RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 NOP13P53883 403 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
NME1NME1 EMI1Q04406 187 aa5.75□□□□□ -1.49
NME1NME1 FAB1P34756 2278 aa5.74□□□□□ -1.49
NME1NME1 HIS3P06633 220 aa5.74□□□□□ -1.49
NME1NME1 RPO26P20435 155 aa5.74□□□□□ -1.49
NME1NME1 YHB1P39676 399 aaKnown RBP5.74□□□□□ -1.49
NME1NME1 GCN20P43535 752 aaKnown RBP5.74□□□□□ -1.49
NME1NME1 RLP24Q07915 199 aaKnown RBP5.74□□□□□ -1.49
NME1NME1 SYC1Q08553 188 aaPredicted RBP5.74□□□□□ -1.49
NME1NME1 YPL247CQ12523 523 aa5.74□□□□□ -1.49
NME1NME1 RNP1P32385 249 aa5.73□□□□□ -1.49
NME1NME1 DRE2P36152 348 aa5.73□□□□□ -1.49
NME1NME1 YHR127WP38833 243 aaKnown RBP5.73□□□□□ -1.49
NME1NME1 FCF1Q05498 189 aaPredicted RBP5.73□□□□□ -1.49
NME1NME1 YPR011CQ12251 326 aa5.73□□□□□ -1.49
NME1NME1 MET2P08465 486 aa5.72□□□□□ -1.49
NME1NME1 TOM40P23644 387 aaKnown RBP5.72□□□□□ -1.49
NME1NME1 SPO77Q06134 477 aa5.72□□□□□ -1.49
NME1NME1 RPL24BP24000 155 aaKnown RBP5.71□□□□□ -1.5
NME1NME1 ECM13P38195 257 aa5.71□□□□□ -1.5
NME1NME1 CUE1P38428 203 aa5.71□□□□□ -1.5
NME1NME1 OTU1P43558 301 aa5.71□□□□□ -1.5
NME1NME1 YCR102CP25608 368 aa5.7□□□□□ -1.5
NME1NME1 PPA2P28239 310 aa5.69□□□□□ -1.5
NME1NME1 GDH2P33327 1092 aaKnown RBP5.69□□□□□ -1.5
NME1NME1 YKL075CP36083 450 aa5.69□□□□□ -1.5
NME1NME1 SPO73P40031 143 aa5.69□□□□□ -1.5
NME1NME1 RPC17P47076 161 aa5.69□□□□□ -1.5
NME1NME1 YGL034CP53186 121 aa5.69□□□□□ -1.5
NME1NME1 FEX1Q08913 375 aa5.69□□□□□ -1.5
NME1NME1 FEX2Q08991 375 aa5.69□□□□□ -1.5
NME1NME1 PPH21P23594 369 aa5.68□□□□□ -1.5
NME1NME1 VPS21P36017 210 aaKnown RBP5.68□□□□□ -1.5
NME1NME1 MSS2P40990 351 aa5.68□□□□□ -1.5
NME1NME1 MDM34P53083 459 aa5.68□□□□□ -1.5
NME1NME1 YGL088WP53151 121 aa5.68□□□□□ -1.5
NME1NME1 YLR126CQ12288 251 aa5.68□□□□□ -1.5
NME1NME1 NOT5Q12514 560 aaPredicted RBP5.68□□□□□ -1.5
NME1NME1 YPR096CO13587 100 aa5.67□□□□□ -1.5
NME1NME1 RHO1P06780 209 aaKnown RBP5.67□□□□□ -1.5
NME1NME1 RAD10P06838 210 aa5.67□□□□□ -1.5
NME1NME1 NTG1P31378 399 aa5.67□□□□□ -1.5
NME1NME1 YOR186WQ08560 144 aa5.67□□□□□ -1.5
NME1NME1 RSA4P25382 515 aaKnown RBP5.66□□□□□ -1.5
NME1NME1 COX15P40086 486 aa5.66□□□□□ -1.5
NME1NME1 SEI1Q06058 285 aa5.66□□□□□ -1.5
NME1NME1 GEP5Q12393 293 aa5.66□□□□□ -1.5
NME1NME1 AGC1Q12482 902 aa5.66□□□□□ -1.5
NME1NME1 KRE1P17260 313 aa5.65□□□□□ -1.5
NME1NME1 VMA6P32366 345 aaKnown RBP5.65□□□□□ -1.5
NME1NME1 YER084WP40057 128 aa5.65□□□□□ -1.5
NME1NME1 MIG1P27705 504 aa5.64□□□□□ -1.51
NME1NME1 YMR144WP40214 342 aaKnown RBP5.64□□□□□ -1.51
NME1NME1 YJL144WP47009 104 aa5.64□□□□□ -1.51
NME1NME1 APJ1P53940 528 aa5.64□□□□□ -1.51
NME1NME1 CWC21Q03375 135 aaKnown RBP5.64□□□□□ -1.51
NME1NME1 YLR179CQ06252 201 aaKnown RBP5.64□□□□□ -1.51
NME1NME1 EMP46Q12396 444 aa5.64□□□□□ -1.51
NME1NME1 SWI1P09547 1314 aa5.64□□□□□ -1.51
NME1NME1 SEC22P22214 214 aa5.63□□□□□ -1.51
NME1NME1 YER189WP40104 122 aa5.63□□□□□ -1.51
NME1NME1 DCR2Q05924 578 aa5.63□□□□□ -1.51
NME1NME1 NHP6BP11633 99 aaKnown RBP5.62□□□□□ -1.51
NME1NME1 YJR141WP47172 347 aaPredicted RBP5.62□□□□□ -1.51
NME1NME1 SYF2P53277 215 aaPredicted RBP5.62□□□□□ -1.51
NME1NME1 YMR114CQ04471 368 aaKnown RBP5.62□□□□□ -1.51
NME1NME1 THP2O13539 261 aaKnown RBP5.61□□□□□ -1.51
NME1NME1 MIC12P38341 106 aa5.61□□□□□ -1.51
NME1NME1 YNL046WP53956 172 aa5.61□□□□□ -1.51
NME1NME1 CDC10P25342 322 aaKnown RBP5.6□□□□□ -1.51
NME1NME1 PIR5P46999 287 aa5.6□□□□□ -1.51
NME1NME1 PBN1P25580 416 aa5.59□□□□□ -1.51
NME1NME1 SDH4P37298 181 aa5.59□□□□□ -1.51
NME1NME1 PRE6P40303 254 aaKnown RBP5.59□□□□□ -1.51
NME1NME1 PGA2P53903 129 aa5.59□□□□□ -1.51
NME1NME1 RPB4P20433 221 aaPredicted RBP5.58□□□□□ -1.52
NME1NME1 GON7P46984 123 aa5.58□□□□□ -1.52
NME1NME1 YOR268CQ08734 132 aa5.58□□□□□ -1.52
NME1NME1 SSO1P32867 290 aa5.57□□□□□ -1.52
NME1NME1 YKR032WP36127 104 aa5.57□□□□□ -1.52
NME1NME1 YGP1P38616 354 aaKnown RBP5.57□□□□□ -1.52
NME1NME1 TRM9P49957 279 aa5.57□□□□□ -1.52
NME1NME1 SEY1Q99287 776 aa5.57□□□□□ -1.52
NME1NME1 YLR462WO13556 202 aa5.56□□□□□ -1.52
NME1NME1 ARG80P07249 177 aa5.56□□□□□ -1.52
NME1NME1 SNA3P14359 133 aa5.56□□□□□ -1.52
NME1NME1 YMR31P19955 123 aa5.56□□□□□ -1.52
NME1NME1 NTF2P33331 125 aaKnown RBP5.56□□□□□ -1.52
NME1NME1 RCN1P36054 211 aa5.56□□□□□ -1.52
NME1NME1 YEL075CP39972 122 aa5.56□□□□□ -1.52
NME1NME1 MCM22P47167 239 aa5.56□□□□□ -1.52
NME1NME1 BBP1Q12365 385 aa5.56□□□□□ -1.52
NME1NME1 BCY1P07278 416 aaKnown RBP5.55□□□□□ -1.52
NME1NME1 ERD2P18414 219 aa5.55□□□□□ -1.52
NME1NME1 COQ1P18900 473 aa5.55□□□□□ -1.52
NME1NME1 DOA4P32571 926 aa5.55□□□□□ -1.52
NME1NME1 YRB1P41920 201 aaKnown RBP5.55□□□□□ -1.52
NME1NME1 NSA1P53136 463 aaPredicted RBP5.55□□□□□ -1.52
NME1NME1 IPP1P00817 287 aaKnown RBP5.54□□□□□ -1.52
NME1NME1 SGA1P08019 549 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms