Protein–RNA interactions for Protein: Q61333

Tnfaip2, Tumor necrosis factor alpha-induced protein 2, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip2Q61333 Gm25239-201ENSMUST00000174915 86 ntBASIC38.48■■■■□ 3.75
Tnfaip2Q61333 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Tnfaip2Q61333 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Tnfaip2Q61333 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Tnfaip2Q61333 Gm15042-201ENSMUST00000120212 883 ntBASIC33.85■■■■□ 3.01
Tnfaip2Q61333 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Tnfaip2Q61333 Gm24109-201ENSMUST00000175489 103 ntBASIC33.22■■■□□ 2.91
Tnfaip2Q61333 Gm15045-201ENSMUST00000117359 883 ntBASIC33.09■■■□□ 2.89
Tnfaip2Q61333 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
Tnfaip2Q61333 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Tnfaip2Q61333 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Tnfaip2Q61333 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Tnfaip2Q61333 Gm23366-201ENSMUST00000175022 89 ntBASIC32.2■■■□□ 2.75
Tnfaip2Q61333 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tnfaip2Q61333 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tnfaip2Q61333 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.69■■■□□ 2.66
Tnfaip2Q61333 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tnfaip2Q61333 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tnfaip2Q61333 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tnfaip2Q61333 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tnfaip2Q61333 Psd-208ENSMUST00000224556 2034 ntBASIC31.32■■■□□ 2.6
Tnfaip2Q61333 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tnfaip2Q61333 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Tnfaip2Q61333 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tnfaip2Q61333 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tnfaip2Q61333 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tnfaip2Q61333 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.06■■■□□ 2.56
Tnfaip2Q61333 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.99■■■□□ 2.55
Tnfaip2Q61333 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Tnfaip2Q61333 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Tnfaip2Q61333 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.74■■■□□ 2.51
Tnfaip2Q61333 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.58■■■□□ 2.49
Tnfaip2Q61333 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Tnfaip2Q61333 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.52■■■□□ 2.48
Tnfaip2Q61333 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tnfaip2Q61333 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Tnfaip2Q61333 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tnfaip2Q61333 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Tnfaip2Q61333 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.31■■■□□ 2.44
Tnfaip2Q61333 Gm25238-201ENSMUST00000174914 89 ntBASIC30.29■■■□□ 2.44
Tnfaip2Q61333 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Tnfaip2Q61333 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Tnfaip2Q61333 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Tnfaip2Q61333 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.99■■■□□ 2.39
Tnfaip2Q61333 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Tnfaip2Q61333 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Tnfaip2Q61333 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Tnfaip2Q61333 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Tnfaip2Q61333 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
Tnfaip2Q61333 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Tnfaip2Q61333 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.74■■■□□ 2.35
Tnfaip2Q61333 Gm27325-201ENSMUST00000175467 74 ntBASIC29.7■■■□□ 2.35
Tnfaip2Q61333 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.64■■■□□ 2.34
Tnfaip2Q61333 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tnfaip2Q61333 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Tnfaip2Q61333 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.46■■■□□ 2.31
Tnfaip2Q61333 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Tnfaip2Q61333 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Tnfaip2Q61333 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.41■■■□□ 2.3
Tnfaip2Q61333 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.38■■■□□ 2.29
Tnfaip2Q61333 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tnfaip2Q61333 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
Tnfaip2Q61333 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tnfaip2Q61333 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.29■■■□□ 2.28
Tnfaip2Q61333 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.25■■■□□ 2.27
Tnfaip2Q61333 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Tnfaip2Q61333 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tnfaip2Q61333 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tnfaip2Q61333 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tnfaip2Q61333 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Tnfaip2Q61333 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Tnfaip2Q61333 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Tnfaip2Q61333 Rab21-202ENSMUST00000218831 843 ntBASIC29.04■■■□□ 2.24
Tnfaip2Q61333 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Tnfaip2Q61333 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Tnfaip2Q61333 Gm25262-201ENSMUST00000174934 133 ntBASIC28.96■■■□□ 2.23
Tnfaip2Q61333 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.92■■■□□ 2.22
Tnfaip2Q61333 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.91■■■□□ 2.22
Tnfaip2Q61333 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.9■■■□□ 2.22
Tnfaip2Q61333 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Tnfaip2Q61333 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tnfaip2Q61333 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tnfaip2Q61333 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.79■■■□□ 2.2
Tnfaip2Q61333 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Tnfaip2Q61333 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Tnfaip2Q61333 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tnfaip2Q61333 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tnfaip2Q61333 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tnfaip2Q61333 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Tnfaip2Q61333 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tnfaip2Q61333 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.56■■■□□ 2.16
Tnfaip2Q61333 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tnfaip2Q61333 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.55■■■□□ 2.16
Tnfaip2Q61333 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.48■■■□□ 2.15
Tnfaip2Q61333 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tnfaip2Q61333 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tnfaip2Q61333 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tnfaip2Q61333 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tnfaip2Q61333 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.36■■■□□ 2.13
Tnfaip2Q61333 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms