RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YNL260CP53846 198 aa0.67□□□□□ -2.3
NIP100YPL174C ARP5P53946 755 aa0.67□□□□□ -2.3
NIP100YPL174C PEX12Q04370 399 aa0.67□□□□□ -2.3
NIP100YPL174C YOR268CQ08734 132 aa0.67□□□□□ -2.3
NIP100YPL174C MDN1Q12019 4910 aaKnown RBP0.67□□□□□ -2.3
NIP100YPL174C YCR102CP25608 368 aa0.66□□□□□ -2.3
NIP100YPL174C YBL112CQ3E7Y4 105 aa0.66□□□□□ -2.3
NIP100YPL174C SWR1Q05471 1514 aa0.66□□□□□ -2.3
NIP100YPL174C YAL064W-BO13512 126 aa0.66□□□□□ -2.3
NIP100YPL174C ATP6P00854 259 aa0.66□□□□□ -2.3
NIP100YPL174C GDH2P33327 1092 aaKnown RBP0.66□□□□□ -2.3
NIP100YPL174C NAS2P40555 220 aa0.66□□□□□ -2.3
NIP100YPL174C MGR3Q04472 501 aa0.66□□□□□ -2.3
NIP100YPL174C YLR179CQ06252 201 aaKnown RBP0.66□□□□□ -2.3
NIP100YPL174C BCP1Q06338 283 aa0.66□□□□□ -2.3
NIP100YPL174C PGC1Q08959 321 aa0.66□□□□□ -2.3
NIP100YPL174C AI5_BETAQ9ZZX0 354 aa0.66□□□□□ -2.3
NIP100YPL174C SHQ1P40486 507 aaPredicted RBP0.65□□□□□ -2.31
NIP100YPL174C ERG25P53045 309 aa0.65□□□□□ -2.31
NIP100YPL174C ATO3Q12359 275 aa0.65□□□□□ -2.31
NIP100YPL174C YBL008W-AQ3E821 79 aa0.65□□□□□ -2.31
NIP100YPL174C STH1P32597 1359 aa0.65□□□□□ -2.31
NIP100YPL174C YOL162WP0CF19 215 aa0.65□□□□□ -2.31
NIP100YPL174C RCN1P36054 211 aa0.65□□□□□ -2.31
NIP100YPL174C YKR045CP36138 183 aa0.65□□□□□ -2.31
NIP100YPL174C PEP8P40335 379 aa0.65□□□□□ -2.31
NIP100YPL174C YIL002W-AQ3E7Z5 69 aa0.65□□□□□ -2.31
NIP100YPL174C UBR2Q07963 1872 aa0.64□□□□□ -2.31
NIP100YPL174C RPL4AP10664 362 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C FBA1P14540 359 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C UGA1P17649 471 aa0.64□□□□□ -2.31
NIP100YPL174C TIF34P40217 347 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C PRM10P42946 383 aa0.64□□□□□ -2.31
NIP100YPL174C AGX1P43567 385 aa0.64□□□□□ -2.31
NIP100YPL174C RPL4BP49626 362 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C MDM34P53083 459 aa0.64□□□□□ -2.31
NIP100YPL174C YNR062CP53748 327 aa0.64□□□□□ -2.31
NIP100YPL174C EBS1Q03466 884 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C DCR2Q05924 578 aa0.64□□□□□ -2.31
NIP100YPL174C SMT3Q12306 101 aaKnown RBP0.64□□□□□ -2.31
NIP100YPL174C SCM4P32564 187 aa0.64□□□□□ -2.31
NIP100YPL174C VMA11P32842 164 aa0.64□□□□□ -2.31
NIP100YPL174C CIS3P47001 227 aa0.64□□□□□ -2.31
NIP100YPL174C CUR1Q06469 252 aa0.64□□□□□ -2.31
NIP100YPL174C YHR032W-AP0C5N6 59 aa0.63□□□□□ -2.31
NIP100YPL174C TOM40P23644 387 aaKnown RBP0.63□□□□□ -2.31
NIP100YPL174C YJR012CP47087 207 aa0.63□□□□□ -2.31
NIP100YPL174C IBA57P47158 497 aa0.63□□□□□ -2.31
NIP100YPL174C PNC1P53184 216 aaKnown RBP0.63□□□□□ -2.31
NIP100YPL174C YPR011CQ12251 326 aa0.63□□□□□ -2.31
NIP100YPL174C SSK22P25390 1331 aaPredicted RBP0.63□□□□□ -2.31
NIP100YPL174C REV3P14284 1504 aa0.63□□□□□ -2.31
NIP100YPL174C MRP1P10662 321 aaKnown RBP0.63□□□□□ -2.31
NIP100YPL174C POF1P25576 258 aa0.63□□□□□ -2.31
NIP100YPL174C OST2P46964 130 aa0.63□□□□□ -2.31
NIP100YPL174C TRM44Q02648 567 aaKnown RBP0.63□□□□□ -2.31
NIP100YPL174C GOT1Q03554 138 aa0.63□□□□□ -2.31
NIP100YPL174C ATC1Q04005 294 aa0.63□□□□□ -2.31
NIP100YPL174C REX3Q12090 404 aa0.63□□□□□ -2.31
NIP100YPL174C XRN1P22147 1528 aaKnown RBP0.63□□□□□ -2.31
NIP100YPL174C SGA1P08019 549 aa0.62□□□□□ -2.31
NIP100YPL174C PRM9P39551 298 aa0.62□□□□□ -2.31
NIP100YPL174C AYR1P40471 297 aa0.62□□□□□ -2.31
NIP100YPL174C MAL13P53338 473 aa0.62□□□□□ -2.31
NIP100YPL174C SDC1Q03323 175 aa0.62□□□□□ -2.31
NIP100YPL174C EMI1Q04406 187 aa0.62□□□□□ -2.31
NIP100YPL174C YPR147CQ06522 304 aaKnown RBP0.62□□□□□ -2.31
NIP100YPL174C MRPL23Q12487 163 aaPredicted RBP0.62□□□□□ -2.31
NIP100YPL174C KOG1P38873 1557 aa0.62□□□□□ -2.31
NIP100YPL174C RPC40P07703 335 aaKnown RBP0.62□□□□□ -2.31
NIP100YPL174C MET16P18408 261 aaPredicted RBP0.62□□□□□ -2.31
NIP100YPL174C FCY21P40039 528 aa0.62□□□□□ -2.31
NIP100YPL174C ARC15P40518 154 aaRIP-Chip data0.62□□□□□ -2.31not detected
NIP100YPL174C YGR026WP53217 278 aa0.62□□□□□ -2.31
NIP100YPL174C ERV29P53337 310 aa0.62□□□□□ -2.31
NIP100YPL174C NOT5Q12514 560 aaPredicted RBP0.62□□□□□ -2.31
NIP100YPL174C PPH21P23594 369 aa0.61□□□□□ -2.31
NIP100YPL174C SKI2P35207 1287 aaKnown RBP RIP-Chip data0.61□□□□□ -2.31not detected
NIP100YPL174C YHL049CP38722 271 aa0.61□□□□□ -2.31
NIP100YPL174C AAH1P53909 347 aa0.61□□□□□ -2.31
NIP100YPL174C ASI3P53983 676 aa0.61□□□□□ -2.31
NIP100YPL174C YDR209CQ03480 137 aa0.61□□□□□ -2.31
NIP100YPL174C YPL119C-AQ3E751 87 aa0.61□□□□□ -2.31
NIP100YPL174C HIS1P00498 297 aaKnown RBP0.61□□□□□ -2.31
NIP100YPL174C SGE1P33335 543 aa0.61□□□□□ -2.31
NIP100YPL174C HSM3P38348 480 aa0.61□□□□□ -2.31
NIP100YPL174C CDC40P40968 455 aaPredicted RBP0.61□□□□□ -2.31
NIP100YPL174C JHD2P47156 728 aaPredicted RBP0.61□□□□□ -2.31
NIP100YPL174C DAD3P69850 94 aa0.61□□□□□ -2.31
NIP100YPL174C SPP2Q02521 185 aa0.61□□□□□ -2.31
NIP100YPL174C CTF19Q02732 369 aa0.61□□□□□ -2.31
NIP100YPL174C SPO19Q03029 223 aa0.61□□□□□ -2.31
NIP100YPL174C INM2Q05533 292 aa0.61□□□□□ -2.31
NIP100YPL174C YLR413WQ06689 675 aa0.61□□□□□ -2.31
NIP100YPL174C CHD1P32657 1468 aa0.6□□□□□ -2.31
NIP100YPL174C MDS3P53094 1487 aa0.6□□□□□ -2.31
NIP100YPL174C SEC22P22214 214 aa0.6□□□□□ -2.31
NIP100YPL174C PEX4P29340 183 aa0.6□□□□□ -2.31
NIP100YPL174C SER33P40510 469 aa0.6□□□□□ -2.31
NIP100YPL174C EMC2P47133 292 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms