RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 CYFIP2Q96F07 1278 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 MYOCQ99972 504 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 C1QTNF3Q9BXJ4 246 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 CPEB1Q9BZB8 566 aaKnown RBP4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 AURKAIP1Q9NWT8 199 aaPredicted RBP4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 TCEAL9Q9UHQ7 104 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 SERPINB13Q9UIV8 391 aa4.49□□□□□ -1.69
RNU4-1-201ENST00000363925 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 ALOX15P16050 662 aaPredicted RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 ZSCAN20P17040 1043 aaPredicted RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 VCAM1P19320 739 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 PCSK1P29120 753 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 SLC6A9P48067 706 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 RAB27AP51159 221 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 RABGGTBP53611 331 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 PLEKHG6Q3KR16 790 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 LSM12Q3MHD2 195 aaKnown RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 IFIT1BQ5T764 474 aaKnown RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 CATIPQ7Z7H3 387 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 TMPRSS6Q8IU80 811 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 SYNE4Q8N205 404 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 CPA6Q8N4T0 437 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 ZGPATQ8N5A5 531 aaKnown RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 REXO4Q9GZR2 422 aaKnown RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 NOB1Q9ULX3 412 aaKnown RBP4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 MYRFQ9Y2G1 1151 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 SIK3Q9Y2K2 1263 aa4.48□□□□□ -1.69
RNU4-1-201ENST00000363925 XDHP47989 1333 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 PJA2O43164 708 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 AMY1AP04745 511 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 ALAS1P13196 640 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 SMARCA1P28370 1054 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 CHN2P52757 468 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 KRT85P78386 507 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 CDC42EP1Q00587 391 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 FOXE3Q13461 319 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 PIN1Q13526 163 aaPredicted RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 BMT2Q1RMZ1 405 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 RABL3Q5HYI8 236 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 DBX2Q6ZNG2 339 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 SPATA31D4Q6ZUB0 917 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 CMTR2Q8IYT2 770 aaKnown RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 JPH3Q8WXH2 748 aaPredicted RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 HOXB13Q92826 284 aaPredicted RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 C11orf54Q9H0W9 315 aaPredicted RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 NRDE2Q9H7Z3 1164 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 SLAMF7Q9NQ25 335 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 MAN1C1Q9NR34 630 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 ZIM2Q9NZV7 527 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 ATP11BQ9Y2G3 1177 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 ANKRD6Q9Y2G4 727 aa4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
RNU4-1-201ENST00000363925 E2F8A0AVK6 867 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 LEFTY2O00292 366 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 ERN1O75460 977 aaKnown RBP4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 ZRANB2O95218 330 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 PDCP20941 246 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 GUCY1A2P33402 732 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 EPHB1P54762 984 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 MXRA7P84157 204 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 MCL1Q07820 350 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 TUBA3CQ13748 450 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 C1QL3Q5VWW1 255 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 TUBA3EQ6PEY2 450 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 TTC7BQ86TV6 843 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 GGNQ86UU5 652 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 GRAMD1CQ8IYS0 662 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 ZNF276Q8N554 614 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 SH2D3CQ8N5H7 860 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 CAMKK1Q8N5S9 505 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 TBC1D15Q8TC07 691 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 CASKIN2Q8WXE0 1202 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 VRK1Q99986 396 aaPredicted RBP4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 KCNH6Q9H252 994 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 GSTO2Q9H4Y5 243 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 SLC2A4RGQ9NR83 387 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 IPPQ9Y573 584 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 HS3ST3A1Q9Y663 406 aa4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
RNU4-1-201ENST00000363925 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 NPIPB8E9PQR5 432 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 WNT10BO00744 389 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 MATN3O15232 486 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 GRM6O15303 877 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 AKAP10O43572 662 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 OFD1O75665 1012 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 CD1AP06126 327 aa4.45□□□□□ -1.7
RNU4-1-201ENST00000363925 SLC6A2P23975 617 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms