RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	CPT1	P17898	393 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	CKA2	P19454	339 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	RPL24B	P24000	155 aa	Known RBP	1.29	□□□□□ -2.2
RLM1	YPL089C	PBN1	P25580	416 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	MID2	P36027	376 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	HMT1	P38074	348 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	MRPS9	P38120	278 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	PHO89	P38361	574 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	BDH1	P39714	382 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	FRT2	P39734	528 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	RPC17	P47076	161 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	YJR079W	P47126	109 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	JHD2	P47156	728 aa	Predicted RBP	1.29	□□□□□ -2.2
RLM1	YPL089C	SWT21	P53873	357 aa	Predicted RBP	1.29	□□□□□ -2.2
RLM1	YPL089C	APJ1	P53940	528 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	MRX8	Q05473	314 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	NNT1	Q05874	261 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	COQ10	Q08058	207 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	SNU23	Q12368	194 aa	Predicted RBP	1.29	□□□□□ -2.2
RLM1	YPL089C	ATG5	Q12380	294 aa		1.29	□□□□□ -2.2
RLM1	YPL089C	CDC36	P06100	191 aa	Predicted RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	COS2	P0CX12	379 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	COS3	P0CX13	379 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	NHP6B	P11633	99 aa	Known RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	MRPL25	P23369	157 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	ERG2	P32352	222 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	VMA6	P32366	345 aa	Known RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	VPS21	P36017	210 aa	Known RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	YBL081W	P38180	368 aa	Known RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	YHI9	P38765	294 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	COS4	P43542	379 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	SNZ3	P43545	298 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	UFD1	P53044	361 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	SNZ2	P53824	298 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	OSH6	Q02201	448 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	SMD1	Q02260	146 aa	Predicted RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	YMR166C	Q03829	368 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	GTO3	Q04806	366 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	PEX10	Q05568	337 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	DCR2	Q05924	578 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	YPR098C	Q06089	161 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	ATG17	Q06410	417 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	PRE7	P23724	241 aa	Known RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	CSG2	P35206	410 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	FZO1	P38297	855 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	MIC12	P38341	106 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	YHL044W	P38727	235 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	GOS1	P38736	223 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	RPE1	P46969	238 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	FLC3	P53121	802 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	SLX9	P53251	210 aa	Predicted RBP	1.28	□□□□□ -2.2
RLM1	YPL089C	HST4	P53688	370 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	ZRG17	P53735	605 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	AAH1	P53909	347 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	YPL264C	Q08980	353 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	ADF1	Q2V2Q1	113 aa		1.28	□□□□□ -2.2
RLM1	YPL089C	CUP2	P15315	225 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	COQ1	P18900	473 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YMR31	P19955	123 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YCR102C	P25608	368 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	SGE1	P33335	543 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YKL075C	P36083	450 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	RIB1	P38066	345 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	CUE1	P38428	203 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	ARN2	P38724	620 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	TRR2	P38816	342 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YPL039W	Q03080	316 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	TVP15	Q03860	143 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	ECM11	Q04110	302 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	DXO1	Q06349	442 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YPR147C	Q06522	304 aa	Known RBP	1.27	□□□□□ -2.21
RLM1	YPL089C	YPL150W	Q12152	901 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YPS3	Q12303	508 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YKR104W	P0CE69	306 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YAK1	P14680	807 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	MAL32	P38158	584 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	URA8	P38627	578 aa	Predicted RBP	1.27	□□□□□ -2.21
RLM1	YPL089C	SIP3	P38717	1229 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	RTC3	P38804	111 aa	Predicted RBP	1.27	□□□□□ -2.21
RLM1	YPL089C	YHR127W	P38833	243 aa	Known RBP	1.27	□□□□□ -2.21
RLM1	YPL089C	YFR045W	P43617	309 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	CPR7	P47103	393 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	CGR1	P53188	120 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	MAL12	P53341	584 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	RHO3	Q00245	231 aa	Known RBP	1.27	□□□□□ -2.21
RLM1	YPL089C	SPG4	Q04438	115 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	IES3	Q12345	250 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YBL112C	Q3E7Y4	105 aa		1.27	□□□□□ -2.21
RLM1	YPL089C	YBR121C-A	P0C5L4	52 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	STE18	P18852	110 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	CDC10	P25342	322 aa	Known RBP	1.26	□□□□□ -2.21
RLM1	YPL089C	PRP18	P33411	251 aa	Predicted RBP	1.26	□□□□□ -2.21
RLM1	YPL089C	CBT1	P36038	271 aa	Predicted RBP	1.26	□□□□□ -2.21
RLM1	YPL089C	DRE2	P36152	348 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	MRPL39	P36533	70 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	TRM7	P38238	310 aa	Known RBP	1.26	□□□□□ -2.21
RLM1	YPL089C	SPL2	P38839	148 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	SUR2	P38992	349 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	ERG28	P40030	148 aa		1.26	□□□□□ -2.21
RLM1	YPL089C	RAD17	P48581	401 aa		1.26	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 77.3 ms