RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
PIM1	YBL022C	DPM1	P14020	267 aa	Known RBP	3.67	□□□□□ -1.82
PIM1	YBL022C	SCO1	P23833	295 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	ERG4	P25340	473 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	YCR025C	P25352	136 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	GLN1	P32288	370 aa	Known RBP	3.67	□□□□□ -1.82
PIM1	YBL022C	YKU70	P32807	602 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	VAC8	P39968	578 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	SPO74	P45819	413 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	YMR321C	Q04898	105 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	NUT2	Q06213	157 aa		3.67	□□□□□ -1.82
PIM1	YBL022C	ACK1	Q07622	623 aa	Predicted RBP	3.67	□□□□□ -1.82
PIM1	YBL022C	APE1	P14904	514 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YKL187C	P34231	750 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	VID24	P38263	362 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	AXL2	P38928	823 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	AMA1	P50082	593 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	SLX9	P53251	210 aa	Predicted RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	YNR021W	P53723	404 aa	Known RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	DIG2	Q03373	323 aa	Known RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	PEX30	Q06169	523 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YOR338W	Q99326	363 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	RIP1	P08067	215 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YER190C-B	P0CX94	160 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YEL077W-A	P0CX95	160 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YGR296C-B	P0CX96	160 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YPL283W-B	P0CX97	160 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YPR204C-A	P0CX98	160 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	GLN3	P18494	730 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	NUP1	P20676	1076 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YBR197C	P38306	217 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	PAU5	P43575	122 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	ATG27	P46989	271 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YGL204C	P53089	101 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YGR042W	P53227	271 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	BUD25	P85052	153 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	TMA23	Q03525	211 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	TDA6	Q06466	467 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YLR036C	Q07986	203 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	PRR2	Q12310	699 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	HAA1	Q12753	694 aa	Known RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	NFS1	P25374	497 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	TIP1	P27654	210 aa	Predicted RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	YBL028C	P38202	106 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	PRM5	P40476	318 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	GTS1	P40956	396 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	BUD8	P41698	603 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	ACF4	P47129	309 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	YGR015C	P53208	328 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	MTM1	P53320	366 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	CCE1	Q03702	353 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	DPB4	Q04603	196 aa	Known RBP	3.66	□□□□□ -1.82
PIM1	YBL022C	SHS1	Q07657	551 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	ERV2	Q12284	196 aa		3.66	□□□□□ -1.82
PIM1	YBL022C	COX3	P00420	269 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	OLE1	P21147	510 aa	Known RBP	3.65	□□□□□ -1.82
PIM1	YBL022C	DCW1	P36091	449 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	FIG1	P38224	298 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	SHE3	P38272	425 aa	Known RBP	3.65	□□□□□ -1.82
PIM1	YBL022C	WSS1	P38838	269 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	YJL007C	P47080	104 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	YGL235W	P53071	178 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	YIP4	P53093	235 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	YLR455W	Q06188	304 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	YLR456W	Q06199	204 aa		3.65	□□□□□ -1.82
PIM1	YBL022C	SFP1	P32432	683 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.65	□□□□□ -1.83	not detected
PIM1	YBL022C	PMU1	P36069	295 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	TIM17	P39515	158 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	SMB1	P40018	196 aa	Known RBP	3.65	□□□□□ -1.83
PIM1	YBL022C	PUG1	P40100	303 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	YJL028W	P47062	111 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	FLC3	P53121	802 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	SCW10	Q04951	389 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	HRI1	Q05905	244 aa	Known RBP	3.65	□□□□□ -1.83
PIM1	YBL022C	YCL012C	Q8J0M4	134 aa		3.65	□□□□□ -1.83
PIM1	YBL022C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
PIM1	YBL022C	HMT1	P38074	348 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	TRS20	P38334	175 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	TRR2	P38816	342 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	PSD1	P39006	500 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	BDH1	P39714	382 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	YNL195C	P40168	261 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	NSA1	P53136	463 aa	Predicted RBP	3.64	□□□□□ -1.83
PIM1	YBL022C	ACT1	P60010	375 aa	Known RBP	3.64	□□□□□ -1.83
PIM1	YBL022C	YPL067C	Q02754	198 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	TPO4	Q12256	659 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	YLR358C	O13565	187 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	RPP2A	P05319	106 aa	Known RBP	3.64	□□□□□ -1.83
PIM1	YBL022C	MIH1	P23748	554 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	FMC1	P40491	155 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	TAF4	P50105	388 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	EMC4	P53073	190 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	EKI1	Q03764	534 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	YML083C	Q04526	418 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	YLR346C	Q06139	101 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	YLR030W	Q07967	263 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	SOD2	P00447	233 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	STF1	P01098	86 aa		3.64	□□□□□ -1.83
PIM1	YBL022C	SCH9	P11792	824 aa	Known RBP	3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms