Protein–RNA interactions for Protein: Q80XC2

Trmt61a, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt61aQ80XC2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Trmt61aQ80XC2 Gm25239-201ENSMUST00000174915 86 ntBASIC30.05■■■□□ 2.4
Trmt61aQ80XC2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Trmt61aQ80XC2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Trmt61aQ80XC2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trmt61aQ80XC2 Psd-208ENSMUST00000224556 2034 ntBASIC28.81■■■□□ 2.2
Trmt61aQ80XC2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trmt61aQ80XC2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trmt61aQ80XC2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Trmt61aQ80XC2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trmt61aQ80XC2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trmt61aQ80XC2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trmt61aQ80XC2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trmt61aQ80XC2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trmt61aQ80XC2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trmt61aQ80XC2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trmt61aQ80XC2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trmt61aQ80XC2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trmt61aQ80XC2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Trmt61aQ80XC2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Trmt61aQ80XC2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.62■■□□□ 1.85
Trmt61aQ80XC2 Gm15042-201ENSMUST00000120212 883 ntBASIC26.51■■□□□ 1.83
Trmt61aQ80XC2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trmt61aQ80XC2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trmt61aQ80XC2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trmt61aQ80XC2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trmt61aQ80XC2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trmt61aQ80XC2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trmt61aQ80XC2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.11■■□□□ 1.77
Trmt61aQ80XC2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.03■■□□□ 1.76
Trmt61aQ80XC2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trmt61aQ80XC2 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.95■■□□□ 1.75
Trmt61aQ80XC2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Trmt61aQ80XC2 Gm15045-201ENSMUST00000117359 883 ntBASIC25.91■■□□□ 1.74
Trmt61aQ80XC2 Gm24109-201ENSMUST00000175489 103 ntBASIC25.89■■□□□ 1.74
Trmt61aQ80XC2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trmt61aQ80XC2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trmt61aQ80XC2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trmt61aQ80XC2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trmt61aQ80XC2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.71■■□□□ 1.71
Trmt61aQ80XC2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.67■■□□□ 1.7
Trmt61aQ80XC2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trmt61aQ80XC2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trmt61aQ80XC2 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.64■■□□□ 1.69
Trmt61aQ80XC2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trmt61aQ80XC2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trmt61aQ80XC2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trmt61aQ80XC2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trmt61aQ80XC2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trmt61aQ80XC2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trmt61aQ80XC2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Trmt61aQ80XC2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trmt61aQ80XC2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trmt61aQ80XC2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trmt61aQ80XC2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trmt61aQ80XC2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.18■■□□□ 1.62
Trmt61aQ80XC2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trmt61aQ80XC2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trmt61aQ80XC2 Gm23366-201ENSMUST00000175022 89 ntBASIC25.14■■□□□ 1.62
Trmt61aQ80XC2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trmt61aQ80XC2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Trmt61aQ80XC2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Trmt61aQ80XC2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trmt61aQ80XC2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trmt61aQ80XC2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trmt61aQ80XC2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trmt61aQ80XC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trmt61aQ80XC2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trmt61aQ80XC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trmt61aQ80XC2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Trmt61aQ80XC2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trmt61aQ80XC2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trmt61aQ80XC2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.75■■□□□ 1.55
Trmt61aQ80XC2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trmt61aQ80XC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Trmt61aQ80XC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trmt61aQ80XC2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trmt61aQ80XC2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trmt61aQ80XC2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trmt61aQ80XC2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trmt61aQ80XC2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.53■■□□□ 1.52
Trmt61aQ80XC2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trmt61aQ80XC2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trmt61aQ80XC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trmt61aQ80XC2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.44■■□□□ 1.5
Trmt61aQ80XC2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trmt61aQ80XC2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Trmt61aQ80XC2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trmt61aQ80XC2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.39■■□□□ 1.49
Trmt61aQ80XC2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trmt61aQ80XC2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trmt61aQ80XC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trmt61aQ80XC2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trmt61aQ80XC2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trmt61aQ80XC2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Trmt61aQ80XC2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.32■■□□□ 1.48
Trmt61aQ80XC2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trmt61aQ80XC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trmt61aQ80XC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trmt61aQ80XC2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms