RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C YBL059WP34224 193 aa0.7□□□□□ -2.3
SEC1YDR164C UTP30P36144 274 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C YCR087C-AP37263 153 aa0.7□□□□□ -2.3
SEC1YDR164C SHE1P38200 338 aa0.7□□□□□ -2.3
SEC1YDR164C TRM7P38238 310 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C IML3P38265 245 aa0.7□□□□□ -2.3
SEC1YDR164C OM14P38325 134 aa0.7□□□□□ -2.3
SEC1YDR164C YHR045WP38775 560 aa0.7□□□□□ -2.3
SEC1YDR164C YHK8P38776 514 aa0.7□□□□□ -2.3
SEC1YDR164C RTC3P38804 111 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C YPT35P38815 214 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C IPT1P38954 527 aa0.7□□□□□ -2.3
SEC1YDR164C VMA7P39111 118 aa0.7□□□□□ -2.3
SEC1YDR164C SSO2P39926 295 aa0.7□□□□□ -2.3
SEC1YDR164C RRG9P40156 214 aa0.7□□□□□ -2.3
SEC1YDR164C MPM1P40364 252 aa0.7□□□□□ -2.3
SEC1YDR164C CAT5P41735 233 aa0.7□□□□□ -2.3
SEC1YDR164C YFR054CP43622 192 aa0.7□□□□□ -2.3
SEC1YDR164C GCD14P46959 383 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C SFH5P47008 294 aa0.7□□□□□ -2.3
SEC1YDR164C GWT1P47026 490 aa0.7□□□□□ -2.3
SEC1YDR164C IRC18P47056 224 aa0.7□□□□□ -2.3
SEC1YDR164C YJL016WP47072 561 aa0.7□□□□□ -2.3
SEC1YDR164C HOC1P47124 396 aa0.7□□□□□ -2.3
SEC1YDR164C AIM25P47140 327 aa0.7□□□□□ -2.3
SEC1YDR164C YJR111CP47148 283 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C PAC10P48363 199 aa0.7□□□□□ -2.3
SEC1YDR164C PHB2P50085 310 aa0.7□□□□□ -2.3
SEC1YDR164C MDM34P53083 459 aa0.7□□□□□ -2.3
SEC1YDR164C RPN14P53196 417 aa0.7□□□□□ -2.3
SEC1YDR164C SWC4P53201 476 aa0.7□□□□□ -2.3
SEC1YDR164C SHY1P53266 389 aa0.7□□□□□ -2.3
SEC1YDR164C OKP1P53298 406 aa0.7□□□□□ -2.3
SEC1YDR164C YGR266WP53326 701 aa0.7□□□□□ -2.3
SEC1YDR164C YNR062CP53748 327 aa0.7□□□□□ -2.3
SEC1YDR164C PGA1P53896 198 aa0.7□□□□□ -2.3
SEC1YDR164C YLR152CP54072 576 aa0.7□□□□□ -2.3
SEC1YDR164C RPL22BP56628 122 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C MRP51Q02950 344 aa0.7□□□□□ -2.3
SEC1YDR164C YDR102CQ03864 110 aa0.7□□□□□ -2.3
SEC1YDR164C URC2Q04411 772 aa0.7□□□□□ -2.3
SEC1YDR164C RRN11Q04712 507 aa0.7□□□□□ -2.3
SEC1YDR164C RTN1Q04947 295 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C MRPL51Q06090 140 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C NEJ1Q06148 342 aa0.7□□□□□ -2.3
SEC1YDR164C GGA1Q06336 557 aa0.7□□□□□ -2.3
SEC1YDR164C CTS2Q06350 511 aa0.7□□□□□ -2.3
SEC1YDR164C VPS74Q06385 345 aa0.7□□□□□ -2.3
SEC1YDR164C YLR413WQ06689 675 aa0.7□□□□□ -2.3
SEC1YDR164C SYO1Q07395 620 aa0.7□□□□□ -2.3
SEC1YDR164C HRT1Q08273 121 aa0.7□□□□□ -2.3
SEC1YDR164C APC5Q08683 685 aa0.7□□□□□ -2.3
SEC1YDR164C RAX1Q08760 435 aa0.7□□□□□ -2.3
SEC1YDR164C SCP1Q08873 200 aa0.7□□□□□ -2.3
SEC1YDR164C SRL2Q12020 392 aa0.7□□□□□ -2.3
SEC1YDR164C TMS1Q12116 473 aa0.7□□□□□ -2.3
SEC1YDR164C YPR022CQ12139 1133 aa0.7□□□□□ -2.3
SEC1YDR164C RRP42Q12277 265 aaPredicted RBP0.7□□□□□ -2.3
SEC1YDR164C PST2Q12335 198 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C RMD5Q12508 421 aa0.7□□□□□ -2.3
SEC1YDR164C NAG1Q8TGN9 163 aa0.7□□□□□ -2.3
SEC1YDR164C MED11Q99278 115 aa0.7□□□□□ -2.3
SEC1YDR164C ODC2Q99297 307 aa0.7□□□□□ -2.3
SEC1YDR164C ACC1Q00955 2233 aaKnown RBP0.7□□□□□ -2.3
SEC1YDR164C UTP10P42945 1769 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C TEL1P38110 2787 aa0.69□□□□□ -2.3
SEC1YDR164C HHF1P02309 103 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C HIS3P06633 220 aa0.69□□□□□ -2.3
SEC1YDR164C SPT3P06844 337 aa0.69□□□□□ -2.3
SEC1YDR164C YKR104WP0CE69 306 aa0.69□□□□□ -2.3
SEC1YDR164C RPS16AP0CX51 143 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C RPS16BP0CX52 143 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C GAL3P13045 520 aa0.69□□□□□ -2.3
SEC1YDR164C CTA1P15202 515 aa0.69□□□□□ -2.3
SEC1YDR164C RPS1BP23248 255 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C MRS4P23500 304 aa0.69□□□□□ -2.3
SEC1YDR164C HXT2P23585 541 aa0.69□□□□□ -2.3
SEC1YDR164C PPH21P23594 369 aa0.69□□□□□ -2.3
SEC1YDR164C MEK1P24719 497 aaPredicted RBP0.69□□□□□ -2.3
SEC1YDR164C GIT1P25346 518 aa0.69□□□□□ -2.3
SEC1YDR164C IDH1P28834 360 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
SEC1YDR164C OAC1P32332 324 aa0.69□□□□□ -2.3
SEC1YDR164C VMA6P32366 345 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C MDH3P32419 343 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
SEC1YDR164C HYM1P32464 399 aa0.69□□□□□ -2.3
SEC1YDR164C YEF1P32622 495 aa0.69□□□□□ -2.3
SEC1YDR164C RPS1AP33442 255 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C MSN4P33749 630 aa0.69□□□□□ -2.3
SEC1YDR164C TIP20P33891 701 aa0.69□□□□□ -2.3
SEC1YDR164C ZRT3P34240 503 aa0.69□□□□□ -2.3
SEC1YDR164C TMA19P35691 167 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C ANR2P36090 516 aaPredicted RBP0.69□□□□□ -2.3
SEC1YDR164C PAN3P36102 679 aaPredicted RBP0.69□□□□□ -2.3
SEC1YDR164C CAF4P36130 643 aa0.69□□□□□ -2.3
SEC1YDR164C ECM13P38195 257 aa0.69□□□□□ -2.3
SEC1YDR164C HTD2P38790 280 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C NVJ1P38881 321 aa0.69□□□□□ -2.3
SEC1YDR164C YHB1P39676 399 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C YER079WP40052 210 aaKnown RBP0.69□□□□□ -2.3
SEC1YDR164C SHO1P40073 367 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms