RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NETO1Q8TDF5 533 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
CHMP3-203ENST00000409225 FAM126AQ9BYI3 521 aaPredicted RBP18.52■□□□□ 0.56
CHMP3-203ENST00000409225 KCNMB3Q9NPA1 279 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
CHMP3-203ENST00000409225 MRPS23Q9Y3D9 190 aaKnown RBP18.52■□□□□ 0.56
CHMP3-203ENST00000409225 CHD8Q9HCK8 2581 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 ECI2O75521 394 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 CYP4A11Q02928 519 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 SSRP1Q08945 709 aaKnown RBP18.51■□□□□ 0.55
CHMP3-203ENST00000409225 LAIR1Q6GTX8 287 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 PRR23BQ6ZRT6 265 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 IFNLR1Q8IU57 520 aaPredicted RBP18.51■□□□□ 0.55
CHMP3-203ENST00000409225 TRIM22Q8IYM9 498 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 DAGLBQ8NCG7 672 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 FAM20AQ96MK3 541 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 ARID2Q68CP9 1835 aa18.51■□□□□ 0.55
CHMP3-203ENST00000409225 NOTCH4Q99466 2003 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.5■□□□□ 0.55
CHMP3-203ENST00000409225 SHISA7A6NL88 538 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 SLC30A4O14863 429 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 MARCH6O60337 910 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 POU2F2P09086 479 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 TDGF1P13385 188 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
CHMP3-203ENST00000409225 OR1D2P34982 312 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 NRLP54845 237 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
CHMP3-203ENST00000409225 POU5F1BQ06416 359 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 NPY5RQ15761 445 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 TANGO2Q6ICL3 276 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 KRT25Q7Z3Z0 450 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 ZSWIM4Q9H7M6 989 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 CACNA1GO43497 2377 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 ZMYM2Q9UBW7 1377 aa18.5■□□□□ 0.55
CHMP3-203ENST00000409225 RPS6KB1P23443 525 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 RAB33AQ14088 237 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 GRM2Q14416 872 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 SLC5A9Q2M3M2 681 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 TPH2Q8IWU9 490 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 HAS1Q92839 578 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 AIFM3Q96NN9 605 aa18.49■□□□□ 0.55
CHMP3-203ENST00000409225 USP24Q9UPU5 2620 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 A0A1B0GUA9 196 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 PTGESO14684 152 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 RHOP08100 348 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 CEBPBP17676 345 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 GLRA2P23416 452 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 ELAVL2Q12926 359 aaKnown RBP18.48■□□□□ 0.55
CHMP3-203ENST00000409225 PPP2R5DQ14738 602 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 POTEHQ6S545 545 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 CELF5Q8N6W0 485 aaKnown RBP18.48■□□□□ 0.55
CHMP3-203ENST00000409225 DNASE1L2Q92874 299 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 AGXT2Q9BYV1 514 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 CHRDQ9H2X0 955 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 GDE1Q9NZC3 331 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
CHMP3-203ENST00000409225 MAN2B1O00754 1011 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 CCNT1O60563 726 aaKnown RBP18.47■□□□□ 0.55
CHMP3-203ENST00000409225 DEXIO95424 95 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 THP07101 528 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 RETP07949 1114 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 ARL2P36404 184 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 BMP2KLQ5H9B9 411 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-203ENST00000409225 NEK8Q86SG6 692 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 ZNF687Q8N1G0 1237 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 KCNB2Q92953 911 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 ELSPBP1Q96BH3 223 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 NFKBIZQ9BYH8 718 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 POLR3FQ9H1D9 316 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-203ENST00000409225 CXCL16Q9H2A7 254 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 BRD9Q9H8M2 597 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 SEMA4GQ9NTN9 838 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 SNTG2Q9NY99 539 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 KCNJ14Q9UNX9 436 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 CDY1Q9Y6F8 540 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 CFAP47Q6ZTR5 3102 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 VWA8A3KMH1 1905 aa18.47■□□□□ 0.55
CHMP3-203ENST00000409225 CCDC194A0A1B0GVG4 234 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 PPP4R3AQ6IN85 833 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 GALNT17Q6IS24 598 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 PRR23CQ6ZRP0 262 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 SKAP1Q86WV1 359 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 CCDC43Q96MW1 224 aaKnown RBP18.46■□□□□ 0.55
CHMP3-203ENST00000409225 LMAN1LQ9HAT1 526 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
CHMP3-203ENST00000409225 LRRIQ4A6NIV6 560 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 CPLX1O14810 134 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 TBX3O15119 743 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 GDF9O60383 454 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 LRP3O75074 770 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 DGAT1O75907 488 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 RECQL4O94761 1208 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 SLITRK3O94933 977 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms