RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 SNX27Q96L92 541 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 HAPLN2Q9GZV7 340 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 CD320Q9NPF0 282 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 TBC1D7Q9P0N9 293 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 TBX20Q9UMR3 447 aa13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-219ENST00000581250 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 TISP43B9A030 160 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 CLDN3O15551 220 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 CUTAO60888 179 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 TADA2AO75478 443 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 IDEP14735 1019 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 ME1P48163 572 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 SOX4Q06945 474 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 COASYQ13057 564 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 KCNC3Q14003 757 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 ZPBP2Q6X784 338 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 KCNG4Q8TDN1 519 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 DHX58Q96C10 678 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 DNAJC19Q96DA6 116 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 MRPL17Q9NRX2 175 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 TOPORSQ9NS56 1045 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 TCHHQ07283 1943 aa13.01□□□□□ -0.33
PPP4R1-219ENST00000581250 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■■■ 34.5
PPP4R1-219ENST00000581250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 SMIM28A0A1B0GU29 152 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 BRD1O95696 1058 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 WEE2P0C1S8 567 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 CXCL8P10145 99 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 MYBP10242 640 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 IGFBP6P24592 240 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 KLRC2P26717 231 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 TNFSF9P41273 254 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 ZP2Q05996 745 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 MCL1Q07820 350 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 ZBTB41Q5SVQ8 909 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 RARS2Q5T160 578 aaKnown RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 KANK3Q6NY19 840 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 RNF168Q8IYW5 571 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 TMEM130Q8N3G9 435 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 RIN2Q8WYP3 895 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 CASP10Q92851 521 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 ZMAT2Q96NC0 199 aaKnown RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 KLHL5Q96PQ7 755 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 EMILIN2Q9BXX0 1053 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
PPP4R1-219ENST00000581250 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 IRAK3Q9Y616 596 aa13□□□□□ -0.33
PPP4R1-219ENST00000581250 TEX28O15482 410 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 EFEMP2O95967 443 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 RPL17P18621 184 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 CLCNKBP51801 687 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 SPAG1Q07617 926 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 E2F4Q16254 413 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 TPRNQ4KMQ1 711 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 FAM171A1Q5VUB5 890 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 PRSS55Q6UWB4 352 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 TMEM184AQ6ZMB5 413 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 CEP57Q86XR8 500 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 MAP4K3Q8IVH8 894 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.333e-7■□□□□ 9.6
PPP4R1-219ENST00000581250 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 CNTN3Q9P232 1028 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 PCDHA7Q9UN72 937 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 ANK1P16157 1881 aa12.99□□□□□ -0.33
PPP4R1-219ENST00000581250 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
PPP4R1-219ENST00000581250 I3L4J1 428 aa12.98□□□□□ -0.33
PPP4R1-219ENST00000581250 LILRB3O75022 631 aa12.98□□□□□ -0.33
PPP4R1-219ENST00000581250 B3GAT3O94766 335 aa12.98□□□□□ -0.33
PPP4R1-219ENST00000581250 GCNT3O95395 438 aa12.98□□□□□ -0.33
PPP4R1-219ENST00000581250 PIGRP01833 764 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms