RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Trim46Q7TNM2 759 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Trmt61aQ80XC2 290 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Znf598Q80YR4 908 aaKnown RBP5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 E330021D16RikQ8BW45 371 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Fam53cQ8BXQ8 393 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Nudt13Q8JZU0 352 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pank1Q8K4K6 548 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ces1dQ8VCT4 565 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cbx7Q8VDS3 158 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Olfr99Q8VFE4 305 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 StambpQ9CQ26 424 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Creld2Q9CYA0 350 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Drc3Q9D5E4 523 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ift43Q9DA69 206 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tmem8aQ9ESN3 769 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Habp4Q9JKS5 411 aaKnown RBP5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 ErmapQ9JLN5 566 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Spo11Q9WTK8 396 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 IkQ9Z1M8 557 aaKnown RBP5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ybx2Q9Z2C8 360 aaKnown RBP5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bnip3lQ9Z2F7 218 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Chd1P40201 1711 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Soga1E1U8D0 1418 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Fmn2Q9JL04 1578 aa5.58□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cfap77A0A087WRI3 283 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gucy2dA0A0U1RPR8 1117 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 MtrA6H5Y3 1253 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gm9992B2RWK3 458 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Lrrc10bG3XA50 292 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ncam2O35136 837 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bnc1O35914 961 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 PigrO70570 771 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Agr2O88312 175 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Slc27a3O88561 667 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Bdkrb2P32299 392 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Dpf3P58269 378 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Nucb2P81117 420 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Lig3P97386 1015 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Sec23aQ01405 765 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Eml4Q3UMY5 988 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pls1Q3V0K9 630 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 TmpoQ61033 693 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Crtc1Q68ED7 630 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Btbd11Q6GQW0 1109 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 E2f7Q6S7F2 904 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pcp4l1Q6W8Q3 68 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Unc93aQ710D3 458 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Snx32Q80ZJ7 404 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Maip1Q8BHE8 291 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tarsl2Q8BLY2 790 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gtf3c4Q8BMQ2 817 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Catsper4Q8BVN3 442 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pm20d1Q8C165 503 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tmc7Q8C428 726 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Plekhg6Q8R0J1 787 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Mark1Q8VHJ5 795 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Atl3Q91YH5 541 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 HnrnpllQ921F4 591 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Yaf2Q99LW6 179 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 KlbQ99N32 1043 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Smc1aQ9CU62 1233 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ephx1Q9D379 455 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Spata9Q9D9R3 252 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ap2b1Q9DBG3 937 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 CrotQ9DC50 612 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Slc6a14Q9JMA9 638 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ddx25Q9QY15 484 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Syt10Q9R0N4 523 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 RpgrQ9R0X5 1001 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Coro1bQ9WUM3 484 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Casz1Q9CWL2 1761 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Fam135bQ9DAI6 1403 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Lcmt1A0A0U1RNF2 332 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 KprpB2RUR4 657 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Gm597E9Q8J5 896 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cbfa2t2O70374 594 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pdlim1O70400 327 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Smpd2O70572 419 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 EzrP26040 586 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 IppP28575 584 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Nf2P46662 596 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ppm1aP49443 382 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Pa2g4P50580 394 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Cct4P80315 539 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 SgcdP82347 289 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Kcnj13P86046 360 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 PcQ05920 1178 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 UcmaQ14BU0 138 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 HelqQ2VPA6 1069 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Olfml2bQ3V1G4 746 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Etaa1Q5SVT3 877 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 NfkbibQ60778 359 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tnfaip2Q61333 691 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Agtpbp1Q641K1 1218 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Thoc7Q7TMY4 204 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Zfp397Q7TNK4 527 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Zswim5Q80TC6 1188 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Ints2Q80UK8 1198 aa5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Tbl3Q8C4J7 801 aaKnown RBP5.57□□□□□ -1.52
Clk1-201ENSMUST00000034868 Slc5a11Q8K0E3 673 aa5.57□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms