RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	NAM2	P11325	894 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SPT15	P13393	240 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	HNM1	P19807	563 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ZRC1	P20107	442 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	RPB8	P20436	146 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	PCL1	P24867	279 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SIP1	P32578	815 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YNK1	P36010	153 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	CHK1	P38147	527 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	POP8	P38208	133 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	FAT1	P38225	669 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	UBS1	P38290	277 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	EHT1	P38295	451 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ARC40	P38328	384 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	YIL077C	P40508	320 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	EMC5	P40540	141 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SMK1	P41808	388 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ZIM17	P42844	174 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YFR054C	P43622	192 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	GPI14	P47088	403 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	BRR6	P53062	197 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	CGR1	P53188	120 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YAP1802	P53309	568 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	HHO1	P53551	258 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	NRK1	P53915	240 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YMR210W	Q03649	449 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SPC19	Q03954	165 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	CAC2	Q04199	468 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SNT309	Q06091	175 aa	Predicted RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	YDL086W	Q07505	273 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YOR385W	Q08909	290 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	PET18	P25362	215 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	ADH7	P25377	361 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	MCM10	P32354	571 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	DAL3	P32459	195 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	ECM25	P32525	599 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	PPZ2	P33329	710 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	FMP46	P36141	133 aa	Known RBP	2.67	□□□□□ -1.98
GCD6	YDR211W	YBR013C	P38215	129 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	CDS1	P38221	457 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	FIG1	P38224	298 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	RRP3	P38712	501 aa	Known RBP	2.67	□□□□□ -1.98
GCD6	YDR211W	IKI1	P38874	309 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	SWM2	P40342	146 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	GTT1	P40582	234 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	PHB1	P40961	287 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	VMA21	P41806	77 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	QRI1	P43123	477 aa	Known RBP	2.67	□□□□□ -1.98
GCD6	YDR211W	MOG1	P47123	218 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	BXI1	P48558	297 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	YGL235W	P53071	178 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	YGL204C	P53089	101 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	CTF19	Q02732	369 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	YPR127W	Q06494	345 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	NOC4	Q06512	552 aa	Predicted RBP	2.67	□□□□□ -1.98
GCD6	YDR211W	ERP4	Q12450	207 aa		2.67	□□□□□ -1.98
GCD6	YDR211W	UBI4	P0CG63	381 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RPL40A	P0CH08	128 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RPL40B	P0CH09	128 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RPL1A	P0CX43	217 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RPL1B	P0CX44	217 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	IFM1	P25038	676 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	MXR2	P25566	168 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	PPA2	P28239	310 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	MSK1	P32048	576 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	FMT1	P32785	401 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	NTF2	P33331	125 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	MRPL27	P36526	146 aa	Predicted RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	MNL1	P38888	796 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	LYS1	P38998	373 aa	RIP-Chip data	2.66	□□□□□ -1.98	not detected
GCD6	YDR211W	PGD1	P40356	397 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	BUD8	P41698	603 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	YJR056C	P47115	236 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	DAN1	P47178	298 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	RMD9	P53140	646 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	PNC1	P53184	216 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	OGG1	P53397	376 aa	Predicted RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	ALG9	P53868	555 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	SMX3	P54999	86 aa	Predicted RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	SEC13	Q04491	297 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	YMR253C	Q04835	414 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	USV1	Q12132	391 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	PRS5	Q12265	496 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	YLR146W-A	Q2V2P1	62 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	INH1	P01097	85 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	OPI3	P05375	206 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	URA6	P15700	204 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	SCL1	P21243	252 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	POF1	P25576	258 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	YCR101C	P25607	182 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	FEN2	P25621	512 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	VMA5	P31412	392 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	ARO4	P32449	370 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RML2	P32611	393 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	YBL010C	P32788	280 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
GCD6	YDR211W	SPT10	P35208	640 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	MIA40	P36046	403 aa		2.66	□□□□□ -1.98
GCD6	YDR211W	IMD2	P38697	523 aa	Known RBP	2.66	□□□□□ -1.98
GCD6	YDR211W	RTC3	P38804	111 aa	Predicted RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms