RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C MDM36Q06820 579 aa4.02□□□□□ -1.77
NUP42YDR192C YFH1Q07540 174 aa4.02□□□□□ -1.77
NUP42YDR192C UIP4Q08926 304 aa4.02□□□□□ -1.77
NUP42YDR192C YDR061WQ12298 539 aa4.02□□□□□ -1.77
NUP42YDR192C YCL021W-AQ96VH3 125 aa4.02□□□□□ -1.77
NUP42YDR192C YOS9Q99220 542 aa4.02□□□□□ -1.77
NUP42YDR192C GCN1P33892 2672 aaKnown RBP4.02□□□□□ -1.77
NUP42YDR192C HSP30P25619 332 aa4.01□□□□□ -1.77
NUP42YDR192C AHC2P25649 128 aa4.01□□□□□ -1.77
NUP42YDR192C NRP1P32770 719 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
NUP42YDR192C MRPL4P36517 319 aa4.01□□□□□ -1.77
NUP42YDR192C MLH1P38920 769 aa4.01□□□□□ -1.77
NUP42YDR192C ALB1P47019 175 aaPredicted RBP4.01□□□□□ -1.77
NUP42YDR192C EFM3P47163 339 aa4.01□□□□□ -1.77
NUP42YDR192C PHB2P50085 310 aa4.01□□□□□ -1.77
NUP42YDR192C YLR460CP54007 376 aa4.01□□□□□ -1.77
NUP42YDR192C NUP49Q02199 472 aa4.01□□□□□ -1.77
NUP42YDR192C SNZ1Q03148 297 aa4.01□□□□□ -1.77
NUP42YDR192C MGR3Q04472 501 aa4.01□□□□□ -1.77
NUP42YDR192C SNT309Q06091 175 aaPredicted RBP4.01□□□□□ -1.77
NUP42YDR192C SIA1Q12212 622 aa4.01□□□□□ -1.77
NUP42YDR192C TPO4Q12256 659 aa4.01□□□□□ -1.77
NUP42YDR192C RBD2Q12270 262 aa4.01□□□□□ -1.77
NUP42YDR192C YLR126CQ12288 251 aa4.01□□□□□ -1.77
NUP42YDR192C SFG1Q12507 346 aa4.01□□□□□ -1.77
NUP42YDR192C DCP1Q12517 231 aaPredicted RBP4.01□□□□□ -1.77
NUP42YDR192C YMR230W-AQ3E7B5 62 aa4.01□□□□□ -1.77
NUP42YDR192C TFB5Q3E7C1 72 aaPredicted RBP4.01□□□□□ -1.77
NUP42YDR192C HHF1P02309 103 aaKnown RBP4□□□□□ -1.77
NUP42YDR192C GIT1P25346 518 aa4□□□□□ -1.77
NUP42YDR192C ITR1P30605 584 aa4□□□□□ -1.77
NUP42YDR192C NVJ1P38881 321 aa4□□□□□ -1.77
NUP42YDR192C POP2P39008 433 aa4□□□□□ -1.77
NUP42YDR192C ICE2P40499 491 aa4□□□□□ -1.77
NUP42YDR192C CIS3P47001 227 aa4□□□□□ -1.77
NUP42YDR192C JHD2P47156 728 aaPredicted RBP4□□□□□ -1.77
NUP42YDR192C LSG1P53145 640 aaKnown RBP4□□□□□ -1.77
NUP42YDR192C MTQ1P53944 314 aa4□□□□□ -1.77
NUP42YDR192C SEC13Q04491 297 aaKnown RBP4□□□□□ -1.77
NUP42YDR192C BRX1Q08235 291 aaKnown RBP4□□□□□ -1.77
NUP42YDR192C BSC6Q08280 497 aa4□□□□□ -1.77
NUP42YDR192C YPL119C-AQ3E751 87 aa4□□□□□ -1.77
NUP42YDR192C DET1Q99288 334 aaKnown RBP4□□□□□ -1.77
NUP42YDR192C QCR7P00128 127 aa3.99□□□□□ -1.77
NUP42YDR192C NFT1P0CE68 1218 aa3.99□□□□□ -1.77
NUP42YDR192C QDR3P38227 689 aa3.99□□□□□ -1.77
NUP42YDR192C GPI16P38875 610 aa3.99□□□□□ -1.77
NUP42YDR192C CHL4P38907 458 aa3.99□□□□□ -1.77
NUP42YDR192C FCY21P40039 528 aa3.99□□□□□ -1.77
NUP42YDR192C PRE6P40303 254 aaKnown RBP3.99□□□□□ -1.77
NUP42YDR192C WWM1P43582 211 aaKnown RBP3.99□□□□□ -1.77
NUP42YDR192C YPR127WQ06494 345 aa3.99□□□□□ -1.77
NUP42YDR192C IPK1Q06667 281 aa3.99□□□□□ -1.77
NUP42YDR192C RAX1Q08760 435 aa3.99□□□□□ -1.77
NUP42YDR192C YDL211CQ12121 372 aa3.99□□□□□ -1.77
NUP42YDR192C FRE6Q12473 712 aa3.99□□□□□ -1.77
NUP42YDR192C PSF1Q12488 208 aa3.99□□□□□ -1.77
NUP42YDR192C YOR032W-AQ8TGS1 66 aa3.99□□□□□ -1.77
NUP42YDR192C YOL162WP0CF19 215 aa3.98□□□□□ -1.77
NUP42YDR192C CPR4P25334 318 aa3.98□□□□□ -1.77
NUP42YDR192C CHA1P25379 360 aaKnown RBP3.98□□□□□ -1.77
NUP42YDR192C ARO2P28777 376 aaKnown RBP3.98□□□□□ -1.77
NUP42YDR192C PMT2P31382 759 aa3.98□□□□□ -1.77
NUP42YDR192C ECT1P33412 323 aa3.98□□□□□ -1.77
NUP42YDR192C MSN4P33749 630 aa3.98□□□□□ -1.77
NUP42YDR192C PAD1P33751 242 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
NUP42YDR192C YBL059WP34224 193 aa3.98□□□□□ -1.77
NUP42YDR192C JEN1P36035 616 aa3.98□□□□□ -1.77
NUP42YDR192C SHE2P36068 246 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
NUP42YDR192C NCA3P46955 337 aa3.98□□□□□ -1.77
NUP42YDR192C YAE1P47118 141 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C YJR141WP47172 347 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C TRM9P49957 279 aa3.98□□□□□ -1.77
NUP42YDR192C YGL235WP53071 178 aa3.98□□□□□ -1.77
NUP42YDR192C PXR1P53335 271 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C GIM3P53900 129 aa3.98□□□□□ -1.77
NUP42YDR192C YDR249CQ03787 373 aa3.98□□□□□ -1.77
NUP42YDR192C YDR286CQ05530 114 aa3.98□□□□□ -1.77
NUP42YDR192C YPR174CQ06616 221 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C YOR289WQ12012 251 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C YGK3Q12222 375 aaPredicted RBP3.98□□□□□ -1.77
NUP42YDR192C STF1P01098 86 aa3.97□□□□□ -1.77
NUP42YDR192C CAR2P07991 424 aaKnown RBP3.97□□□□□ -1.77
NUP42YDR192C ARF1P11076 181 aaKnown RBP3.97□□□□□ -1.77
NUP42YDR192C CAP2P13517 287 aa3.97□□□□□ -1.77
NUP42YDR192C RPL24BP24000 155 aaKnown RBP3.97□□□□□ -1.77
NUP42YDR192C KRE6P32486 720 aa3.97□□□□□ -1.77
NUP42YDR192C YKL071WP36086 256 aa3.97□□□□□ -1.77
NUP42YDR192C MBA1P38300 278 aa3.97□□□□□ -1.77
NUP42YDR192C WSC4P38739 605 aa3.97□□□□□ -1.77
NUP42YDR192C FET3P38993 636 aa3.97□□□□□ -1.77
NUP42YDR192C AIM10P39965 576 aaKnown RBP3.97□□□□□ -1.77
NUP42YDR192C PRM5P40476 318 aa3.97□□□□□ -1.77
NUP42YDR192C FMC1P40491 155 aa3.97□□□□□ -1.77
NUP42YDR192C YIL086CP40503 102 aa3.97□□□□□ -1.77
NUP42YDR192C GDS1P41913 522 aa3.97□□□□□ -1.77
NUP42YDR192C SER2P42941 309 aa3.97□□□□□ -1.77
NUP42YDR192C CDH1P53197 566 aa3.97□□□□□ -1.77
NUP42YDR192C RRN9P53437 365 aa3.97□□□□□ -1.77
NUP42YDR192C HXT11P54862 567 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 239.6 ms