RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C HCH1P53834 153 aa3.65□□□□□ -1.82
CDC9YDL164C TIM44Q01852 431 aa3.65□□□□□ -1.82
CDC9YDL164C HEM25Q07534 307 aa3.65□□□□□ -1.82
CDC9YDL164C BI3Q9ZZW7 517 aa3.65□□□□□ -1.82
CDC9YDL164C SEC4P07560 215 aaKnown RBP3.65□□□□□ -1.83
CDC9YDL164C ZWF1P11412 505 aaKnown RBP3.65□□□□□ -1.83
CDC9YDL164C ERD1P16151 362 aa3.65□□□□□ -1.83
CDC9YDL164C INO2P26798 304 aa3.65□□□□□ -1.83
CDC9YDL164C TIP20P33891 701 aa3.65□□□□□ -1.83
CDC9YDL164C SLM6P38343 150 aa3.65□□□□□ -1.83
CDC9YDL164C PTI1P39927 425 aaPredicted RBP3.65□□□□□ -1.83
CDC9YDL164C OXA1P39952 402 aa3.65□□□□□ -1.83
CDC9YDL164C PAN6P40459 309 aa3.65□□□□□ -1.83
CDC9YDL164C YIA6P40556 373 aa3.65□□□□□ -1.83
CDC9YDL164C YNL320WP42840 284 aa3.65□□□□□ -1.83
CDC9YDL164C YJR054WP47114 497 aa3.65□□□□□ -1.83
CDC9YDL164C MOG1P47123 218 aa3.65□□□□□ -1.83
CDC9YDL164C VPS25P47142 202 aa3.65□□□□□ -1.83
CDC9YDL164C VMA10P48836 114 aaKnown RBP3.65□□□□□ -1.83
CDC9YDL164C YNL234WP53857 426 aa3.65□□□□□ -1.83
CDC9YDL164C FMP41P53889 259 aaKnown RBP3.65□□□□□ -1.83
CDC9YDL164C IBD2P53892 351 aa3.65□□□□□ -1.83
CDC9YDL164C YET3Q07451 203 aa3.65□□□□□ -1.83
CDC9YDL164C YOR292CQ08743 309 aa3.65□□□□□ -1.83
CDC9YDL164C RAX2Q12465 1220 aa3.65□□□□□ -1.83
CDC9YDL164C YBT1P32386 1661 aa3.64□□□□□ -1.83
CDC9YDL164C ARO1P08566 1588 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C RPO31P04051 1460 aa3.64□□□□□ -1.83
CDC9YDL164C RPL4AP10664 362 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C WSC4P38739 605 aa3.64□□□□□ -1.83
CDC9YDL164C BDH1P39714 382 aa3.64□□□□□ -1.83
CDC9YDL164C RPL4BP49626 362 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C SPG4Q04438 115 aa3.64□□□□□ -1.83
CDC9YDL164C COX5AP00424 153 aa3.64□□□□□ -1.83
CDC9YDL164C YKR104WP0CE69 306 aa3.64□□□□□ -1.83
CDC9YDL164C MRPL20P22354 195 aaPredicted RBP3.64□□□□□ -1.83
CDC9YDL164C CDC50P25656 391 aa3.64□□□□□ -1.83
CDC9YDL164C UPS2P35200 230 aa3.64□□□□□ -1.83
CDC9YDL164C SOL2P37262 315 aa3.64□□□□□ -1.83
CDC9YDL164C MTC4P38335 694 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C FLO5P38894 1075 aa3.64□□□□□ -1.83
CDC9YDL164C GIM4P40005 111 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C YFH7P43591 353 aa3.64□□□□□ -1.83
CDC9YDL164C YJR085CP47131 105 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C YGR042WP53227 271 aa3.64□□□□□ -1.83
CDC9YDL164C HCR1Q05775 265 aaKnown RBP3.64□□□□□ -1.83
CDC9YDL164C SNU23Q12368 194 aaPredicted RBP3.64□□□□□ -1.83
CDC9YDL164C TY1B-DR3Q99231 1755 aa3.64□□□□□ -1.83
CDC9YDL164C DNF2Q12675 1612 aa3.63□□□□□ -1.83
CDC9YDL164C VPH2P32341 215 aa3.63□□□□□ -1.83
CDC9YDL164C YHR127WP38833 243 aaKnown RBP3.63□□□□□ -1.83
CDC9YDL164C SHC1P39000 512 aa3.63□□□□□ -1.83
CDC9YDL164C PEX17P40155 199 aa3.63□□□□□ -1.83
CDC9YDL164C RPR2P40571 144 aa3.63□□□□□ -1.83
CDC9YDL164C AZF1P41696 914 aa3.63□□□□□ -1.83
CDC9YDL164C PRM8P53174 237 aa3.63□□□□□ -1.83
CDC9YDL164C TAF9Q05027 157 aa3.63□□□□□ -1.83
CDC9YDL164C YPR091CQ06833 770 aa3.63□□□□□ -1.83
CDC9YDL164C RFU1Q08003 200 aa3.63□□□□□ -1.83
CDC9YDL164C AYT1Q12226 474 aa3.63□□□□□ -1.83
CDC9YDL164C FRM2P37261 193 aa3.63□□□□□ -1.83
CDC9YDL164C SSH1P38353 490 aaKnown RBP3.63□□□□□ -1.83
CDC9YDL164C AVT7P40501 490 aa3.63□□□□□ -1.83
CDC9YDL164C BNS1P50084 137 aa3.63□□□□□ -1.83
CDC9YDL164C GTR2P53290 341 aa3.63□□□□□ -1.83
CDC9YDL164C FYV6P53913 173 aa3.63□□□□□ -1.83
CDC9YDL164C COG5P53951 403 aa3.63□□□□□ -1.83
CDC9YDL164C YOL019WQ08157 551 aa3.63□□□□□ -1.83
CDC9YDL164C RRP42Q12277 265 aaPredicted RBP3.63□□□□□ -1.83
CDC9YDL164C TRM10Q12400 293 aa3.63□□□□□ -1.83
CDC9YDL164C MET5P47169 1442 aa3.63□□□□□ -1.83
CDC9YDL164C ATG2P53855 1592 aa3.62□□□□□ -1.83
CDC9YDL164C TAH1P25638 111 aaPredicted RBP3.62□□□□□ -1.83
CDC9YDL164C ARC40P38328 384 aaKnown RBP3.62□□□□□ -1.83
CDC9YDL164C ECM14P38836 430 aa3.62□□□□□ -1.83
CDC9YDL164C EGT2P42835 1041 aa3.62□□□□□ -1.83
CDC9YDL164C RHO3Q00245 231 aaKnown RBP3.62□□□□□ -1.83
CDC9YDL164C YML018CQ03730 393 aa3.62□□□□□ -1.83
CDC9YDL164C YOR186WQ08560 144 aa3.62□□□□□ -1.83
CDC9YDL164C RPS28BP0C0X0 67 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C MGT1P26188 188 aa3.61□□□□□ -1.83
CDC9YDL164C ALK2P32789 676 aaPredicted RBP3.61□□□□□ -1.83
CDC9YDL164C KTI12P34253 313 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C OAR1P35731 278 aa3.61□□□□□ -1.83
CDC9YDL164C ANR2P36090 516 aaPredicted RBP3.61□□□□□ -1.83
CDC9YDL164C YER137CP40083 148 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C XBP1P40489 647 aa3.61□□□□□ -1.83
CDC9YDL164C IRC24P40580 263 aa3.61□□□□□ -1.83
CDC9YDL164C MPA43P53583 542 aaPredicted RBP3.61□□□□□ -1.83
CDC9YDL164C ABF2Q02486 183 aa3.61□□□□□ -1.83
CDC9YDL164C SML1Q04964 104 aa3.61□□□□□ -1.83
CDC9YDL164C YOL024WQ08172 172 aa3.61□□□□□ -1.83
CDC9YDL164C THP3Q12049 470 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C ATP16Q12165 160 aa3.61□□□□□ -1.83
CDC9YDL164C RPS28AQ3E7X9 67 aaPredicted RBP3.61□□□□□ -1.83
CDC9YDL164C RIB3Q99258 208 aa3.61□□□□□ -1.83
CDC9YDL164C RAD50P12753 1312 aa3.61□□□□□ -1.83
CDC9YDL164C ROM2P51862 1356 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C STE7P06784 515 aa3.61□□□□□ -1.83
CDC9YDL164C RPS18AP0CX55 146 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms