RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W ACH1P32316 526 aa3.36□□□□□ -1.87
ROD1YOR018W TMA19P35691 167 aaKnown RBP3.36□□□□□ -1.87
ROD1YOR018W ANR2P36090 516 aaPredicted RBP3.36□□□□□ -1.87
ROD1YOR018W YHR122WP38829 231 aa3.36□□□□□ -1.87
ROD1YOR018W HPA3P39979 161 aa3.36□□□□□ -1.87
ROD1YOR018W AIM20P40451 204 aa3.36□□□□□ -1.87
ROD1YOR018W YIL060WP40519 144 aa3.36□□□□□ -1.87
ROD1YOR018W PMT5P52867 743 aa3.36□□□□□ -1.87
ROD1YOR018W ERV29P53337 310 aa3.36□□□□□ -1.87
ROD1YOR018W CIK1Q01649 594 aa3.36□□□□□ -1.87
ROD1YOR018W VBA4Q04602 768 aaKnown RBP3.36□□□□□ -1.87
ROD1YOR018W MRX8Q05473 314 aa3.36□□□□□ -1.87
ROD1YOR018W SYC1Q08553 188 aaPredicted RBP3.36□□□□□ -1.87
ROD1YOR018W YPL278CQ08990 100 aa3.36□□□□□ -1.87
ROD1YOR018W TMS1Q12116 473 aa3.36□□□□□ -1.87
ROD1YOR018W FRE6Q12473 712 aa3.36□□□□□ -1.87
ROD1YOR018W FOL3Q12676 427 aaPredicted RBP3.36□□□□□ -1.87
ROD1YOR018W Q0144Q9ZZW2 109 aa3.36□□□□□ -1.87
ROD1YOR018W PEP4P07267 405 aaKnown RBP3.36□□□□□ -1.87
ROD1YOR018W ERG8P24521 451 aa3.36□□□□□ -1.87
ROD1YOR018W CNE1P27825 502 aa3.36□□□□□ -1.87
ROD1YOR018W BUR6P40096 142 aa3.36□□□□□ -1.87
ROD1YOR018W YKE4P40544 346 aa3.36□□□□□ -1.87
ROD1YOR018W PMT6P42934 759 aa3.36□□□□□ -1.87
ROD1YOR018W IRC18P47056 224 aa3.36□□□□□ -1.87
ROD1YOR018W ECL1P48235 211 aa3.36□□□□□ -1.87
ROD1YOR018W MSE1P48525 536 aa3.36□□□□□ -1.87
ROD1YOR018W YPL039WQ03080 316 aa3.36□□□□□ -1.87
ROD1YOR018W MLC2Q06580 163 aa3.36□□□□□ -1.87
ROD1YOR018W NCE102Q12207 173 aaRIP-Chip data3.36□□□□□ -1.87not detected
ROD1YOR018W ATG15P25641 520 aa3.35□□□□□ -1.87
ROD1YOR018W HOM6P31116 359 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W DOA4P32571 926 aa3.35□□□□□ -1.87
ROD1YOR018W LST4P34239 828 aa3.35□□□□□ -1.87
ROD1YOR018W MTH1P35198 433 aa3.35□□□□□ -1.87
ROD1YOR018W SDS24P38314 527 aa3.35□□□□□ -1.87
ROD1YOR018W VBA2P38358 474 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W URM1P40554 99 aaPredicted RBP3.35□□□□□ -1.87
ROD1YOR018W DIE2P50076 525 aa3.35□□□□□ -1.87
ROD1YOR018W IMD3P50095 523 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W YGR042WP53227 271 aa3.35□□□□□ -1.87
ROD1YOR018W NGL2Q03264 515 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W TPO3Q06451 622 aa3.35□□□□□ -1.87
ROD1YOR018W MCH4Q08268 501 aa3.35□□□□□ -1.87
ROD1YOR018W INP53Q12271 1107 aa3.35□□□□□ -1.87
ROD1YOR018W MCT1Q12283 360 aa3.35□□□□□ -1.87
ROD1YOR018W YPR053CQ6Q5F3 151 aa3.35□□□□□ -1.87
ROD1YOR018W MTR10Q99189 972 aa3.35□□□□□ -1.87
ROD1YOR018W CUP1-1P0CX80 61 aa3.35□□□□□ -1.87
ROD1YOR018W CUP1-2P0CX81 61 aa3.35□□□□□ -1.87
ROD1YOR018W MRP1P10662 321 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W GRX2P17695 143 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W DBF2P22204 572 aa3.35□□□□□ -1.87
ROD1YOR018W YCP4P25349 247 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W CAM1P29547 415 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W SPT14P32363 452 aa3.35□□□□□ -1.87
ROD1YOR018W MRPS5P33759 307 aa3.35□□□□□ -1.87
ROD1YOR018W SRP102P36057 244 aaPredicted RBP3.35□□□□□ -1.87
ROD1YOR018W YKR073CP36153 106 aa3.35□□□□□ -1.87
ROD1YOR018W TAT1P38085 619 aa3.35□□□□□ -1.87
ROD1YOR018W MSS4P38994 779 aa3.35□□□□□ -1.87
ROD1YOR018W CAT5P41735 233 aa3.35□□□□□ -1.87
ROD1YOR018W PXR1P53335 271 aaPredicted RBP3.35□□□□□ -1.87
ROD1YOR018W YOR283WQ12040 230 aaKnown RBP3.35□□□□□ -1.87
ROD1YOR018W RNH203Q12338 110 aa3.35□□□□□ -1.87
ROD1YOR018W PDX1P16451 410 aa3.34□□□□□ -1.87
ROD1YOR018W AHC2P25649 128 aa3.34□□□□□ -1.87
ROD1YOR018W PAU2P32612 120 aa3.34□□□□□ -1.87
ROD1YOR018W SFK1P35735 353 aa3.34□□□□□ -1.87
ROD1YOR018W FRM2P37261 193 aa3.34□□□□□ -1.87
ROD1YOR018W TCM62P38228 572 aaKnown RBP3.34□□□□□ -1.87
ROD1YOR018W YIL067CP40514 678 aa3.34□□□□□ -1.87
ROD1YOR018W BUD8P41698 603 aa3.34□□□□□ -1.87
ROD1YOR018W BNA6P43619 295 aa3.34□□□□□ -1.87
ROD1YOR018W VHT1P53241 593 aa3.34□□□□□ -1.87
ROD1YOR018W YKR005CQ02203 525 aa3.34□□□□□ -1.87
ROD1YOR018W AIM36Q03798 255 aa3.34□□□□□ -1.87
ROD1YOR018W GRX3Q03835 250 aa3.34□□□□□ -1.87
ROD1YOR018W BAG7Q12128 409 aa3.34□□□□□ -1.87
ROD1YOR018W ORT1Q12375 292 aa3.34□□□□□ -1.87
ROD1YOR018W DIF1O13577 133 aa3.34□□□□□ -1.88
ROD1YOR018W RPL7AP05737 244 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W YGL041W-AP0C5N3 154 aa3.34□□□□□ -1.88
ROD1YOR018W PDA1P16387 420 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W RFA1P22336 621 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W PUP2P32379 260 aa3.34□□□□□ -1.88
ROD1YOR018W ZUO1P32527 433 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W SPT10P35208 640 aa3.34□□□□□ -1.88
ROD1YOR018W SHE2P36068 246 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
ROD1YOR018W FIG1P38224 298 aa3.34□□□□□ -1.88
ROD1YOR018W YER184CP39961 794 aa3.34□□□□□ -1.88
ROD1YOR018W FCY21P40039 528 aa3.34□□□□□ -1.88
ROD1YOR018W DPB11P47027 764 aaPredicted RBP3.34□□□□□ -1.88
ROD1YOR018W MDE1P47095 244 aa3.34□□□□□ -1.88
ROD1YOR018W HOL1P53389 586 aa3.34□□□□□ -1.88
ROD1YOR018W RSM10Q03201 203 aa3.34□□□□□ -1.88
ROD1YOR018W PEX10Q05568 337 aa3.34□□□□□ -1.88
ROD1YOR018W CRR1Q05790 422 aa3.34□□□□□ -1.88
ROD1YOR018W YLR283WQ05867 314 aa3.34□□□□□ -1.88
ROD1YOR018W NNT1Q05874 261 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms