RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W VMA5P31412 392 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W HOG1P32485 435 aa6.27□□□□□ -1.41
NUP84YDL116W SHM2P37291 469 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W LYS1P38998 373 aaRIP-Chip data6.27□□□□□ -1.41not detected
NUP84YDL116W TOK1P40310 691 aa6.27□□□□□ -1.41
NUP84YDL116W GNA1P43577 159 aaPredicted RBP6.27□□□□□ -1.41
NUP84YDL116W ASK10P48361 1146 aa6.27□□□□□ -1.41
NUP84YDL116W YML018CQ03730 393 aa6.27□□□□□ -1.41
NUP84YDL116W SNT309Q06091 175 aaPredicted RBP6.27□□□□□ -1.41
NUP84YDL116W XYL2Q07993 356 aa6.27□□□□□ -1.41
NUP84YDL116W YOR015WQ12169 119 aa6.27□□□□□ -1.41
NUP84YDL116W PRM4Q12498 284 aa6.27□□□□□ -1.41
NUP84YDL116W PET18P25362 215 aa6.26□□□□□ -1.41
NUP84YDL116W DCG1P32460 244 aa6.26□□□□□ -1.41
NUP84YDL116W RML2P32611 393 aa6.26□□□□□ -1.41
NUP84YDL116W SPT10P35208 640 aa6.26□□□□□ -1.41
NUP84YDL116W FMP46P36141 133 aaKnown RBP6.26□□□□□ -1.41
NUP84YDL116W ATF1P40353 525 aa6.26□□□□□ -1.41
NUP84YDL116W AVT4P50944 713 aa6.26□□□□□ -1.41
NUP84YDL116W PNC1P53184 216 aaKnown RBP6.26□□□□□ -1.41
NUP84YDL116W FYV6P53913 173 aa6.26□□□□□ -1.41
NUP84YDL116W PET191Q02772 108 aa6.26□□□□□ -1.41
NUP84YDL116W YDR248CQ03786 193 aa6.26□□□□□ -1.41
NUP84YDL116W YMR253CQ04835 414 aa6.26□□□□□ -1.41
NUP84YDL116W PRS5Q12265 496 aaKnown RBP6.26□□□□□ -1.41
NUP84YDL116W URA6P15700 204 aa6.25□□□□□ -1.41
NUP84YDL116W PRO1P32264 428 aa6.25□□□□□ -1.41
NUP84YDL116W SSS1P35179 80 aa6.25□□□□□ -1.41
NUP84YDL116W VPS51P36116 164 aa6.25□□□□□ -1.41
NUP84YDL116W PRS2P38620 318 aaKnown RBP6.25□□□□□ -1.41
NUP84YDL116W MNL1P38888 796 aa6.25□□□□□ -1.41
NUP84YDL116W DAN1P47178 298 aa6.25□□□□□ -1.41
NUP84YDL116W ALG9P53868 555 aaKnown RBP6.25□□□□□ -1.41
NUP84YDL116W EGD1Q02642 157 aaKnown RBP6.25□□□□□ -1.41
NUP84YDL116W YPR127WQ06494 345 aa6.25□□□□□ -1.41
NUP84YDL116W ADE8P04161 214 aa6.25□□□□□ -1.41
NUP84YDL116W COX9P07255 59 aa6.25□□□□□ -1.41
NUP84YDL116W FMT1P32785 401 aa6.25□□□□□ -1.41
NUP84YDL116W MRPL37P36532 105 aa6.25□□□□□ -1.41
NUP84YDL116W YIL067CP40514 678 aa6.25□□□□□ -1.41
NUP84YDL116W LSM8P47093 109 aaKnown RBP6.25□□□□□ -1.41
NUP84YDL116W PKP2P53170 491 aa6.25□□□□□ -1.41
NUP84YDL116W MRX8Q05473 314 aa6.25□□□□□ -1.41
NUP84YDL116W ZEO1Q08245 113 aa6.25□□□□□ -1.41
NUP84YDL116W TDH1P00360 332 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W OPI3P05375 206 aa6.24□□□□□ -1.41
NUP84YDL116W GLK1P17709 500 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W ARO4P32449 370 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W MRPL27P36526 146 aaPredicted RBP6.24□□□□□ -1.41
NUP84YDL116W RIB5P38145 238 aa6.24□□□□□ -1.41
NUP84YDL116W SSH1P38353 490 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W FLO5P38894 1075 aa6.24□□□□□ -1.41
NUP84YDL116W SOL1P50278 321 aa6.24□□□□□ -1.41
NUP84YDL116W PEF1P53238 335 aa6.24□□□□□ -1.41
NUP84YDL116W YGR250CP53316 781 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W HAS1Q03532 505 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W YOR385WQ08909 290 aa6.24□□□□□ -1.41
NUP84YDL116W SCL1P21243 252 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W PAD1P33751 242 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
NUP84YDL116W IMD2P38697 523 aaKnown RBP6.24□□□□□ -1.41
NUP84YDL116W YER158CP40095 573 aa6.24□□□□□ -1.41
NUP84YDL116W SLM1P40485 686 aa6.24□□□□□ -1.41
NUP84YDL116W AVT7P40501 490 aa6.24□□□□□ -1.41
NUP84YDL116W BUD8P41698 603 aa6.24□□□□□ -1.41
NUP84YDL116W YGL204CP53089 101 aa6.24□□□□□ -1.41
NUP84YDL116W YGR012WP53206 393 aa6.24□□□□□ -1.41
NUP84YDL116W MPA43P53583 542 aaPredicted RBP6.24□□□□□ -1.41
NUP84YDL116W TPP1Q03796 238 aa6.24□□□□□ -1.41
NUP84YDL116W YDR415CQ04033 374 aaPredicted RBP6.24□□□□□ -1.41
NUP84YDL116W LUC7Q07508 261 aaPredicted RBP6.24□□□□□ -1.41
NUP84YDL116W SRL2Q12020 392 aa6.24□□□□□ -1.41
NUP84YDL116W QCR7P00128 127 aa6.23□□□□□ -1.41
NUP84YDL116W RIP1P08067 215 aa6.23□□□□□ -1.41
NUP84YDL116W KRR1P25586 316 aaPredicted RBP6.23□□□□□ -1.41
NUP84YDL116W TRS65P32893 560 aa6.23□□□□□ -1.41
NUP84YDL116W REC104P33323 182 aa6.23□□□□□ -1.41
NUP84YDL116W TRR2P38816 342 aa6.23□□□□□ -1.41
NUP84YDL116W SEN34P39707 275 aa6.23□□□□□ -1.41
NUP84YDL116W ADO1P47143 340 aaKnown RBP6.23□□□□□ -1.41
NUP84YDL116W OCA1P50946 238 aaPredicted RBP6.23□□□□□ -1.41
NUP84YDL116W YGL235WP53071 178 aa6.23□□□□□ -1.41
NUP84YDL116W GPI15P53961 229 aa6.23□□□□□ -1.41
NUP84YDL116W MOT3P54785 490 aaKnown RBP6.23□□□□□ -1.41
NUP84YDL116W PET20Q99373 253 aa6.23□□□□□ -1.41
NUP84YDL116W OLE1P21147 510 aaKnown RBP6.23□□□□□ -1.41
NUP84YDL116W YGL114WP53134 725 aa6.23□□□□□ -1.41
NUP84YDL116W YGR066CP53242 292 aa6.23□□□□□ -1.41
NUP84YDL116W AAH1P53909 347 aa6.23□□□□□ -1.41
NUP84YDL116W ACT1P60010 375 aaKnown RBP6.23□□□□□ -1.41
NUP84YDL116W ACS1Q01574 713 aa6.23□□□□□ -1.41
NUP84YDL116W CAB5Q03941 241 aa6.23□□□□□ -1.41
NUP84YDL116W SRO7Q12038 1033 aa6.23□□□□□ -1.41
NUP84YDL116W SLC1P33333 303 aa6.22□□□□□ -1.41
NUP84YDL116W SDH4P37298 181 aa6.22□□□□□ -1.41
NUP84YDL116W HOL1P53389 586 aa6.22□□□□□ -1.41
NUP84YDL116W SEC13Q04491 297 aaKnown RBP6.22□□□□□ -1.41
NUP84YDL116W ACP1P32463 125 aa6.21□□□□□ -1.41
NUP84YDL116W SNC2P33328 115 aa6.21□□□□□ -1.41
NUP84YDL116W RPL14AP36105 138 aaKnown RBP6.21□□□□□ -1.41
NUP84YDL116W UMP1P38293 148 aa6.21□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms