RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	PRS4	P38063	326 aa	Predicted RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	FLR1	P38124	548 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	YBL029W	P38201	376 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	YBR032W	P38223	100 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	CUE1	P38428	203 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	RRP4	P38792	359 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	YPT35	P38815	214 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	YHR130C	P38834	111 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	CHS7	P38843	316 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	TIF34	P40217	347 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	AYR1	P40471	297 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	LYS12	P40495	371 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	YFR057W	P43625	151 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	BNA2	P47125	453 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	ASN1	P49089	572 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	MDM34	P53083	459 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	RRT6	P53117	311 aa	Predicted RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	LST7	P53237	242 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	YNL092W	P53934	400 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	SUR7	P54003	302 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	CAB5	Q03941	241 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	RAV2	Q03956	351 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	CTK1	Q03957	528 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	LIP2	Q06005	328 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	RXT3	Q07458	294 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	POM34	Q12445	299 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	AHA1	Q12449	350 aa	Known RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	RPL13A	Q12690	199 aa	Predicted RBP	3.55	□□□□□ -1.84
RPS13	YDR064W	RIB3	Q99258	208 aa		3.55	□□□□□ -1.84
RPS13	YDR064W	SUC2	P00724	532 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	TPK3	P05986	398 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	CDC6	P09119	513 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YER190C-B	P0CX94	160 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YEL077W-A	P0CX95	160 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YGR296C-B	P0CX96	160 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YPL283W-B	P0CX97	160 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YPR204C-A	P0CX98	160 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	SNF4	P12904	322 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	SPT15	P13393	240 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	SAM35	P14693	329 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MCK1	P21965	375 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	HYP2	P23301	157 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	ELO2	P25358	347 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	PUT3	P25502	979 aa	Predicted RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	YCL002C	P25565	263 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MGT1	P26188	188 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	BUB2	P26448	306 aa	Predicted RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	INO2	P26798	304 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	SGE1	P33335	543 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	FRE2	P36033	711 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	PMU1	P36069	295 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	PDX3	P38075	228 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	LSM2	P38203	95 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	REG2	P38232	338 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	SRP68	P38687	599 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	YHR210C	P38893	341 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	PRE6	P40303	254 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	YIL024C	P40543	189 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YPS6	P40583	537 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YJL118W	P47022	219 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	DPB11	P47027	764 aa	Predicted RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	MCM22	P47167	239 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	HXT16	P47185	567 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MIC26	P50087	233 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MUP1	P50276	574 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	IBD2	P53892	351 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	RSM23	Q01163	450 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	SEN15	Q04675	128 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MRPL35	Q06678	367 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YPL260W	Q08977	551 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	FRE8	Q12209	686 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	PST1	Q12355	444 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	NDJ1	Q12366	352 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	MHT1	Q12525	324 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	YKL033W-A	Q86ZR7	236 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	DET1	Q99288	334 aa	Known RBP	3.54	□□□□□ -1.84
RPS13	YDR064W	RIF1	P29539	1916 aa		3.54	□□□□□ -1.84
RPS13	YDR064W	FKS3	Q04952	1785 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	YLR462W	O13556	202 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	PAI3	P01094	68 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	ADE4	P04046	510 aa	Known RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	YMR31	P19955	123 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	BET2	P20133	325 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	EPT1	P22140	391 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	SYN8	P31377	255 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	DCG1	P32460	244 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	MUD1	P32605	298 aa	Known RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	RAD23	P32628	398 aa	Known RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	SFC1	P33303	322 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	REC104	P33323	182 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
RPS13	YDR064W	SRY1	P36007	326 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	THI2	P38141	450 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	MMS21	P38632	267 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	RPL14B	P38754	138 aa	Known RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	FSH1	P38777	243 aa	Known RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	MIT1	P40002	666 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	BTT1	P40314	149 aa	Predicted RBP	3.53	□□□□□ -1.84
RPS13	YDR064W	PTR3	P43606	678 aa		3.53	□□□□□ -1.84
RPS13	YDR064W	RPA43	P46669	326 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms