RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W TDH2P00358 332 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W PRB1P09232 635 aa1.63□□□□□ -2.15
RTP1YMR185W UBI4P0CG63 381 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W RPL40AP0CH08 128 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W RPL40BP0CH09 128 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W NAM2P11325 894 aa1.63□□□□□ -2.15
RTP1YMR185W FUR1P18562 216 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W SEC59P20048 519 aa1.63□□□□□ -2.15
RTP1YMR185W YCR100CP25606 316 aa1.63□□□□□ -2.15
RTP1YMR185W MSK1P32048 576 aa1.63□□□□□ -2.15
RTP1YMR185W MRP20P32387 263 aa1.63□□□□□ -2.15
RTP1YMR185W SIP1P32578 815 aa1.63□□□□□ -2.15
RTP1YMR185W NRP1P32770 719 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
RTP1YMR185W FMT1P32785 401 aa1.63□□□□□ -2.15
RTP1YMR185W YKL071WP36086 256 aa1.63□□□□□ -2.15
RTP1YMR185W MRPL4P36517 319 aa1.63□□□□□ -2.15
RTP1YMR185W SDH4P37298 181 aa1.63□□□□□ -2.15
RTP1YMR185W RRN10P38204 145 aa1.63□□□□□ -2.15
RTP1YMR185W VBA2P38358 474 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W AIM2P39721 246 aa1.63□□□□□ -2.15
RTP1YMR185W VPS52P39904 641 aa1.63□□□□□ -2.15
RTP1YMR185W LSM4P40070 187 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W SDP1P40479 209 aa1.63□□□□□ -2.15
RTP1YMR185W QRI1P43123 477 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W ALK1P43633 760 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W MCM22P47167 239 aa1.63□□□□□ -2.15
RTP1YMR185W PNC1P53184 216 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W RSM27P53305 110 aa1.63□□□□□ -2.15
RTP1YMR185W MAL12P53341 584 aa1.63□□□□□ -2.15
RTP1YMR185W OCA2P53949 197 aa1.63□□□□□ -2.15
RTP1YMR185W ACT1P60010 375 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W APM1Q00776 475 aaPredicted RBP1.63□□□□□ -2.15
RTP1YMR185W ACS1Q01574 713 aa1.63□□□□□ -2.15
RTP1YMR185W SMA2Q04658 369 aa1.63□□□□□ -2.15
RTP1YMR185W YMR252CQ04814 134 aa1.63□□□□□ -2.15
RTP1YMR185W ROY1Q04847 553 aa1.63□□□□□ -2.15
RTP1YMR185W SNO4Q04902 237 aa1.63□□□□□ -2.15
RTP1YMR185W THI73Q07904 523 aa1.63□□□□□ -2.15
RTP1YMR185W PML1Q07930 204 aaPredicted RBP1.63□□□□□ -2.15
RTP1YMR185W HSP33Q08914 237 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W GUP2Q08929 609 aa1.63□□□□□ -2.15
RTP1YMR185W HSP32Q08992 237 aa1.63□□□□□ -2.15
RTP1YMR185W DCN1Q12395 269 aa1.63□□□□□ -2.15
RTP1YMR185W EAF3Q12432 401 aa1.63□□□□□ -2.15
RTP1YMR185W YDL007C-AQ2V2Q0 85 aa1.63□□□□□ -2.15
RTP1YMR185W YDR524C-BQ3E6R4 66 aa1.63□□□□□ -2.15
RTP1YMR185W COX19Q3E731 98 aa1.63□□□□□ -2.15
RTP1YMR185W RPL25P04456 142 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W YML003WP0CF16 290 aa1.63□□□□□ -2.15
RTP1YMR185W GLK1P17709 500 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W ERG4P25340 473 aa1.63□□□□□ -2.15
RTP1YMR185W MSN4P33749 630 aa1.63□□□□□ -2.15
RTP1YMR185W VPS51P36116 164 aa1.63□□□□□ -2.15
RTP1YMR185W ATG8P38182 117 aaRIP-Chip data1.63□□□□□ -2.15not detected
RTP1YMR185W RPP1P38786 293 aa1.63□□□□□ -2.15
RTP1YMR185W TOK1P40310 691 aa1.63□□□□□ -2.15
RTP1YMR185W YIL108WP40483 696 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W YIL060WP40519 144 aa1.63□□□□□ -2.15
RTP1YMR185W EMC5P40540 141 aa1.63□□□□□ -2.15
RTP1YMR185W GNA1P43577 159 aaPredicted RBP1.63□□□□□ -2.15
RTP1YMR185W DAN1P47178 298 aa1.63□□□□□ -2.15
RTP1YMR185W LYS20P48570 428 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W OCA1P50946 238 aaPredicted RBP1.63□□□□□ -2.15
RTP1YMR185W VHT1P53241 593 aa1.63□□□□□ -2.15
RTP1YMR185W SCW4P53334 386 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W GPI15P53961 229 aa1.63□□□□□ -2.15
RTP1YMR185W ARL3Q02804 198 aa1.63□□□□□ -2.15
RTP1YMR185W YDC1Q02896 317 aa1.63□□□□□ -2.15
RTP1YMR185W MRPS17Q03246 237 aaPredicted RBP1.63□□□□□ -2.15
RTP1YMR185W MRPL1Q04599 285 aa1.63□□□□□ -2.15
RTP1YMR185W NAT4Q04751 285 aa1.63□□□□□ -2.15
RTP1YMR185W YMR253CQ04835 414 aa1.63□□□□□ -2.15
RTP1YMR185W HOF1Q05080 669 aa1.63□□□□□ -2.15
RTP1YMR185W TAZ1Q06510 381 aa1.63□□□□□ -2.15
RTP1YMR185W CTR3Q06686 241 aa1.63□□□□□ -2.15
RTP1YMR185W BER1Q06688 274 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W YDL086WQ07505 273 aa1.63□□□□□ -2.15
RTP1YMR185W AIM6Q07716 390 aa1.63□□□□□ -2.15
RTP1YMR185W FDH1Q08911 376 aa1.63□□□□□ -2.15
RTP1YMR185W VPS68Q12016 184 aa1.63□□□□□ -2.15
RTP1YMR185W YPR145C-AQ2V2P0 78 aa1.63□□□□□ -2.15
RTP1YMR185W RPS21BQ3E754 87 aaKnown RBP1.63□□□□□ -2.15
RTP1YMR185W COA6Q3E846 104 aa1.63□□□□□ -2.15
RTP1YMR185W YDR157WA0A023PZE8 133 aa1.62□□□□□ -2.15
RTP1YMR185W YMR084WA2P2R3 262 aa1.62□□□□□ -2.15
RTP1YMR185W GAL4P04386 881 aa1.62□□□□□ -2.15
RTP1YMR185W ADH3P07246 375 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W YKR104WP0CE69 306 aa1.62□□□□□ -2.15
RTP1YMR185W ARF2P19146 181 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W FPR1P20081 114 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W SCL1P21243 252 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W BOS1P25385 244 aa1.62□□□□□ -2.15
RTP1YMR185W IDH2P28241 369 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W FAA1P30624 700 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W PPZ2P33329 710 aa1.62□□□□□ -2.15
RTP1YMR185W MRPS9P38120 278 aa1.62□□□□□ -2.15
RTP1YMR185W FAT1P38225 669 aa1.62□□□□□ -2.15
RTP1YMR185W TRS20P38334 175 aa1.62□□□□□ -2.15
RTP1YMR185W PRS2P38620 318 aaKnown RBP1.62□□□□□ -2.15
RTP1YMR185W PUG1P40100 303 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms