RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ARO4P32449 370 aaKnown RBP1.09□□□□□ -2.23
VPS54YDR027C AEP1P32493 518 aa1.09□□□□□ -2.23
VPS54YDR027C SUA5P32579 426 aa1.09□□□□□ -2.23
VPS54YDR027C HSM3P38348 480 aa1.09□□□□□ -2.23
VPS54YDR027C ECM34P38728 170 aa1.09□□□□□ -2.23
VPS54YDR027C HMF1P40037 129 aaKnown RBP1.09□□□□□ -2.23
VPS54YDR027C AVT7P40501 490 aa1.09□□□□□ -2.23
VPS54YDR027C SER33P40510 469 aa1.09□□□□□ -2.23
VPS54YDR027C TIM21P53220 239 aa1.09□□□□□ -2.23
VPS54YDR027C YML018CQ03730 393 aa1.09□□□□□ -2.23
VPS54YDR027C UTP15Q04305 513 aaKnown RBP1.09□□□□□ -2.23
VPS54YDR027C RNH1Q04740 348 aa1.09□□□□□ -2.23
VPS54YDR027C INM2Q05533 292 aa1.09□□□□□ -2.23
VPS54YDR027C ECM19Q06011 112 aa1.09□□□□□ -2.23
VPS54YDR027C SGT2Q12118 346 aaKnown RBP1.09□□□□□ -2.23
VPS54YDR027C IFM1P25038 676 aa1.09□□□□□ -2.24
VPS54YDR027C IME2P32581 645 aa1.09□□□□□ -2.24
VPS54YDR027C DDI1P40087 428 aa1.09□□□□□ -2.24
VPS54YDR027C ACT1P60010 375 aaKnown RBP1.09□□□□□ -2.24
VPS54YDR027C PET117Q02771 107 aa1.09□□□□□ -2.24
VPS54YDR027C YPL113CQ02961 396 aa1.09□□□□□ -2.24
VPS54YDR027C CWC21Q03375 135 aaKnown RBP1.09□□□□□ -2.24
VPS54YDR027C VPS60Q03390 229 aa1.09□□□□□ -2.24
VPS54YDR027C ADH6Q04894 360 aaKnown RBP1.09□□□□□ -2.24
VPS54YDR027C PIN3Q06449 215 aa1.09□□□□□ -2.24
VPS54YDR027C CTR3Q06686 241 aa1.09□□□□□ -2.24
VPS54YDR027C TRM10Q12400 293 aa1.09□□□□□ -2.24
VPS54YDR027C QCR6P00127 147 aa1.08□□□□□ -2.24
VPS54YDR027C HIS1P00498 297 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C TPI1P00942 248 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C RAD3P06839 778 aa1.08□□□□□ -2.24
VPS54YDR027C DAL81P21657 970 aa1.08□□□□□ -2.24
VPS54YDR027C NPT1P39683 429 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C SEN34P39707 275 aa1.08□□□□□ -2.24
VPS54YDR027C YER184CP39961 794 aa1.08□□□□□ -2.24
VPS54YDR027C TIF34P40217 347 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C TAD2P47058 250 aa1.08□□□□□ -2.24
VPS54YDR027C YGL118CP53132 145 aa1.08□□□□□ -2.24
VPS54YDR027C MNT4P53745 580 aa1.08□□□□□ -2.24
VPS54YDR027C SWS2P53937 143 aa1.08□□□□□ -2.24
VPS54YDR027C TAF9Q05027 157 aa1.08□□□□□ -2.24
VPS54YDR027C BOP2Q06150 570 aa1.08□□□□□ -2.24
VPS54YDR027C SDO1Q07953 250 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C ATG31Q12421 196 aa1.08□□□□□ -2.24
VPS54YDR027C RPS19AP07280 144 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C RPS19BP07281 144 aaPredicted RBP1.08□□□□□ -2.24
VPS54YDR027C TCP1P12612 559 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C RPB4P20433 221 aaPredicted RBP1.08□□□□□ -2.24
VPS54YDR027C IMP1P28627 190 aa1.08□□□□□ -2.24
VPS54YDR027C MSN4P33749 630 aa1.08□□□□□ -2.24
VPS54YDR027C TVP38P36164 337 aa1.08□□□□□ -2.24
VPS54YDR027C PRS4P38063 326 aaPredicted RBP1.08□□□□□ -2.24
VPS54YDR027C PRS2P38620 318 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C BDH1P39714 382 aa1.08□□□□□ -2.24
VPS54YDR027C FRT2P39734 528 aa1.08□□□□□ -2.24
VPS54YDR027C LIA1P47120 325 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C MAL13P53338 473 aa1.08□□□□□ -2.24
VPS54YDR027C FMP41P53889 259 aaKnown RBP1.08□□□□□ -2.24
VPS54YDR027C MRS2Q01926 470 aa1.08□□□□□ -2.24
VPS54YDR027C SRL4Q03085 281 aa1.08□□□□□ -2.24
VPS54YDR027C MSH5Q12175 901 aa1.08□□□□□ -2.24
VPS54YDR027C MED4Q12343 284 aa1.08□□□□□ -2.24
VPS54YDR027C MRP1P10662 321 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C KSS1P14681 368 aa1.07□□□□□ -2.24
VPS54YDR027C AIM29P36154 155 aa1.07□□□□□ -2.24
VPS54YDR027C MRPL3P36516 390 aa1.07□□□□□ -2.24
VPS54YDR027C YBL081WP38180 368 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C SPT8P38915 602 aa1.07□□□□□ -2.24
VPS54YDR027C UFE1P41834 346 aa1.07□□□□□ -2.24
VPS54YDR027C YJR012CP47087 207 aa1.07□□□□□ -2.24
VPS54YDR027C COQ5P49017 307 aa1.07□□□□□ -2.24
VPS54YDR027C CAX4P53223 239 aa1.07□□□□□ -2.24
VPS54YDR027C ALG11P53954 548 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C CTF19Q02732 369 aa1.07□□□□□ -2.24
VPS54YDR027C SDC1Q03323 175 aa1.07□□□□□ -2.24
VPS54YDR027C EBS1Q03466 884 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C GRX3Q03835 250 aa1.07□□□□□ -2.24
VPS54YDR027C MYO5Q04439 1219 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C YDL211CQ12121 372 aa1.07□□□□□ -2.24
VPS54YDR027C YOS9Q99220 542 aa1.07□□□□□ -2.24
VPS54YDR027C ARG80P07249 177 aa1.07□□□□□ -2.24
VPS54YDR027C MATALPHA1P0CY06 175 aa1.07□□□□□ -2.24
VPS54YDR027C HMLALPHA1P0CY07 175 aa1.07□□□□□ -2.24
VPS54YDR027C MER1P16523 270 aa1.07□□□□□ -2.24
VPS54YDR027C PEX3P28795 441 aa1.07□□□□□ -2.24
VPS54YDR027C EHD3P28817 500 aa1.07□□□□□ -2.24
VPS54YDR027C QRI5P32344 111 aa1.07□□□□□ -2.24
VPS54YDR027C MED8P38304 223 aa1.07□□□□□ -2.24
VPS54YDR027C SMB1P40018 196 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C EDC2P40023 145 aaPredicted RBP1.07□□□□□ -2.24
VPS54YDR027C KRE29P40026 464 aa1.07□□□□□ -2.24
VPS54YDR027C YFL064CP43540 174 aa1.07□□□□□ -2.24
VPS54YDR027C GLG2P47011 380 aa1.07□□□□□ -2.24
VPS54YDR027C PRP24P49960 444 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C CGR1P53188 120 aa1.07□□□□□ -2.24
VPS54YDR027C YNL247WP53852 767 aaKnown RBP1.07□□□□□ -2.24
VPS54YDR027C SEC10Q06245 871 aa1.07□□□□□ -2.24
VPS54YDR027C YPR172WQ06608 200 aa1.07□□□□□ -2.24
VPS54YDR027C SME1Q12330 94 aaPredicted RBP1.07□□□□□ -2.24
VPS54YDR027C AI5_BETAQ9ZZX0 354 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms