RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C BER1Q06688 274 aaKnown RBP1.87□□□□□ -2.11
SHE4YOR035C TFS1P14306 219 aa1.87□□□□□ -2.11
SHE4YOR035C PHO80P20052 293 aa1.87□□□□□ -2.11
SHE4YOR035C RPS0AP32905 252 aaKnown RBP1.87□□□□□ -2.11
SHE4YOR035C YBL081WP38180 368 aaKnown RBP1.87□□□□□ -2.11
SHE4YOR035C MBA1P38300 278 aa1.87□□□□□ -2.11
SHE4YOR035C AGP3P43548 558 aa1.87□□□□□ -2.11
SHE4YOR035C LOC1P43586 204 aaPredicted RBP1.87□□□□□ -2.11
SHE4YOR035C PNC1P53184 216 aaKnown RBP1.87□□□□□ -2.11
SHE4YOR035C ARP5P53946 755 aa1.87□□□□□ -2.11
SHE4YOR035C SPO19Q03029 223 aa1.87□□□□□ -2.11
SHE4YOR035C YML018CQ03730 393 aa1.87□□□□□ -2.11
SHE4YOR035C GPN3Q06543 272 aa1.87□□□□□ -2.11
SHE4YOR035C ATP6P00854 259 aa1.86□□□□□ -2.11
SHE4YOR035C KRE1P17260 313 aa1.86□□□□□ -2.11
SHE4YOR035C AEP1P32493 518 aa1.86□□□□□ -2.11
SHE4YOR035C YKR032WP36127 104 aa1.86□□□□□ -2.11
SHE4YOR035C SEN34P39707 275 aa1.86□□□□□ -2.11
SHE4YOR035C RSM27P53305 110 aa1.86□□□□□ -2.11
SHE4YOR035C SWT21P53873 357 aaPredicted RBP1.86□□□□□ -2.11
SHE4YOR035C YDL144CQ07589 356 aa1.86□□□□□ -2.11
SHE4YOR035C YOR114WQ12219 294 aa1.86□□□□□ -2.11
SHE4YOR035C LYS2P07702 1392 aa1.86□□□□□ -2.11
SHE4YOR035C IRA1P18963 3092 aa1.86□□□□□ -2.11
SHE4YOR035C ILV1P00927 576 aaKnown RBP1.86□□□□□ -2.11
SHE4YOR035C UTR5P32630 166 aa1.86□□□□□ -2.11
SHE4YOR035C COG7P53195 279 aa1.86□□□□□ -2.11
SHE4YOR035C ALG9P53868 555 aaKnown RBP1.86□□□□□ -2.11
SHE4YOR035C YNL050CP53952 270 aa1.86□□□□□ -2.11
SHE4YOR035C SUA5P32579 426 aa1.85□□□□□ -2.11
SHE4YOR035C HIS2P38635 335 aa1.85□□□□□ -2.11
SHE4YOR035C MIG2P53035 382 aa1.85□□□□□ -2.11
SHE4YOR035C YNL260CP53846 198 aa1.85□□□□□ -2.11
SHE4YOR035C MIX17Q03667 156 aa1.85□□□□□ -2.11
SHE4YOR035C BCP1Q06338 283 aa1.85□□□□□ -2.11
SHE4YOR035C PRR2Q12310 699 aa1.85□□□□□ -2.11
SHE4YOR035C ADE6P38972 1358 aaKnown RBP1.85□□□□□ -2.11
SHE4YOR035C MRPL40P36534 297 aa1.85□□□□□ -2.11
SHE4YOR035C PHO89P38361 574 aa1.85□□□□□ -2.11
SHE4YOR035C SHQ1P40486 507 aaPredicted RBP1.85□□□□□ -2.11
SHE4YOR035C GCD14P46959 383 aaPredicted RBP1.85□□□□□ -2.11
SHE4YOR035C RPE1P46969 238 aa1.85□□□□□ -2.11
SHE4YOR035C ECM18Q04623 453 aa1.85□□□□□ -2.11
SHE4YOR035C TAF9Q05027 157 aa1.85□□□□□ -2.11
SHE4YOR035C YLL007CQ07799 665 aa1.85□□□□□ -2.11
SHE4YOR035C TDH2P00358 332 aaKnown RBP1.84□□□□□ -2.11
SHE4YOR035C OSM1P21375 501 aaKnown RBP1.84□□□□□ -2.11
SHE4YOR035C COT1P32798 439 aa1.84□□□□□ -2.11
SHE4YOR035C TPN1P53099 579 aa1.84□□□□□ -2.11
SHE4YOR035C YGL185CP53100 379 aa1.84□□□□□ -2.11
SHE4YOR035C CLP1Q08685 445 aaPredicted RBP1.84□□□□□ -2.11
SHE4YOR035C FEX1Q08913 375 aa1.84□□□□□ -2.11
SHE4YOR035C FEX2Q08991 375 aa1.84□□□□□ -2.11
SHE4YOR035C YIL002W-AQ3E7Z5 69 aa1.84□□□□□ -2.11
SHE4YOR035C TUS1Q06412 1307 aa1.84□□□□□ -2.12
SHE4YOR035C RSA4P25382 515 aaKnown RBP1.84□□□□□ -2.12
SHE4YOR035C KRE6P32486 720 aa1.84□□□□□ -2.12
SHE4YOR035C YER084WP40057 128 aa1.84□□□□□ -2.12
SHE4YOR035C ERV41Q04651 352 aa1.84□□□□□ -2.12
SHE4YOR035C MRPL23Q12487 163 aaPredicted RBP1.84□□□□□ -2.12
SHE4YOR035C IRA2P19158 3079 aa1.83□□□□□ -2.12
SHE4YOR035C YMR316C-AI2HB70 103 aa1.83□□□□□ -2.12
SHE4YOR035C CAT2P32796 670 aaKnown RBP1.83□□□□□ -2.12
SHE4YOR035C TRM7P38238 310 aaKnown RBP1.83□□□□□ -2.12
SHE4YOR035C VPS45P38932 577 aa1.83□□□□□ -2.12
SHE4YOR035C VPS60Q03390 229 aa1.83□□□□□ -2.12
SHE4YOR035C TVP15Q03860 143 aa1.83□□□□□ -2.12
SHE4YOR035C YLR413WQ06689 675 aa1.83□□□□□ -2.12
SHE4YOR035C YPL150WQ12152 901 aa1.83□□□□□ -2.12
SHE4YOR035C GAL7P08431 366 aa1.83□□□□□ -2.12
SHE4YOR035C ATG15P25641 520 aa1.83□□□□□ -2.12
SHE4YOR035C YER188WP40103 239 aa1.83□□□□□ -2.12
SHE4YOR035C CPD1P53314 239 aa1.83□□□□□ -2.12
SHE4YOR035C TIM22Q12328 207 aa1.83□□□□□ -2.12
SHE4YOR035C ATG5Q12380 294 aa1.83□□□□□ -2.12
SHE4YOR035C PET494P07390 489 aaPredicted RBP1.82□□□□□ -2.12
SHE4YOR035C DAL80P26343 269 aa1.82□□□□□ -2.12
SHE4YOR035C CAB3P36076 571 aa1.82□□□□□ -2.12
SHE4YOR035C POP8P38208 133 aa1.82□□□□□ -2.12
SHE4YOR035C SCC4P40090 624 aa1.82□□□□□ -2.12
SHE4YOR035C SYF2P53277 215 aaPredicted RBP1.82□□□□□ -2.12
SHE4YOR035C ACC1Q00955 2233 aaKnown RBP1.82□□□□□ -2.12
SHE4YOR035C MEK1P24719 497 aaPredicted RBP1.81□□□□□ -2.12
SHE4YOR035C ERG2P32352 222 aa1.81□□□□□ -2.12
SHE4YOR035C PEX31P53203 462 aa1.81□□□□□ -2.12
SHE4YOR035C UBR2Q07963 1872 aa1.81□□□□□ -2.12
SHE4YOR035C RPO41P13433 1351 aaKnown RBP1.81□□□□□ -2.12
SHE4YOR035C YSR3P23501 404 aa1.81□□□□□ -2.12
SHE4YOR035C SPL2P38839 148 aa1.81□□□□□ -2.12
SHE4YOR035C PCL7P40186 285 aa1.81□□□□□ -2.12
SHE4YOR035C TRM44Q02648 567 aaKnown RBP1.81□□□□□ -2.12
SHE4YOR035C CDD1Q06549 142 aa1.81□□□□□ -2.12
SHE4YOR035C FMP16Q12497 93 aa1.81□□□□□ -2.12
SHE4YOR035C FLO1P32768 1537 aa1.81□□□□□ -2.12
SHE4YOR035C FRS2P15625 503 aaKnown RBP1.8□□□□□ -2.12
SHE4YOR035C DBP3P20447 523 aaKnown RBP1.8□□□□□ -2.12
SHE4YOR035C EGD1Q02642 157 aaKnown RBP1.8□□□□□ -2.12
SHE4YOR035C PMD1P32634 1753 aa1.8□□□□□ -2.12
SHE4YOR035C HKR1P41809 1802 aa1.8□□□□□ -2.12
SHE4YOR035C ZWF1P11412 505 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms