RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 URODP06132 367 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 CNPP09543 421 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 GLUD2P49448 558 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 YARSP54577 528 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 GTF2BQ00403 316 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 PKP1Q13835 747 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 USP41Q3LFD5 358 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 LLGL2Q6P1M3 1020 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 DNAJC19Q96DA6 116 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 ACAP3Q96P50 834 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 POP1Q99575 1024 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 TCHPQ9BT92 498 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 TBX20Q9UMR3 447 aa18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 VWA8A3KMH1 1905 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 PLXNA3P51805 1871 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 CLDN3O15551 220 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 TBCAO75347 108 aaKnown RBP18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 KCNE1P15382 129 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 CLCN4P51793 760 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 ITIH3Q06033 890 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 TPRNQ4KMQ1 711 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 ZBTB33Q86T24 672 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 DDX12PQ92771 950 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 SNX27Q96L92 541 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 UROC1Q96N76 676 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 HAPLN2Q9GZV7 340 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 DZANK1Q9NVP4 752 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 CNTN3Q9P232 1028 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 SEL1LQ9UBV2 794 aa18.82■□□□□ 0.6
SFSWAP-205ENST00000537164 SF3B1O75533 1304 aaKnown RBP eCLIP18.81■□□□□ 0.63e-15■■■■■ 344.6
SFSWAP-205ENST00000537164 CASTOR2A6NHX0 329 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 MYMKA6NI61 221 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 K7ENM7 598 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 MEFVO15553 781 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 CUTAO60888 179 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 TADA2AO75478 443 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 KIF4AO95239 1232 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 EPCAMP16422 314 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 CA8P35219 290 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 UPP1Q16831 310 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 MAP4K3Q8IVH8 894 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 TMEM87AQ8NBN3 555 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 STRA6Q9BX79 667 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 ADAM7Q9H2U9 754 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 SLC38A7Q9NVC3 462 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 FNIP2Q9P278 1114 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 CACNG4Q9UBN1 327 aa18.81■□□□□ 0.6
SFSWAP-205ENST00000537164 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 TEX28O15482 410 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 FAM189A1O60320 539 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 PPP1R37O75864 691 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 STAT6P42226 847 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 OSTNP61366 133 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 CBX2Q14781 532 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 E2F4Q16254 413 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 SLC10A6Q3KNW5 377 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 GLRA4Q5JXX5 417 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 DCLRE1AQ6PJP8 1040 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 DYMQ7RTS9 669 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 KCNG4Q8TDN1 519 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 KHSRPQ92945 711 aaKnown RBP eCLIP18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 PHF7Q9BWX1 381 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
SFSWAP-205ENST00000537164 LOC730098B7Z3J9 87 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 PI4K2BG5E9Z4 385 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 HNRNPDLO14979 420 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 PAPLNO95428 1278 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 ADH1AP07327 375 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 ADRB2P07550 413 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 GAP43P17677 238 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 KLRC2P26717 231 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 NMT1P30419 496 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 LIG4P49917 911 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 CLCNKBP51801 687 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 CREMQ03060 361 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 SOX4Q06945 474 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 KYAT1Q16773 422 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 FOXD4L5Q5VV16 416 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 KIAA1841Q6NSI8 718 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 SHC4Q6S5L8 630 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 FOXD4L4Q8WXT5 416 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 HVCN1Q96D96 273 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 BICD1Q96G01 975 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 CUEDC2Q9H467 287 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 PLEKHA5Q9HAU0 1116 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 CFAP45Q9UL16 551 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms