230 aa0.81□□□□□ -2.28
LCD1YDR499W SSH1P38353 490 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W GRE3P38715 327 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
LCD1YDR499W GOS1P38736 223 aa0.81□□□□□ -2.28
LCD1YDR499W THO1P40040 218 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.81□□□□□ -2.28not detected
LCD1YDR499W SYC1Q08553 188 aaPredicted RBP0.81□□□□□ -2.28
LCD1YDR499W CSM4Q08955 156 aa0.81□□□□□ -2.28
LCD1YDR499W YOL107WQ12239 342 aa0.81□□□□□ -2.28
LCD1YDR499W RNA15P25299 296 aaPredicted RBP0.81□□□□□ -2.28
LCD1YDR499W YCR102CP25608 368 aa0.81□□□□□ -2.28
LCD1YDR499W YHB1P39676 399 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W OST2P46964 130 aa0.81□□□□□ -2.28
LCD1YDR499W USE1P53146 245 aa0.81□□□□□ -2.28
LCD1YDR499W SPG4Q04438 115 aa0.81□□□□□ -2.28
LCD1YDR499W YLR179CQ06252 201 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W RRP40Q08285 240 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W MSH5Q12175 901 aa0.81□□□□□ -2.28
LCD1YDR499W FKS1P38631 1876 aaKnown RBP0.81□□□□□ -2.28
LCD1YDR499W SWI1P09547 1314 aa0.81□□□□□ -2.28
LCD1YDR499W YLR462WO13556 202 aa0.8□□□□□ -2.28
LCD1YDR499W YOR062CP36025 268 aa0.8□□□□□ -2.28
LCD1YDR499W RCN1P36054 211 aa0.8□□□□□ -2.28
LCD1YDR499W NRG2P38082 220 aa0.8□□□□□ -2.28
LCD1YDR499W FZO1P38297 855 aa0.8□□□□□ -2.28
LCD1YDR499W YEL075CP39972 122 aa0.8□□□□□ -2.28
LCD1YDR499W YER189WP40104 122 aa0.8□□□□□ -2.28
LCD1YDR499W SMD3P43321 101 aaKnown RBP0.8□□□□□ -2.28
LCD1YDR499W SNX4P47057 423 aa0.8□□□□□ -2.28
LCD1YDR499W SNZ2P53824 298 aa0.8□□□□□ -2.28
LCD1YDR499W GOT1Q03554 138 aa0.8□□□□□ -2.28
LCD1YDR499W DCR2Q05924 578 aa0.8□□□□□ -2.28
LCD1YDR499W YLR173WQ06247 608 aa0.8□□□□□ -2.28
LCD1YDR499W YOR186WQ08560 144 aa0.8□□□□□ -2.28
LCD1YDR499W YOR029WQ12243 111 aa0.8□□□□□ -2.28
LCD1YDR499W BBP1Q12365 385 aa0.8□□□□□ -2.28
LCD1YDR499W ATG31Q12421 196 aa0.8□□□□□ -2.28
LCD1YDR499W COX5AP00424 153 aa0.8□□□□□ -2.28
LCD1YDR499W Q0255P03881 472 aa0.8□□□□□ -2.28
LCD1YDR499W MSA2P36157 363 aa0.8□□□□□ -2.28
LCD1YDR499W MRPL39P36533 70 aa0.8□□□□□ -2.28
LCD1YDR499W COS8P38723 381 aa0.8□□□□□ -2.28
LCD1YDR499W FCY21P40039 528 aa0.8□□□□□ -2.28
LCD1YDR499W ARC15P40518 154 aaRIP-Chip data0.8□□□□□ -2.28not detected
LCD1YDR499W BNA6P43619 295 aa0.8□□□□□ -2.28
LCD1YDR499W YJL027CP47063 138 aaPredicted RBP0.8□□□□□ -2.28
LCD1YDR499W YJR079WP47126 109 aa0.8□□□□□ -2.28
LCD1YDR499W JHD2P47156 728 aaPredicted RBP0.8□□□□□ -2.28
LCD1YDR499W YGL159WP53110 370 aa0.8□□□□□ -2.28
LCD1YDR499W FAR8Q05040 523 aa0.8□□□□□ -2.28
LCD1YDR499W YLR030WQ07967 263 aa0.8□□□□□ -2.28
LCD1YDR499W RRS1Q08746 203 aaKnown RBP0.8□□□□□ -2.28
LCD1YDR499W YCT1Q12235 531 aa0.8□□□□□ -2.28
LCD1YDR499W YHR086W-AQ3E746 53 aa0.8□□□□□ -2.28
LCD1YDR499W YHR032W-AP0C5N6 59 aa0.79□□□□□ -2.28
LCD1YDR499W TCP1P12612 559 aaKnown RBP0.79□□□□□ -2.28
LCD1YDR499W SGE1P33335 543 aa0.79□□□□□ -2.28
LCD1YDR499W CTR2P38865 189 aa0.79□□□□□ -2.28
LCD1YDR499W BFR1P38934 470 aaKnown RBP RIP-Chip data0.79□□□□□ -2.28not detected
LCD1YDR499W YNL134CP53912 376 aaKnown RBP0.79□□□□□ -2.28
LCD1YDR499W SRL4Q03085 281 aa0.79□□□□□ -2.28
LCD1YDR499W SNU23Q12368 194 aaPredicted RBP0.79□□□□□ -2.28
LCD1YDR499W PUT1P09368 476 aa0.79□□□□□ -2.28
LCD1YDR499W DOA4P32571 926 aa0.79□□□□□ -2.28
LCD1YDR499W HOC1P47124 396 aa0.79□□□□□ -2.28
LCD1YDR499W RHO3Q00245 231 aaKnown RBP0.79□□□□□ -2.28
LCD1YDR499W SEI1Q06058 285 aa0.79□□□□□ -2.28
LCD1YDR499W YPR172WQ06608 200 aa0.79□□□□□ -2.28
LCD1YDR499W PAM18Q07914 168 aa0.79□□□□□ -2.28
LCD1YDR499W AKR2Q12013 749 aa0.79□□□□□ -2.28
LCD1YDR499W MHT1Q12525 324 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms